##gff-version 3
HG01258_chrY	CAT	gene	63732	65510	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;alternative_source_transcripts=hg002_chrY_paternal_1.1;gene_id=HG01258_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap;ID=HG01258_ch_G0000001;Name=LOC124905300
HG01258_chrY	CAT	transcript	63732	65510	9910	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG01258_ch_T0000001;Name=LOC124905300
HG01258_chrY	CAT	exon	63732	63761	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01258_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	63732	63761	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01258_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	63732	63734	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG01258_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	63762	63836	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01258_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	63837	64334	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01258_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	63837	64334	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01258_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	64335	64574	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01258_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	64575	64945	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01258_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	64575	64945	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01258_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	64946	65252	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01258_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	65253	65290	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01258_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	65253	65290	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01258_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	65291	65469	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG01258_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	65470	65510	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG01258_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	65470	65510	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG01258_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	65508	65510	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.182;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000001;gene_id=HG01258_ch_G0000001;Parent=HG01258_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG01258_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	69820	91158	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=HG01258_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap;ID=HG01258_ch_G0000002;Name=PLCXD1
HG01258_chrY	CAT	transcript	69820	91158	9990	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG01258_ch_T0000002;Name=PLCXD1
HG01258_chrY	CAT	exon	69820	70122	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	70123	72595	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	72596	72743	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	72617	72743	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	72617	72619	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG01258_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	72744	77103	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	77104	77240	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	77104	77240	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	77241	79019	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79020	79148	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	79020	79148	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79149	79746	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79747	79902	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	79747	79902	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79903	81282	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	81283	81466	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	81283	81466	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	81467	86896	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	86897	91158	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	86897	87135	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	87133	87135	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000002;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG01258_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	69820	91158	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG01258_ch_T0000003;Name=PLCXD1
HG01258_chrY	CAT	exon	69820	70122	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	70123	72595	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	72596	72743	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	72744	77103	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	77104	77240	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	77241	79019	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79020	79148	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79149	79746	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79747	79902	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79903	81282	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	81283	81466	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	81467	86896	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	86897	87579	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	87580	89690	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	89691	91158	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000003;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	71948	91158	9950	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG01258_ch_T0000004;Name=PLCXD1
HG01258_chrY	CAT	exon	71948	72062	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	72063	72595	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	72596	72743	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	72617	72743	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	72617	72619	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG01258_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	72744	77103	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	77104	77240	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	77104	77240	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	77241	79019	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79020	79148	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	79020	79148	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79149	79746	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	79747	79902	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	79747	79902	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	79903	81282	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	81283	81466	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	81283	81466	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	81467	86896	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG01258_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	86897	91158	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG01258_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	86897	87135	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG01258_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	87133	87135	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000004;gene_id=HG01258_ch_G0000002;Parent=HG01258_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG01258_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	92561	109442	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG01258_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000003;Name=GTPBP6
HG01258_chrY	CAT	transcript	92561	107491	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01258_ch_T0000005;Name=GTPBP6
HG01258_chrY	CAT	exon	92561	92999	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	92876	92999	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	92876	92878	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01258_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	93000	95161	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95162	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95162	95314	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95315	95533	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95534	95682	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95534	95682	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95683	99220	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	99221	99429	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	99221	99429	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	99430	100430	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	100431	100829	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	100431	100829	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	100830	102134	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102135	102202	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102135	102202	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	102203	102874	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102875	103005	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102875	103005	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103006	103210	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	103211	103281	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	103211	103228	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	103226	103228	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01258_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103282	107425	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107426	107491	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000005;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	92561	109442	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01258_ch_T0000006;Name=GTPBP6
HG01258_chrY	CAT	exon	92561	92999	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	92876	92999	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	92876	92878	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01258_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	93000	95161	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95162	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95162	95314	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95315	95533	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95534	95682	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95534	95682	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95683	99220	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	99221	99429	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	99221	99429	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	99430	100670	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	100671	100829	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	100671	100829	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	100830	102134	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102135	102202	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102135	102202	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	102203	102874	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102875	103005	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102875	103005	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103006	103210	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	103211	103281	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	103211	103281	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103282	107559	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107560	107697	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	107560	107697	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	107698	109084	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	109085	109442	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	109085	109433	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	109431	109433	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000006;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01258_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	92561	109442	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01258_ch_T0000007;Name=GTPBP6
HG01258_chrY	CAT	exon	92561	92999	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	92876	92999	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	92876	92878	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01258_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	93000	95161	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95162	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95162	95314	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95315	95533	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95534	95682	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95534	95682	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95683	99220	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	99221	99429	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	99221	99429	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	99430	100430	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	100431	100829	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	100431	100829	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	100830	102134	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102135	102202	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102135	102202	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	102203	102874	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102875	103005	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102875	103005	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103006	103210	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	103211	103281	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	103211	103281	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103282	107559	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107560	107697	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	107560	107697	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	107698	109084	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	109085	109442	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	109085	109433	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	109431	109433	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000007;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01258_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	92561	109442	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01258_ch_T0000008;Name=GTPBP6
HG01258_chrY	CAT	exon	92561	92999	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	92876	92999	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	92876	92878	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01258_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	93000	95161	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95162	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95162	95314	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95315	95533	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95534	95682	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95534	95682	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95683	99220	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	99221	99429	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	99221	99429	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	99430	100430	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	100431	100829	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	100431	100829	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	100830	102134	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102135	102202	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102135	102202	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	102203	102874	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102875	103005	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102875	103005	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103006	103210	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	103211	103281	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	103211	103281	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103282	107559	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107560	107697	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	107560	107629	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	107627	107629	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01258_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	107698	107924	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107925	108130	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	108131	109084	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	109085	109442	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000008;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000008:10;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	92561	109442	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG01258_ch_T0000009;Name=GTPBP6
HG01258_chrY	CAT	exon	92561	92999	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	92876	92999	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	92876	92878	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG01258_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	93000	95161	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95162	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95162	95314	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95315	95533	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	95534	95682	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	95534	95682	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	95683	99220	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	99221	99429	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	99221	99429	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	99430	100430	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	100431	100829	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	100431	100829	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	100830	102134	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102135	102202	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102135	102202	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	102203	102874	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	102875	103005	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	102875	103005	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103006	103210	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	103211	103281	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	103211	103281	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	103282	107559	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107560	107697	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	107560	107629	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG01258_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	107627	107629	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG01258_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	107698	107924	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	107925	108065	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	108066	109084	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG01258_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	109085	109442	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000009;gene_id=HG01258_ch_G0000003;Parent=HG01258_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG01258_ch_T0000009:10;Name=GTPBP6;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	109791	111975	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;gene_id=HG01258_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff;ID=HG01258_ch_G0000004;Name=LINC00685
HG01258_chrY	CAT	transcript	109791	111975	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01258_ch_T0000010;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG01258_ch_T0000010;Name=LINC00685
HG01258_chrY	CAT	exon	109791	110194	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01258_ch_T0000010;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01258_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	110195	110850	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01258_ch_T0000010;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG01258_ch_T0000010:0;Name=LINC00685;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	110851	111975	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=HG01258_ch_T0000010;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_T0000010;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01258_ch_T0000010:1;Name=LINC00685;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	109791	111975	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=HG01258_ch_T0000011;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG01258_ch_T0000011;Name=LINC00685
HG01258_chrY	CAT	exon	109791	111975	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=HG01258_ch_T0000011;gene_id=HG01258_ch_G0000004;Parent=HG01258_ch_T0000011;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG01258_ch_T0000011:0;Name=LINC00685;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	128483	183460	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;gene_id=HG01258_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG01258_ch_G0000005;Name=PPP2R3B
HG01258_chrY	CAT	transcript	128483	183460	9980	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG01258_ch_T0000012;Name=PPP2R3B
HG01258_chrY	CAT	exon	128483	129464	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	129403	129464	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	129403	129405	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG01258_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	129465	129522	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	129465	129522	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	129523	132124	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	132125	132231	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	132125	132231	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	132232	132298	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	132299	132417	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	132299	132417	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	132418	134270	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	134271	134446	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	134271	134446	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	134447	134812	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	134813	134902	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	134813	134902	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	134903	135388	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	135389	135437	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	135389	135437	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	135438	138993	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	138994	139150	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	138994	139150	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	139151	139651	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	139652	139738	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	139652	139738	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	139739	140178	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	140179	140253	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	140179	140253	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	140254	140711	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	140712	140814	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	140712	140814	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	140815	141067	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	141068	141171	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	141068	141171	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	141172	155160	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	155161	155346	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	155161	155346	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	155347	182920	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG01258_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	182921	183460	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG01258_ch_T0000012:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	182921	183244	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG01258_ch_T0000012:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	183242	183244	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=299.94100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000012;gene_id=HG01258_ch_G0000005;Parent=HG01258_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG01258_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	227532	271721	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=HG01258_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=HG01258_ch_G0000006;Name=LOC102724521
HG01258_chrY	CAT	transcript	227532	271721	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG01258_ch_T0000013;Name=LOC102724521
HG01258_chrY	CAT	exon	227532	228000	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	228001	231881	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	231882	232139	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	232140	233624	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	233625	233739	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	233740	235657	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	235658	235824	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	235825	239263	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	239264	239336	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	239337	239569	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	239570	239874	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:5;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	239875	258409	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:5;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	258410	259022	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:6;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	259023	268472	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:6;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	268473	268593	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:7;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	268594	269676	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:7;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	269677	269875	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:8;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	269876	270481	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000013:8;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	270482	271721	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG01258_ch_T0000013;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000013;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000013:9;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	227776	241346	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG01258_ch_T0000014;Name=LOC102724521
HG01258_chrY	CAT	exon	227776	228000	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	228001	231881	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000014:0;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	231882	232139	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	232140	233624	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000014:1;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	233625	233739	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	233740	235657	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000014:2;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	235658	235824	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	235825	239786	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000014:3;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	239787	239874	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	239875	240661	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG01258_ch_T0000014:4;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	240662	241346	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG01258_ch_T0000014;gene_id=HG01258_ch_G0000006;Parent=HG01258_ch_T0000014;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG01258_ch_T0000014:5;Name=LOC102724521;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	434219	454820	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;gene_id=HG01258_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG01258_ch_G0000007;Name=SHOX
HG01258_chrY	CAT	transcript	434219	454820	9940	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG01258_ch_T0000015;Name=SHOX
HG01258_chrY	CAT	exon	434219	434602	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	434326	434602	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01258_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	434326	434328	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG01258_ch_T0000015;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	434603	438045	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:0;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	438046	438254	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	438046	438254	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01258_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	438255	444055	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:1;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	444056	444113	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	444056	444113	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01258_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	444114	444233	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:2;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	444234	444322	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	444234	444322	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01258_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	444323	447625	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:3;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	447626	450677	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	447626	447871	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG01258_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	447869	447871	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG01258_ch_T0000015;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	450678	450759	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:4;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	450760	450841	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:5;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	450842	450923	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG01258_ch_T0000015:5;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	450924	454820	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG01258_ch_T0000015;gene_id=HG01258_ch_G0000007;Parent=HG01258_ch_T0000015;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG01258_ch_T0000015:6;Name=SHOX;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1009740	1032422	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG01258_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000008;Name=CRLF2
HG01258_chrY	CAT	transcript	1009740	1032422	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01258_ch_T0000016;Name=CRLF2
HG01258_chrY	CAT	exon	1009740	1010410	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1010147	1010410	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1010147	1010149	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01258_ch_T0000016;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1010411	1012459	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1012460	1012544	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1012460	1012544	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1012545	1016024	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1016025	1016145	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1016025	1016145	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1016146	1018305	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1018306	1018468	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1018306	1018468	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1018469	1022144	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1022145	1022278	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1022145	1022278	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1022279	1026200	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1026201	1026367	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1026201	1026213	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000016:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1026211	1026213	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01258_ch_T0000016;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1026368	1032328	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000016:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1032329	1032422	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000016;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000016;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000016:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1009740	1032422	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01258_ch_T0000017;Name=CRLF2
HG01258_chrY	CAT	exon	1009740	1010410	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1010147	1010410	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1010147	1010149	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01258_ch_T0000017;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1010411	1012459	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1012460	1012544	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1012460	1012544	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1012545	1016024	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1016025	1016145	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1016025	1016145	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1016146	1018305	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1018306	1018468	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1018306	1018468	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1018469	1022144	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1022145	1022278	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1022145	1022278	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1022279	1026200	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1026201	1026367	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1026201	1026367	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1026368	1028573	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1028574	1028676	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1028574	1028676	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1028677	1032328	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000017:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1032329	1032422	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000017:7;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1032329	1032407	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000017:7;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1032405	1032407	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000017;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000017;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01258_ch_T0000017;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1009740	1032422	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG01258_ch_T0000018;Name=CRLF2
HG01258_chrY	CAT	exon	1009740	1010410	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1010147	1010410	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1010147	1010149	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG01258_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1010411	1012459	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1012460	1012544	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1012460	1012544	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1012545	1016024	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1016025	1016145	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1016025	1016145	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1016146	1018305	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1018306	1018468	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1018306	1018468	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1018469	1022144	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1022145	1022278	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1022145	1022278	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1022279	1026200	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1026201	1026367	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1026201	1026367	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1026368	1028573	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1028574	1028673	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1028574	1028673	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1028674	1032328	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG01258_ch_T0000018:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1032329	1032422	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG01258_ch_T0000018:7;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1032329	1032407	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG01258_ch_T0000018:7;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1032405	1032407	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000018;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000018;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG01258_ch_T0000018;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1009740	1032422	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG01258_ch_T0000019;Name=CRLF2
HG01258_chrY	CAT	exon	1009740	1010410	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1010411	1012459	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:0;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1012460	1012544	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1012545	1016024	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:1;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1016025	1016145	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1016146	1018550	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:2;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1018551	1018895	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1018896	1022144	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:3;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1022145	1022278	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1022279	1026200	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:4;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1026201	1026367	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1026368	1028573	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:5;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1028574	1028673	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1028674	1032328	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG01258_ch_T0000019:6;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1032329	1032422	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000019;gene_id=HG01258_ch_G0000008;Parent=HG01258_ch_T0000019;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG01258_ch_T0000019:7;Name=CRLF2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1088924	1149311	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG01258_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000009;Name=CSF2RA
HG01258_chrY	CAT	transcript	1088924	1130095	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000020;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000020;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1129781	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000020:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129782	1130095	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000020:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129782	1129889	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000020:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129887	1129889	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000020;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000020;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000020;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000021;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000021;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127074	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127075	1127176	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127075	1127176	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127177	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000021:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000021:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000021:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000021;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000021;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000021;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000022;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127074	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127075	1127176	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127075	1127176	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127177	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000022:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000022:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000022:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000022;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000022;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000022;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000023;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000023:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000023:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000023;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000023;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000023;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000024;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096716	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096717	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000024:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000024:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000024:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000024;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000024;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000024;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000025;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000025:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000025:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000025:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000025;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000025;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000025;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000026;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116543	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116544	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116544	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1122814	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1122815	1122877	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1122815	1122877	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1122878	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000026;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000027;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1092768	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1092769	1092890	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1092891	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000027;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000027:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000028;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000028;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000029;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000029;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000030;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000030:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000030;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1130095	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000031;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1129781	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129782	1130095	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000031:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129782	1129889	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129887	1129889	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000031;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000032;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000032:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000032;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1146732	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000033;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146531	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146532	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146532	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146732	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000033:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146655	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146653	1146655	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000033;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1146909	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000034;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146909	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000034:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146777	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146775	1146777	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000034;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1146909	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000035;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146909	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000035:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146777	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146775	1146777	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000035;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1146909	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000036;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146909	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000036:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146777	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146775	1146777	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000036;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000037;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146531	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146532	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146532	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146574	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000037;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000038;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146554	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146552	1146554	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000038;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000039;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146554	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146552	1146554	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000039;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000040;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146531	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146532	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146532	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146574	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000040;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000041;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000041;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000042;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133982	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133980	1133982	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000042;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000043;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146531	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146532	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146532	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146574	1146576	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000043;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1147191	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000044;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146531	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146532	1147191	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000044;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1149311	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000045;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1136656	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1136657	1136763	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1136657	1136725	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1136723	1136725	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1136764	1149120	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1149121	1149311	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000045;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000045:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1149311	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000046;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1149120	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1149121	1149311	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1149121	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1149154	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000046;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1149311	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000047;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1149120	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1149121	1149311	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1149121	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1149154	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000047;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1149311	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000048;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1149120	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1149121	1149311	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000048;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1149311	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000049;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1149120	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1149121	1149311	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1149121	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1149154	1149156	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000049;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000050;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000050;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000051;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129655	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1129653	1129655	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000051;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000052;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104398	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104399	1104550	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104551	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000052:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000052;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000053;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096770	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096771	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127074	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127075	1127176	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127075	1127176	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127177	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000053:13;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000053;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000054;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110926	1110999	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1110926	1110928	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1133795	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1133870	1133872	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000054;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1088924	1134328	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG01258_ch_T0000055;Name=CSF2RA
HG01258_chrY	CAT	exon	1088924	1088989	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1088990	1096706	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1096707	1096794	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1096795	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1133794	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1133795	1134328	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000055;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000055;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1104226	1146909	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000056;Name=CSF2RA
HG01258_chrY	CAT	exon	1104226	1104550	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104551	1104667	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1104668	1104769	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1104694	1104769	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1104694	1104696	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1104770	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108182	1108324	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146909	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000056:12;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146777	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146775	1146777	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000056;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1104793	1146913	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG01258_ch_T0000057;Name=CSF2RA
HG01258_chrY	CAT	exon	1104793	1105032	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1105033	1108181	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1108182	1108324	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1108238	1108324	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1108238	1108240	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG01258_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1108325	1110629	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110630	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110630	1110753	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1110754	1110869	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1110870	1110999	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1110870	1110999	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1111000	1112447	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1112448	1112620	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1112448	1112620	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1112621	1116524	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1116525	1116658	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1116525	1116658	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1116659	1118052	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1118053	1118082	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1118053	1118082	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1118083	1124302	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1124303	1124438	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1124303	1124438	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1124439	1127736	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1127737	1127833	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1127737	1127833	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1127834	1129599	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1129600	1129681	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1129600	1129681	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1129682	1146527	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146528	1146550	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146528	1146550	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1146551	1146638	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG01258_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1146639	1146913	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG01258_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1146639	1146777	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG01258_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1146775	1146777	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000057;gene_id=HG01258_ch_G0000009;Parent=HG01258_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG01258_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1115654	1116106	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=HG01258_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000010;Name=LOC124905238
HG01258_chrY	CAT	transcript	1115654	1116106	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000058;gene_id=HG01258_ch_G0000010;Parent=HG01258_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG01258_ch_T0000058;Name=LOC124905238
HG01258_chrY	CAT	exon	1115654	1115690	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000058;gene_id=HG01258_ch_G0000010;Parent=HG01258_ch_T0000058;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG01258_ch_T0000058:0;Name=LOC124905238;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1115691	1115950	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000058;gene_id=HG01258_ch_G0000010;Parent=HG01258_ch_T0000058;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG01258_ch_T0000058:0;Name=LOC124905238;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1115951	1116106	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000058;gene_id=HG01258_ch_G0000010;Parent=HG01258_ch_T0000058;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG01258_ch_T0000058:1;Name=LOC124905238;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1115723	1115754	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG01258_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG01258_ch_G0000011;Name=MIR3690
HG01258_chrY	CAT	transcript	1115723	1115797	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG01258_ch_T0000059;gene_id=HG01258_ch_G0000011;Parent=HG01258_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG01258_ch_T0000059;Name=MIR3690
HG01258_chrY	CAT	exon	1115723	1115797	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG01258_ch_T0000059;gene_id=HG01258_ch_G0000011;Parent=HG01258_ch_T0000059;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG01258_ch_T0000059:0;Name=MIR3690;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1115732	1115754	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG01258_ch_T0000060;gene_id=HG01258_ch_G0000011;Parent=HG01258_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG01258_ch_T0000060;Name=MIR3690
HG01258_chrY	CAT	exon	1115732	1115754	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG01258_ch_T0000060;gene_id=HG01258_ch_G0000011;Parent=HG01258_ch_T0000060;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG01258_ch_T0000060:0;Name=MIR3690;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1116026	1116057	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=HG01258_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG01258_ch_G0000012;Name=MIR3690
HG01258_chrY	CAT	transcript	1116026	1116100	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG01258_ch_T0000061;gene_id=HG01258_ch_G0000012;Parent=HG01258_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG01258_ch_T0000061;Name=MIR3690
HG01258_chrY	CAT	exon	1116026	1116100	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG01258_ch_T0000061;gene_id=HG01258_ch_G0000012;Parent=HG01258_ch_T0000061;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG01258_ch_T0000061:0;Name=MIR3690;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1116035	1116057	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG01258_ch_T0000062;gene_id=HG01258_ch_G0000012;Parent=HG01258_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG01258_ch_T0000062;Name=MIR3690
HG01258_chrY	CAT	exon	1116035	1116057	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG01258_ch_T0000062;gene_id=HG01258_ch_G0000012;Parent=HG01258_ch_T0000062;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG01258_ch_T0000062:0;Name=MIR3690;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1161627	1200864	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG01258_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000013;Name=IL3RA
HG01258_chrY	CAT	transcript	1161627	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000063;Name=IL3RA
HG01258_chrY	CAT	exon	1161627	1161768	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1161769	1166569	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166570	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166608	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166608	1166610	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000063;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177173	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177174	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177174	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000063:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000063:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000063:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000063;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000063;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000063;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1161627	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000064;Name=IL3RA
HG01258_chrY	CAT	exon	1161627	1161768	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1161769	1166569	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166570	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166608	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166608	1166610	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000064;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177173	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177174	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177174	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000064:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000064:11;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000064:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000064;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000064;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000064;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1161627	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000065;Name=IL3RA
HG01258_chrY	CAT	exon	1161627	1161768	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1161769	1166572	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166573	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166608	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166608	1166610	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000065;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177173	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177174	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177174	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000065:11;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000065:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000065;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000065;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000065;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1161627	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000066;Name=IL3RA
HG01258_chrY	CAT	exon	1161627	1161768	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1161769	1166569	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166570	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166608	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166608	1166610	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000066;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177176	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177177	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177177	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000066:11;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000066:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000066;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000066;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000066;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1161627	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000067;Name=IL3RA
HG01258_chrY	CAT	exon	1161627	1161768	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1161769	1166572	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166573	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166608	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166608	1166610	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177176	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177177	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177177	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000067:11;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000067:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000067;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000067;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000067;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1166424	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000069;Name=IL3RA
HG01258_chrY	CAT	exon	1166424	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166428	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166428	1166430	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177173	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177174	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177174	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000069:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000069:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000069;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1166424	1200864	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG01258_ch_T0000070;Name=IL3RA
HG01258_chrY	CAT	exon	1166424	1166671	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1166428	1166671	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1166428	1166430	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG01258_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166672	1170158	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1170159	1170277	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1170159	1170277	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1170278	1173275	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1173276	1173390	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1173276	1173390	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1173391	1176951	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1176952	1177084	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1176952	1177084	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177085	1177176	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177177	1177358	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1177177	1177358	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177359	1180998	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180999	1181114	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1180999	1181114	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1181115	1183638	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1183639	1183665	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1183639	1183665	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1183666	1190000	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1190001	1190115	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1190001	1190115	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190116	1196771	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196772	1196877	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1196772	1196877	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1196878	1199155	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1199156	1199237	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1199156	1199237	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1199238	1200564	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG01258_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1200565	1200864	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG01258_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1200565	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG01258_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1200637	1200639	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000070;gene_id=HG01258_ch_G0000013;Parent=HG01258_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG01258_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1162416	1196589	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;alternative_source_transcripts=hg002_chrY_paternal_21.11;gene_id=HG01258_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000014;Name=LOC101928032
HG01258_chrY	CAT	transcript	1162416	1196589	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01258_ch_T0000068;Name=LOC101928032
HG01258_chrY	CAT	exon	1162416	1163631	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1163632	1166439	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1166440	1166655	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1166656	1177161	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177162	1177570	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177571	1180349	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180350	1180918	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1180919	1186230	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1186231	1186609	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1186610	1189965	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1189966	1190034	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190035	1192586	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1192587	1192721	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1192722	1196434	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000068:6;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196435	1196589	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.902;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000068;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000068;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000068:7;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1175618	1196589	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG01258_ch_T0000071;Name=LOC101928032
HG01258_chrY	CAT	exon	1175618	1175704	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1175705	1177161	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000071:0;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1177162	1177570	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1177571	1180349	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000071:1;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1180350	1180918	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1180919	1189965	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000071:2;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1189966	1190034	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1190035	1192586	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000071:3;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1192587	1192721	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1192722	1196434	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG01258_ch_T0000071:4;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1196435	1196589	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000071;gene_id=HG01258_ch_G0000014;Parent=HG01258_ch_T0000071;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG01258_ch_T0000071:5;Name=LOC101928032;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1204317	1210398	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG01258_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000015;Name=SLC25A6
HG01258_chrY	CAT	transcript	1204317	1210398	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG01258_ch_T0000072;Name=SLC25A6
HG01258_chrY	CAT	exon	1204317	1204924	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01258_ch_T0000072:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1204767	1204924	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01258_ch_T0000072:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1204767	1204769	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG01258_ch_T0000072;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1204925	1205443	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01258_ch_T0000072:0;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1205444	1205584	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01258_ch_T0000072:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1205444	1205584	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01258_ch_T0000072:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1205585	1207405	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01258_ch_T0000072:1;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1207406	1207892	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01258_ch_T0000072:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1207406	1207892	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01258_ch_T0000072:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1207893	1210183	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG01258_ch_T0000072:2;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1210184	1210398	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG01258_ch_T0000072:3;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1210184	1210294	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG01258_ch_T0000072:3;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1210292	1210294	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000072;gene_id=HG01258_ch_G0000015;Parent=HG01258_ch_T0000072;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG01258_ch_T0000072;Name=SLC25A6;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1210278	1215171	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG01258_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000016;Name=LOC105373102
HG01258_chrY	CAT	transcript	1210278	1215171	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG01258_ch_T0000073;Name=LOC105373102
HG01258_chrY	CAT	exon	1210278	1210626	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000073:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1210278	1210626	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01258_ch_T0000073:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1210278	1210280	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG01258_ch_T0000073;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1210627	1213419	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG01258_ch_T0000073:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1213420	1213838	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000073:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1213420	1213838	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01258_ch_T0000073:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1213839	1214661	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG01258_ch_T0000073:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1214662	1215171	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000073:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1214662	1214682	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG01258_ch_T0000073:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1214680	1214682	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000073;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000073;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG01258_ch_T0000073;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1210278	1215171	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG01258_ch_T0000074;Name=LOC105373102
HG01258_chrY	CAT	exon	1210278	1210626	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000074:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1210627	1213419	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01258_ch_T0000074:0;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1213420	1213838	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000074:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1213839	1214661	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01258_ch_T0000074:1;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1214662	1214805	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000074:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1214806	1214899	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG01258_ch_T0000074:2;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1214900	1215171	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000074;gene_id=HG01258_ch_G0000016;Parent=HG01258_ch_T0000074;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG01258_ch_T0000074:3;Name=LOC105373102;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1215315	1217702	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG01258_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG01258_ch_G0000017;Name=LINC00106
HG01258_chrY	CAT	transcript	1215315	1217702	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG01258_ch_T0000075;Name=LINC00106
HG01258_chrY	CAT	exon	1215315	1215514	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_T0000075;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01258_ch_T0000075:0;Name=LINC00106;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1215515	1217114	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_T0000075;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG01258_ch_T0000075:0;Name=LINC00106;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1217115	1217248	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_T0000075;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01258_ch_T0000075:1;Name=LINC00106;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1217249	1217656	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_T0000075;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG01258_ch_T0000075:1;Name=LINC00106;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1217657	1217702	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG01258_ch_T0000075;gene_id=HG01258_ch_G0000017;Parent=HG01258_ch_T0000075;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG01258_ch_T0000075:2;Name=LINC00106;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1218817	1231544	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG01258_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG01258_ch_G0000018;Name=ASMTL-AS1
HG01258_chrY	CAT	transcript	1218817	1229687	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG01258_ch_T0000076;Name=ASMTL-AS1
HG01258_chrY	CAT	exon	1218817	1218872	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000076:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1218873	1219747	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000076:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1219748	1220511	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000076:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1220512	1221668	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000076:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1221669	1221793	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000076:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221794	1228842	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000076:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228843	1229687	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG01258_ch_T0000076;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000076;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000076:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1218817	1231544	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG01258_ch_T0000077;Name=ASMTL-AS1
HG01258_chrY	CAT	exon	1218817	1218872	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1218873	1219747	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000077:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1219748	1220511	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1220512	1221668	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000077:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1221669	1221793	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221794	1228842	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000077:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228843	1228988	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228989	1229862	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000077:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1229863	1230411	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1230412	1230843	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG01258_ch_T0000077:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1230844	1231544	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG01258_ch_T0000077;gene_id=HG01258_ch_G0000018;Parent=HG01258_ch_T0000077;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG01258_ch_T0000077:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1221347	1269918	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;gene_id=HG01258_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000019;Name=ASMTL
HG01258_chrY	CAT	transcript	1221347	1252542	100	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000078;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000078;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252087	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1252384	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252385	1252542	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000078:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252385	1252408	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000078:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1252406	1252408	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000078;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000078;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000078;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1255885	100	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000079;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000079;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252033	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1252031	1252033	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000079;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1255723	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000079:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255724	1255885	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000079;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000079;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000079:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269068	100	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000080;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000080;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252087	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258646	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1268906	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1268907	1269068	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000080:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1268907	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000080:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1268997	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000080;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000080;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000080;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269068	100	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000081;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000081;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252087	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1255426	1255473	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258646	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1268906	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1268907	1269068	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000081:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1268907	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000081:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1268997	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000081;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000081;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000081;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269068	100	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000082;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000082;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1255426	1255473	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258576	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1258574	1258576	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000082;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1268906	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1268907	1269068	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000082;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000082;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000082:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269918	100	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000083;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000083;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252087	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1255426	1255473	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258565	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000083:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1258563	1258565	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000083;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1269776	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000083:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1269777	1269918	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000083;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000083;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000083:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269918	100	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000084;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000084;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1252022	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1252023	1252087	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1252023	1252087	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1252088	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1255426	1255473	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258646	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1268906	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1268907	1269065	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1268907	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000084:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1268997	1268999	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000084;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1269066	1269776	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000084:12;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1269777	1269918	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000084;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000084:13;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1221347	1269918	100	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG01258_ch_T0000085;Name=ASMTL
HG01258_chrY	CAT	exon	1221347	1221697	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1221477	1221697	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1221477	1221479	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG01258_ch_T0000085;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1221698	1228831	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1228832	1228954	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1228832	1228954	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1228955	1234062	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1234063	1234206	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1234063	1234206	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1234207	1235071	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1235072	1235204	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1235072	1235204	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1235205	1237747	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1237748	1237932	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1237748	1237932	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1237933	1241567	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1241568	1241730	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1241568	1241730	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1241731	1243780	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1243781	1244168	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1243781	1244168	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1244169	1248326	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1248327	1248435	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1248327	1248435	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1248436	1251350	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1251351	1251412	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1251351	1251412	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1251413	1255425	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1255426	1255473	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1255426	1255473	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1255474	1258514	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1258515	1258646	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1258515	1258576	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG01258_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1258574	1258576	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG01258_ch_T0000085;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1258647	1269776	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG01258_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1269777	1269918	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000085;gene_id=HG01258_ch_G0000019;Parent=HG01258_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG01258_ch_T0000085:11;Name=ASMTL;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1279068	1353809	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG01258_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000020;Name=P2RY8
HG01258_chrY	CAT	transcript	1279068	1284208	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01258_ch_T0000086;Name=P2RY8
HG01258_chrY	CAT	exon	1279068	1283067	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000086:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1281964	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01258_ch_T0000086:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1281964	1281966	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01258_ch_T0000086;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1283041	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01258_ch_T0000086;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1283068	1283512	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000086:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1283513	1284208	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000086;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000086;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000086:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1279068	1309979	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01258_ch_T0000087;Name=P2RY8
HG01258_chrY	CAT	exon	1279068	1283067	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1281964	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01258_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1281964	1281966	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01258_ch_T0000087;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1283041	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01258_ch_T0000087;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1283068	1309924	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1309925	1309979	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000087;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000087:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1279068	1311613	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01258_ch_T0000088;Name=P2RY8
HG01258_chrY	CAT	exon	1279068	1283067	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1281964	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01258_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1281964	1281966	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01258_ch_T0000088;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1283041	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01258_ch_T0000088;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1283068	1310996	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1310997	1311613	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000088;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000088:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1279068	1353809	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01258_ch_T0000089;Name=P2RY8
HG01258_chrY	CAT	exon	1279068	1283067	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1281964	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01258_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1281964	1281966	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01258_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1283041	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01258_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1283068	1353544	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1353545	1353809	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000089;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000089:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1279068	1353809	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG01258_ch_T0000090;Name=P2RY8
HG01258_chrY	CAT	exon	1279068	1283067	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1281964	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG01258_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1281964	1281966	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG01258_ch_T0000090;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1283041	1283043	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG01258_ch_T0000090;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1283068	1284987	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1284988	1285156	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000090:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1285157	1353544	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG01258_ch_T0000090:1;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1353545	1353809	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000090;gene_id=HG01258_ch_G0000020;Parent=HG01258_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG01258_ch_T0000090:2;Name=P2RY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1408665	1419487	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG01258_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000021;Name=AKAP17A
HG01258_chrY	CAT	transcript	1408665	1419487	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG01258_ch_T0000091;Name=AKAP17A
HG01258_chrY	CAT	exon	1408665	1408830	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000091:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1408831	1410503	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000091:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1410504	1411284	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000091:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1410523	1411284	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01258_ch_T0000091:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1410523	1410525	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG01258_ch_T0000091;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1411285	1412415	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000091:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1412416	1412564	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000091:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1412416	1412564	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01258_ch_T0000091:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1412565	1416158	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000091:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1416159	1416399	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000091:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1416159	1416399	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01258_ch_T0000091:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1416400	1417625	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000091:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1417626	1419487	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000091:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1417626	1418561	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG01258_ch_T0000091:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1418559	1418561	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000091;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000091;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG01258_ch_T0000091;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1408665	1419487	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG01258_ch_T0000092;Name=AKAP17A
HG01258_chrY	CAT	exon	1408665	1408830	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1408831	1410503	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1410504	1411284	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1411285	1412415	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1412416	1412564	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1412565	1416158	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1416159	1416399	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1416400	1417104	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1417105	1417174	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1417175	1417625	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG01258_ch_T0000092:4;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1417626	1419487	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000092;gene_id=HG01258_ch_G0000021;Parent=HG01258_ch_T0000092;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG01258_ch_T0000092:5;Name=AKAP17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1412487	1455736	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG01258_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000022;Name=ASMT
HG01258_chrY	CAT	transcript	1412487	1455736	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01258_ch_T0000093;Name=ASMT
HG01258_chrY	CAT	exon	1412487	1412564	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1412565	1431746	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1431747	1431882	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1431814	1431882	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1431814	1431816	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01258_ch_T0000093;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1431883	1439752	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1439753	1439927	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1439753	1439927	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1439928	1440882	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1440883	1441012	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1440883	1441012	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1441013	1444222	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1444223	1444291	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1444223	1444291	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1444292	1446340	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1446341	1446459	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1446341	1446459	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1446460	1449226	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1449227	1449310	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1449227	1449310	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1449311	1449671	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1449672	1449812	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1449672	1449812	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1449813	1452959	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1452960	1453082	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:8;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1452960	1453082	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1453083	1455457	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000093:8;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1455458	1455736	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000093:9;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1455458	1455669	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000093:8;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1455667	1455669	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000093;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000093;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01258_ch_T0000093;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1431673	1455736	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01258_ch_T0000094;Name=ASMT
HG01258_chrY	CAT	exon	1431673	1431882	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1431814	1431882	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1431814	1431816	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01258_ch_T0000094;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1431883	1439752	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1439753	1439927	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1439753	1439927	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1439928	1440882	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1440883	1441012	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1440883	1441012	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1441013	1444222	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1444223	1444291	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1444223	1444291	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1444292	1446340	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1446341	1446459	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1446341	1446459	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1446460	1449226	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1449227	1449310	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1449227	1449310	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1449311	1449671	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1449672	1449812	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1449672	1449812	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1449813	1452959	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1452960	1453082	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1452960	1453082	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1453083	1455457	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1455458	1455736	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000094:8;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1455458	1455669	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000094:8;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1455667	1455669	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000094;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01258_ch_T0000094;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1431747	1455736	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG01258_ch_T0000095;Name=ASMT
HG01258_chrY	CAT	exon	1431747	1431882	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1431814	1431882	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	1431814	1431816	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG01258_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1431883	1439752	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1439753	1439927	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1439753	1439927	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1439928	1440882	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1440883	1441012	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1440883	1441012	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1441013	1444222	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1444223	1444291	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1444223	1444291	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1444292	1446340	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1446341	1446459	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1446341	1446459	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1446460	1452959	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1452960	1453082	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1452960	1453082	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1453083	1455457	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG01258_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1455458	1455736	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG01258_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1455458	1455669	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG01258_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1455667	1455669	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000095;gene_id=HG01258_ch_G0000022;Parent=HG01258_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG01258_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1546278	1570201	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG01258_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG01258_ch_G0000023;Name=LINC02968
HG01258_chrY	CAT	transcript	1546278	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000096;Name=LINC02968
HG01258_chrY	CAT	exon	1546278	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547812	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547813	1548056	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548057	1557699	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557700	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000096:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG01258_ch_T0000096;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000096;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000096:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1546332	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000097;Name=LINC02968
HG01258_chrY	CAT	exon	1546332	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547809	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547810	1548071	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548072	1556149	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1556150	1556245	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1556246	1557502	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557503	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000097:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG01258_ch_T0000097;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000097:7;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1546415	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000098;Name=LINC02968
HG01258_chrY	CAT	exon	1546415	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547809	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547810	1548056	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548057	1556149	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1556150	1556245	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1556246	1557699	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557700	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000098:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG01258_ch_T0000098;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000098:7;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1546415	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000099;Name=LINC02968
HG01258_chrY	CAT	exon	1546415	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547809	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547810	1548056	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548057	1556149	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1556150	1556245	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1556246	1557696	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557697	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000099:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG01258_ch_T0000099;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000099:7;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1546415	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000100;Name=LINC02968
HG01258_chrY	CAT	exon	1546415	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547812	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547813	1548056	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548057	1556149	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1556150	1556245	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1556246	1557699	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557700	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000100:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG01258_ch_T0000100;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000100:7;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1546415	1570201	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG01258_ch_T0000101;Name=LINC02968
HG01258_chrY	CAT	exon	1546415	1546582	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1546583	1547809	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1547810	1548056	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1548057	1556149	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1556150	1556245	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1556246	1557807	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:2;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1557808	1557913	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1557914	1558006	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:3;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1558007	1558791	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1558792	1561508	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:4;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1561509	1561760	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1561761	1565503	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:5;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1565504	1565563	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1565564	1569900	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG01258_ch_T0000101:6;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1569901	1570201	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG01258_ch_T0000101;gene_id=HG01258_ch_G0000023;Parent=HG01258_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG01258_ch_T0000101:7;Name=LINC02968;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1584372	1597890	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG01258_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG01258_ch_G0000024;Name=LOC105379413
HG01258_chrY	CAT	transcript	1584372	1597890	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG01258_ch_T0000102;Name=LOC105379413
HG01258_chrY	CAT	exon	1584372	1584948	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000102;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000102:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1584949	1589615	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000102;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01258_ch_T0000102:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1589616	1589829	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000102;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000102:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1589830	1594760	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000102;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01258_ch_T0000102:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1594761	1597890	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG01258_ch_T0000102;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000102;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000102:2;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	1584372	1597890	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG01258_ch_T0000103;Name=LOC105379413
HG01258_chrY	CAT	exon	1584372	1584948	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000103:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1584949	1589615	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01258_ch_T0000103:0;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1589616	1589778	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000103:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1589779	1594760	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG01258_ch_T0000103:1;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1594761	1597890	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG01258_ch_T0000103;gene_id=HG01258_ch_G0000024;Parent=HG01258_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG01258_ch_T0000103:2;Name=LOC105379413;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1693852	1700160	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG01258_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG01258_ch_G0000025;Name=LOC107985677
HG01258_chrY	CAT	transcript	1693852	1700160	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG01258_ch_T0000104;Name=LOC107985677
HG01258_chrY	CAT	exon	1693852	1694910	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:0;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1694911	1696068	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01258_ch_T0000104:0;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1696069	1696182	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:1;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1696183	1696671	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01258_ch_T0000104:1;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1696672	1696798	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:2;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1696799	1698129	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01258_ch_T0000104:2;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1698130	1698445	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:3;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1698446	1698845	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01258_ch_T0000104:3;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1698846	1699445	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:4;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1699446	1699821	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG01258_ch_T0000104:4;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1699822	1700160	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG01258_ch_T0000104;gene_id=HG01258_ch_G0000025;Parent=HG01258_ch_T0000104;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG01258_ch_T0000104:5;Name=LOC107985677;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1848262	2131730	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG01258_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000026;Name=DHRSX
HG01258_chrY	CAT	transcript	1848262	2131730	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG01258_ch_T0000105;Name=DHRSX
HG01258_chrY	CAT	exon	1848262	1849985	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:0;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1849797	1849985	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:0;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	1849797	1849799	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG01258_ch_T0000105;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1849986	1871519	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:0;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1871520	1871727	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:1;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1871520	1871727	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:1;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1871728	1895247	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:1;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1895248	1895455	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:2;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1895248	1895455	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:2;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1895456	1915561	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:2;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1915562	1915663	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:3;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	1915562	1915663	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:3;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1915664	2039610	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:3;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2039611	2039679	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:4;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2039611	2039679	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:4;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2039680	2056063	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:4;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2056064	2056171	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:5;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2056064	2056171	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:5;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2056172	2131570	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG01258_ch_T0000105:5;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2131571	2131730	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG01258_ch_T0000105:6;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2131571	2131679	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG01258_ch_T0000105:6;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2131677	2131679	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000105;gene_id=HG01258_ch_G0000026;Parent=HG01258_ch_T0000105;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG01258_ch_T0000105;Name=DHRSX;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	1951368	1968417	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG01258_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG01258_ch_G0000027;Name=LOC124905239
HG01258_chrY	CAT	transcript	1951368	1968417	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG01258_ch_T0000106;Name=LOC124905239
HG01258_chrY	CAT	exon	1951368	1952645	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_T0000106;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01258_ch_T0000106:0;Name=LOC124905239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1952646	1960144	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_T0000106;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG01258_ch_T0000106:0;Name=LOC124905239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1960145	1960271	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_T0000106;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01258_ch_T0000106:1;Name=LOC124905239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	1960272	1968250	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_T0000106;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG01258_ch_T0000106:1;Name=LOC124905239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	1968251	1968417	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG01258_ch_T0000106;gene_id=HG01258_ch_G0000027;Parent=HG01258_ch_T0000106;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG01258_ch_T0000106:2;Name=LOC124905239;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2117189	2131730	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG01258_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000028;Name=ZBED1
HG01258_chrY	CAT	transcript	2117189	2131379	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01258_ch_T0000107;Name=ZBED1
HG01258_chrY	CAT	exon	2117189	2121521	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000107:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2119384	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01258_ch_T0000107:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2119384	2119386	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01258_ch_T0000107;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2121466	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01258_ch_T0000107;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2121522	2131064	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01258_ch_T0000107:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2131065	2131379	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000107;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000107;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000107:1;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2117189	2131730	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01258_ch_T0000108;Name=ZBED1
HG01258_chrY	CAT	exon	2117189	2121521	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2119384	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01258_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2119384	2119386	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01258_ch_T0000108;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2121466	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01258_ch_T0000108;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2121522	2131570	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01258_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2131571	2131730	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000108;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000108:1;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2117189	2131730	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG01258_ch_T0000109;Name=ZBED1
HG01258_chrY	CAT	exon	2117189	2121518	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2119384	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG01258_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2119384	2119386	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG01258_ch_T0000109;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2121466	2121468	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG01258_ch_T0000109;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2121519	2131570	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG01258_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2131571	2131730	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000109;gene_id=HG01258_ch_G0000028;Parent=HG01258_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG01258_ch_T0000109:1;Name=ZBED1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2195729	2239299	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG01258_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG01258_ch_G0000029;Name=LOC101928092
HG01258_chrY	CAT	transcript	2195729	2204295	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01258_ch_T0000110;Name=LOC101928092
HG01258_chrY	CAT	exon	2195729	2196992	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000110;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000110:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2196993	2199709	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000110;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000110:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2199710	2199865	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000110;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000110:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2199866	2203757	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000110;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000110:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2203758	2204295	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG01258_ch_T0000110;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000110;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000110:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2195729	2204295	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01258_ch_T0000111;Name=LOC101928092
HG01258_chrY	CAT	exon	2195729	2196992	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000111:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2196993	2199709	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000111:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2199710	2199865	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000111:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2199866	2203774	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000111:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2203775	2204295	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG01258_ch_T0000111;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000111:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2195729	2239231	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01258_ch_T0000112;Name=LOC101928092
HG01258_chrY	CAT	exon	2195729	2196992	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000112:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2196993	2199709	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000112:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2199710	2199865	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000112:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2199866	2239164	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000112:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2239165	2239231	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG01258_ch_T0000112;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000112:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2195729	2239242	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01258_ch_T0000113;Name=LOC101928092
HG01258_chrY	CAT	exon	2195729	2196992	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000113:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2196993	2199709	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000113:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2199710	2199865	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000113:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2199866	2203757	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000113:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2203758	2203951	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000113:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2203952	2239164	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000113:2;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2239165	2239242	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG01258_ch_T0000113;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000113:3;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2195729	2239299	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01258_ch_T0000114;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG01258_ch_T0000114;Name=LOC101928092
HG01258_chrY	CAT	exon	2195729	2196992	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01258_ch_T0000114;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000114:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2196993	2239164	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01258_ch_T0000114;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG01258_ch_T0000114:0;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2239165	2239299	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG01258_ch_T0000114;gene_id=HG01258_ch_G0000029;Parent=HG01258_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG01258_ch_T0000114:1;Name=LOC101928092;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2239250	2239311	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG01258_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG01258_ch_G0000030;Name=MIR6089
HG01258_chrY	CAT	transcript	2239250	2239313	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG01258_ch_T0000115;gene_id=HG01258_ch_G0000030;Parent=HG01258_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG01258_ch_T0000115;Name=MIR6089
HG01258_chrY	CAT	exon	2239250	2239313	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG01258_ch_T0000115;gene_id=HG01258_ch_G0000030;Parent=HG01258_ch_T0000115;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG01258_ch_T0000115:0;Name=MIR6089;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2239288	2239311	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG01258_ch_T0000116;gene_id=HG01258_ch_G0000030;Parent=HG01258_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG01258_ch_T0000116;Name=MIR6089
HG01258_chrY	CAT	exon	2239288	2239311	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG01258_ch_T0000116;gene_id=HG01258_ch_G0000030;Parent=HG01258_ch_T0000116;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG01258_ch_T0000116:0;Name=MIR6089;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2239324	2288134	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG01258_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG01258_ch_G0000031;Name=CD99P1
HG01258_chrY	CAT	transcript	2239324	2269234	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG01258_ch_T0000117;Name=CD99P1
HG01258_chrY	CAT	exon	2239324	2239540	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:0;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2239541	2241057	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:0;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2241058	2241100	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:1;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2241101	2242203	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:1;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2242204	2242272	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:2;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2242273	2245869	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:2;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2245870	2246023	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:3;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2246024	2248787	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:3;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2248788	2248832	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:4;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2248833	2249476	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:4;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2249477	2249545	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:5;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2249546	2252740	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:5;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2252741	2252785	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:6;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2252786	2253435	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:6;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2253436	2253504	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:7;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2253505	2256649	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:7;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2256650	2256695	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:8;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2256696	2268878	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000117:8;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2268879	2269234	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG01258_ch_T0000117;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000117;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000117:9;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2239324	2288134	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG01258_ch_T0000118;Name=CD99P1
HG01258_chrY	CAT	exon	2239324	2239540	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:0;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2239541	2241057	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:0;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2241058	2241100	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:1;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2241101	2242203	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:1;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2242204	2242272	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:2;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2242273	2245869	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:2;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2245870	2246023	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:3;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2246024	2248787	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:3;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2248788	2248832	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:4;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2248833	2249476	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:4;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2249477	2249545	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:5;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2249546	2253435	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:5;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2253436	2253504	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:6;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2253505	2256649	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:6;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2256650	2256695	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:7;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2256696	2285931	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG01258_ch_T0000118:7;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2285932	2288134	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG01258_ch_T0000118;gene_id=HG01258_ch_G0000031;Parent=HG01258_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG01258_ch_T0000118:8;Name=CD99P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2243045	2245401	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG01258_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG01258_ch_G0000032;Name=LINC00102
HG01258_chrY	CAT	transcript	2243045	2245401	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01258_ch_T0000119;gene_id=HG01258_ch_G0000032;Parent=HG01258_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG01258_ch_T0000119;Name=LINC00102
HG01258_chrY	CAT	exon	2243045	2243750	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01258_ch_T0000119;gene_id=HG01258_ch_G0000032;Parent=HG01258_ch_T0000119;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG01258_ch_T0000119:0;Name=LINC00102;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2243751	2244770	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01258_ch_T0000119;gene_id=HG01258_ch_G0000032;Parent=HG01258_ch_T0000119;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG01258_ch_T0000119:0;Name=LINC00102;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2244771	2245401	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG01258_ch_T0000119;gene_id=HG01258_ch_G0000032;Parent=HG01258_ch_T0000119;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG01258_ch_T0000119:1;Name=LINC00102;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2322093	2372109	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG01258_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000033;Name=CD99
HG01258_chrY	CAT	transcript	2322093	2367236	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000120;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000120;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2348402	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2348403	2348450	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2348403	2348450	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2348451	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2354112	2354162	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2364155	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000120:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2364156	2367236	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000120:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2364156	2364163	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000120:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2364161	2364163	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000120;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000120;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000120;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000121;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000121;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2354112	2354162	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2368999	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369000	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2369000	2369056	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000121:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2371579	2371604	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000121:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2371602	2371604	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000121;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000121;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000122;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000122;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2348402	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2348403	2348450	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2348403	2348450	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2348451	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2354112	2354162	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2369002	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369003	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2369003	2369056	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000122:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000122:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2371579	2371604	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000122:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2371602	2371604	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000122;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000122;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000123;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000123;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2354112	2354162	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2369002	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369003	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2369003	2369056	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000123:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2371579	2371604	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000123:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2371602	2371604	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000123;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000123;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000124;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000124;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2348402	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2348403	2348450	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2348403	2348450	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2348451	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2368999	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369000	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2369000	2369056	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000124:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2371579	2371604	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000124:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2371602	2371604	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000124;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000124;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG01258_ch_T0000125;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2322159	2322225	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2322159	2322161	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG01258_ch_T0000125;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2345220	2345252	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2348402	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2348403	2348450	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2348403	2348450	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2348451	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2350459	2350503	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2351154	2351222	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2353425	2353472	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2354112	2354162	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2357058	2357171	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2368999	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369000	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2369000	2369056	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG01258_ch_T0000125:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG01258_ch_T0000125:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2371579	2371604	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG01258_ch_T0000125:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2371602	2371604	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000125;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG01258_ch_T0000125;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2322093	2372109	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG01258_ch_T0000126;Name=CD99
HG01258_chrY	CAT	exon	2322093	2322225	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2322226	2345219	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:0;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2345220	2345252	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2345253	2348402	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:1;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2348403	2348450	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2348451	2350458	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:2;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2350459	2350503	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2350504	2351153	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:3;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2351154	2351222	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2351223	2353424	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:4;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2353425	2353472	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2353473	2354111	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:5;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2354112	2354162	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2354163	2357057	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:6;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2357058	2357171	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2357172	2364155	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:7;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2364156	2364173	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2364174	2369002	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:8;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2369003	2369056	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2369057	2371578	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG01258_ch_T0000126:9;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2371579	2372109	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000126;gene_id=HG01258_ch_G0000033;Parent=HG01258_ch_T0000126;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG01258_ch_T0000126:10;Name=CD99;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2383102	2405746	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG01258_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG01258_ch_G0000034;Name=XGY2
HG01258_chrY	CAT	transcript	2383102	2405746	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG01258_ch_T0000127;Name=XGY2
HG01258_chrY	CAT	exon	2383102	2383141	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_T0000127;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01258_ch_T0000127:0;Name=XGY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2383142	2401341	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_T0000127;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG01258_ch_T0000127:0;Name=XGY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2401342	2401383	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_T0000127;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01258_ch_T0000127:1;Name=XGY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2401384	2405465	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_T0000127;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG01258_ch_T0000127:1;Name=XGY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2405466	2405746	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG01258_ch_T0000127;gene_id=HG01258_ch_G0000034;Parent=HG01258_ch_T0000127;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG01258_ch_T0000127:2;Name=XGY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2417598	2418425	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG01258_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000035;Name=SRY
HG01258_chrY	CAT	transcript	2417598	2418425	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000128;gene_id=HG01258_ch_G0000035;Parent=HG01258_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG01258_ch_T0000128;Name=SRY
HG01258_chrY	CAT	exon	2417598	2418425	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000128;gene_id=HG01258_ch_G0000035;Parent=HG01258_ch_T0000128;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG01258_ch_T0000128:0;Name=SRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2417732	2418346	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000128;gene_id=HG01258_ch_G0000035;Parent=HG01258_ch_T0000128;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG01258_ch_T0000128:0;Name=SRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2417732	2417734	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000128;gene_id=HG01258_ch_G0000035;Parent=HG01258_ch_T0000128;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG01258_ch_T0000128;Name=SRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2418344	2418346	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000128;gene_id=HG01258_ch_G0000035;Parent=HG01258_ch_T0000128;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG01258_ch_T0000128;Name=SRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2472334	2498002	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG01258_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000036;Name=RPS4Y1
HG01258_chrY	CAT	transcript	2472334	2498002	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG01258_ch_T0000129;Name=RPS4Y1
HG01258_chrY	CAT	exon	2472334	2472359	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2472357	2472359	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2472357	2472359	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG01258_ch_T0000129;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2472360	2472896	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2472897	2472974	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2472897	2472974	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2472975	2474808	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2474809	2474989	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2474809	2474989	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2474990	2476377	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2476378	2476475	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2476378	2476475	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2476476	2485333	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2485334	2485505	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2485334	2485505	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2485506	2495821	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2495822	2495979	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2495822	2495979	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2495980	2497526	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000129:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2497527	2498002	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000129:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2497527	2497628	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000129:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2497626	2497628	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000129;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000129;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG01258_ch_T0000129;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2472334	2498002	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG01258_ch_T0000130;Name=RPS4Y1
HG01258_chrY	CAT	exon	2472334	2472705	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2472676	2472705	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2472676	2472678	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG01258_ch_T0000130;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2472706	2472896	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2472897	2472974	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2472897	2472974	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2472975	2474808	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2474809	2474989	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2474809	2474989	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2474990	2476377	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2476378	2476475	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2476378	2476475	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2476476	2485333	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2485334	2485505	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2485334	2485505	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2485506	2495821	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2495822	2495979	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2495822	2495979	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2495980	2497526	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG01258_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2497527	2498002	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG01258_ch_T0000130:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2497527	2497628	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG01258_ch_T0000130:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2497626	2497628	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000130;gene_id=HG01258_ch_G0000036;Parent=HG01258_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG01258_ch_T0000130;Name=RPS4Y1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2566465	2613571	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG01258_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000037;Name=ZFY
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000131;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566853	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566854	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000131:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592157	2592712	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000131:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2592157	2592159	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000131;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000131:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000131:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000131:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000131:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000131:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000131:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000131:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000131:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000131:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000131;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000131;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000131;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000132;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000132;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000132:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000132:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000132:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000132;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000132;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000133;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000133;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000133:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000133:7;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000133:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000133;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000133;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000134;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566853	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566854	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592157	2592712	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2592157	2592159	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000134;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000134:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000134;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000134;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000135;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592157	2592712	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2592157	2592159	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000135;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000135:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000135;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000135;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000136;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566719	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566720	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592157	2592712	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2592157	2592159	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000136;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000136:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000136;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000136;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000137;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566853	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566854	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000137;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000137:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000137;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000137;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000138;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000138;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000138:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000138;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000138;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000139;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592157	2592712	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2592157	2592159	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000139:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000139;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000140;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566530	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566531	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000140:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000140;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000141;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566853	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566854	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606226	2606310	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2606226	2606228	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000141;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000142;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566853	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566854	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000142:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000142:7;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000142:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000142;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2566465	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000143;Name=ZFY
HG01258_chrY	CAT	exon	2566465	2566719	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2566720	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000143:7;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000143;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	2577249	2613571	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG01258_ch_T0000144;Name=ZFY
HG01258_chrY	CAT	exon	2577249	2577346	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2577347	2584975	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2584976	2585064	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2585004	2585064	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	2585004	2585006	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG01258_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2585065	2592139	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2592140	2592712	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2592140	2592712	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2592713	2606160	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606161	2606310	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606161	2606310	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606311	2606576	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2606577	2606720	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2606577	2606720	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2606721	2607735	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2607736	2607888	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2607736	2607888	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2607889	2609004	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609005	2609145	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609005	2609145	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2609146	2609874	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG01258_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2609875	2613571	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG01258_ch_T0000144:7;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	2609875	2611058	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG01258_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	2611056	2611058	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000144;gene_id=HG01258_ch_G0000037;Parent=HG01258_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG01258_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2597885	2633691	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG01258_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG01258_ch_G0000038;Name=ZFY-AS1
HG01258_chrY	CAT	transcript	2597885	2633691	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG01258_ch_T0000145;Name=ZFY-AS1
HG01258_chrY	CAT	exon	2597885	2598005	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_T0000145;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01258_ch_T0000145:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2598006	2612902	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_T0000145;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG01258_ch_T0000145:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2612903	2612992	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_T0000145;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01258_ch_T0000145:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2612993	2633377	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_T0000145;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG01258_ch_T0000145:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2633378	2633691	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG01258_ch_T0000145;gene_id=HG01258_ch_G0000038;Parent=HG01258_ch_T0000145;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG01258_ch_T0000145:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	2634061	2733313	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG01258_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG01258_ch_G0000039;Name=LINC00278
HG01258_chrY	CAT	transcript	2634061	2733313	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG01258_ch_T0000146;Name=LINC00278
HG01258_chrY	CAT	exon	2634061	2634282	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01258_ch_T0000146:0;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2634283	2710324	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01258_ch_T0000146:0;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2710325	2710382	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01258_ch_T0000146:1;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2710383	2728035	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01258_ch_T0000146:1;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2728036	2728097	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01258_ch_T0000146:2;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	2728098	2733125	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG01258_ch_T0000146:2;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	2733126	2733313	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG01258_ch_T0000146;gene_id=HG01258_ch_G0000039;Parent=HG01258_ch_T0000146;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG01258_ch_T0000146:3;Name=LINC00278;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	3210183	3211157	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG01258_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000040;Name=TGIF2LY
HG01258_chrY	CAT	transcript	3210183	3211157	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG01258_ch_T0000147;Name=TGIF2LY
HG01258_chrY	CAT	exon	3210183	3210243	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG01258_ch_T0000147:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3210244	3210339	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG01258_ch_T0000147:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3210340	3211157	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG01258_ch_T0000147:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	3210361	3210918	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG01258_ch_T0000147:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	3210361	3210363	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG01258_ch_T0000147;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	3210916	3210918	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000147;gene_id=HG01258_ch_G0000040;Parent=HG01258_ch_T0000147;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG01258_ch_T0000147;Name=TGIF2LY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	3431785	3466695	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG01258_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG01258_ch_G0000041;Name=LOC105377227
HG01258_chrY	CAT	transcript	3431785	3442800	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01258_ch_T0000148;Name=LOC105377227
HG01258_chrY	CAT	exon	3431785	3435086	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000148;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000148:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435087	3435518	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000148;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000148:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3435519	3435630	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000148;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000148:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435631	3440702	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000148;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000148:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3440703	3442800	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG01258_ch_T0000148;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000148;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000148:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	3431785	3464173	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01258_ch_T0000149;Name=LOC105377227
HG01258_chrY	CAT	exon	3431785	3435086	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000149:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435087	3435518	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000149:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3435519	3435630	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000149:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435631	3440702	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000149:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3440703	3440877	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000149:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3440878	3463543	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000149:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3463544	3464173	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG01258_ch_T0000149;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000149:3;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	3431785	3466695	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG01258_ch_T0000150;Name=LOC105377227
HG01258_chrY	CAT	exon	3431785	3435086	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000150:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435087	3435518	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000150:0;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3435519	3435630	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000150:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	3435631	3466600	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG01258_ch_T0000150:1;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	3466601	3466695	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG01258_ch_T0000150;gene_id=HG01258_ch_G0000041;Parent=HG01258_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG01258_ch_T0000150:2;Name=LOC105377227;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	4239551	4239589	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG01258_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG01258_ch_G0000042;Name=MIR9985
HG01258_chrY	CAT	transcript	4239551	4239661	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG01258_ch_T0000151;gene_id=HG01258_ch_G0000042;Parent=HG01258_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG01258_ch_T0000151;Name=MIR9985
HG01258_chrY	CAT	exon	4239551	4239661	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG01258_ch_T0000151;gene_id=HG01258_ch_G0000042;Parent=HG01258_ch_T0000151;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG01258_ch_T0000151:0;Name=MIR9985;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4239571	4239589	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG01258_ch_T0000152;gene_id=HG01258_ch_G0000042;Parent=HG01258_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG01258_ch_T0000152;Name=MIR9985
HG01258_chrY	CAT	exon	4239571	4239589	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG01258_ch_T0000152;gene_id=HG01258_ch_G0000042;Parent=HG01258_ch_T0000152;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG01258_ch_T0000152:0;Name=MIR9985;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	4633729	5376155	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG01258_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000043;Name=PCDH11Y
HG01258_chrY	CAT	transcript	4633729	4739043	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000153;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4664341	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4664342	4664510	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4664511	4665348	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4665349	4665454	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4665455	4666112	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4666113	4666171	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4666140	4666171	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000153:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4666140	4666142	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000153;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4666172	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690332	4690902	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000153:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000153:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	4737788	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000153:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4737789	4739043	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000153:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4737789	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000153:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	4737804	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000153;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000153;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000153;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4633729	4739043	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000154;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4665348	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4665349	4665454	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4665455	4666112	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4666113	4666171	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4666140	4666171	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4666140	4666142	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000154;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4666172	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690332	4690902	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	4737788	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000154:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4737789	4739043	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000154:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4737789	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	4737804	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000154;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000154;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4633729	5376151	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000155;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690543	4690902	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4690543	4690545	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000155;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	5134517	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5134518	5134716	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5134518	5134716	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5134717	5215679	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5215680	5215703	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5215680	5215703	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5215704	5371198	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000155:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5371199	5376151	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000155:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5371199	5371869	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000155:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	5371867	5371869	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000155;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000155;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4633729	5376155	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000156;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4636120	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4636121	4640168	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4640169	4664341	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4664342	4664510	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4664511	4664657	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4664658	4664789	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4664790	4665348	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4665349	4665454	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4665455	4666112	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4666113	4666171	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4666140	4666171	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4666140	4666142	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000156;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4666172	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690332	4690902	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	5134517	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5134518	5134716	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5134518	5134716	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5134717	5215679	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5215680	5215703	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5215680	5215703	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5215704	5371198	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000156:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5371199	5376155	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000156:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5371199	5371869	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000156:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	5371867	5371869	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000156;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000156;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4633729	5376155	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000157;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4664341	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4664342	4664510	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4664511	4664657	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4664658	4664789	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4664790	4665348	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4665349	4665454	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4665455	4666112	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4666113	4666171	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4666140	4666171	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4666140	4666142	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000157;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4666172	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690332	4690902	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	5134517	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5134518	5134716	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5134518	5134716	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5134717	5215679	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5215680	5215703	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5215680	5215703	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5215704	5371198	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000157:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5371199	5376155	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000157:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5371199	5371869	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	5371867	5371869	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000157;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000157;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4633729	5376155	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000158;Name=PCDH11Y
HG01258_chrY	CAT	exon	4633729	4634038	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4634039	4636120	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4636121	4636191	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4636192	4665348	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4665349	4665454	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4665455	4666112	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4666113	4666171	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4666140	4666171	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4666140	4666142	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000158;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4666172	4690331	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4690332	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690332	4690902	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	5134517	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5134518	5134716	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5134518	5134716	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5134717	5215679	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5215680	5215703	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5215680	5215703	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5215704	5371198	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000158:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5371199	5376155	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000158:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5371199	5371869	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	5371867	5371869	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000158;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000158;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4689531	4739043	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000159;Name=PCDH11Y
HG01258_chrY	CAT	exon	4689531	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690267	4690902	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4690267	4690269	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000159;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	4737788	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4737789	4739043	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000159:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4737789	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000159:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	4737804	4737806	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000159;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000159;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	4689533	5376155	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG01258_ch_T0000160;Name=PCDH11Y
HG01258_chrY	CAT	exon	4689533	4690902	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4690267	4690902	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	4690267	4690269	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG01258_ch_T0000160;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4690903	4731659	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	4731660	4734152	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	4731660	4734152	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	4734153	5134517	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5134518	5134716	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000160:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5134518	5134716	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000160:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5134717	5215679	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000160:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5215680	5215703	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000160:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5215680	5215703	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000160:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5215704	5371198	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG01258_ch_T0000160:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5371199	5376155	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG01258_ch_T0000160:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	5371199	5371869	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG01258_ch_T0000160:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	5371867	5371869	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000160;gene_id=HG01258_ch_G0000043;Parent=HG01258_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG01258_ch_T0000160;Name=PCDH11Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	5876371	5877535	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=HG01258_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG01258_ch_G0000044;Name=TTTY23
HG01258_chrY	CAT	transcript	5876371	5877535	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_G0000044;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG01258_ch_T0000161;Name=TTTY23
HG01258_chrY	CAT	exon	5876371	5876679	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_T0000161;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01258_ch_T0000161:0;Name=TTTY23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5876680	5877219	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_T0000161;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG01258_ch_T0000161:0;Name=TTTY23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5877220	5877365	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_T0000161;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01258_ch_T0000161:1;Name=TTTY23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5877366	5877478	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_T0000161;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG01258_ch_T0000161:1;Name=TTTY23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5877479	5877535	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG01258_ch_T0000161;gene_id=HG01258_ch_G0000044;Parent=HG01258_ch_T0000161;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG01258_ch_T0000161:2;Name=TTTY23;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	5969215	5973425	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG01258_ch_G0000045;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG01258_ch_G0000045;Name=LINC00280
HG01258_chrY	CAT	transcript	5969215	5973425	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_G0000045;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG01258_ch_T0000162;Name=LINC00280
HG01258_chrY	CAT	exon	5969215	5969433	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_T0000162;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000162:0;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5969434	5970695	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_T0000162;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG01258_ch_T0000162:0;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5970696	5970838	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_T0000162;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000162:1;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5970839	5973339	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_T0000162;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG01258_ch_T0000162:1;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5973340	5973425	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG01258_ch_T0000162;gene_id=HG01258_ch_G0000045;Parent=HG01258_ch_T0000162;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000162:2;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	5973495	5985593	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=HG01258_ch_G0000046;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG01258_ch_G0000046;Name=TTTY22
HG01258_chrY	CAT	transcript	5973495	5985593	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_G0000046;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG01258_ch_T0000163;Name=TTTY22
HG01258_chrY	CAT	exon	5973495	5973540	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01258_ch_T0000163:0;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5973541	5976630	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01258_ch_T0000163:0;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5976631	5976669	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01258_ch_T0000163:1;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5976670	5977354	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01258_ch_T0000163:1;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5977355	5977429	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01258_ch_T0000163:2;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5977430	5981854	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01258_ch_T0000163:2;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5981855	5981966	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01258_ch_T0000163:3;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5981967	5985438	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG01258_ch_T0000163:3;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5985439	5985593	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG01258_ch_T0000163;gene_id=HG01258_ch_G0000046;Parent=HG01258_ch_T0000163;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG01258_ch_T0000163:4;Name=TTTY22;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	5988649	5991956	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;gene_id=HG01258_ch_G0000047;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG01258_ch_G0000047;Name=LOC107987342
HG01258_chrY	CAT	transcript	5988649	5991956	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_G0000047;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG01258_ch_T0000164;Name=LOC107987342
HG01258_chrY	CAT	exon	5988649	5988797	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_T0000164;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01258_ch_T0000164:0;Name=LOC107987342;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5988798	5991328	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_T0000164;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG01258_ch_T0000164:0;Name=LOC107987342;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5991329	5991401	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_T0000164;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01258_ch_T0000164:1;Name=LOC107987342;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	5991402	5991777	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_T0000164;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG01258_ch_T0000164:1;Name=LOC107987342;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	5991778	5991956	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG01258_ch_T0000164;gene_id=HG01258_ch_G0000047;Parent=HG01258_ch_T0000164;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG01258_ch_T0000164:2;Name=LOC107987342;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6012427	6033590	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=HG01258_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG01258_ch_G0000048;Name=TTTY1
HG01258_chrY	CAT	transcript	6012427	6033590	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_G0000048;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG01258_ch_T0000165;Name=TTTY1
HG01258_chrY	CAT	exon	6012427	6012701	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01258_ch_T0000165:0;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6012702	6016125	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01258_ch_T0000165:0;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6016126	6016285	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01258_ch_T0000165:1;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6016286	6023148	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01258_ch_T0000165:1;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6023149	6023257	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01258_ch_T0000165:2;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6023258	6025613	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01258_ch_T0000165:2;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6025614	6025751	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01258_ch_T0000165:3;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6025752	6033332	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG01258_ch_T0000165:3;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6033333	6033590	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG01258_ch_T0000165;gene_id=HG01258_ch_G0000048;Parent=HG01258_ch_T0000165;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG01258_ch_T0000165:4;Name=TTTY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6028270	6050471	.	-	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=HG01258_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG01258_ch_G0000049;Name=TTTY2B
HG01258_chrY	CAT	transcript	6028270	6050471	1000	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_G0000049;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG01258_ch_T0000166;Name=TTTY2B
HG01258_chrY	CAT	exon	6028270	6028949	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:0;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6028950	6030172	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:0;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6030173	6030370	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:1;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6030371	6030490	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:1;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6030491	6030569	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:2;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6030570	6033399	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:2;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6033400	6033556	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:3;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6033557	6034248	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:3;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6034249	6034397	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:4;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6034398	6041791	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:4;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6041792	6041878	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:5;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6041879	6044354	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:5;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6044355	6044432	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:6;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6044433	6050266	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG01258_ch_T0000166:6;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6050267	6050471	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG01258_ch_T0000166;gene_id=HG01258_ch_G0000049;Parent=HG01258_ch_T0000166;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG01258_ch_T0000166:7;Name=TTTY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6065461	6069104	.	+	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=HG01258_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG01258_ch_G0000050;Name=TTTY21
HG01258_chrY	CAT	transcript	6065461	6069104	1000	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01258_ch_T0000167;gene_id=HG01258_ch_G0000050;Parent=HG01258_ch_G0000050;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG01258_ch_T0000167;Name=TTTY21
HG01258_chrY	CAT	exon	6065461	6065662	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01258_ch_T0000167;gene_id=HG01258_ch_G0000050;Parent=HG01258_ch_T0000167;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG01258_ch_T0000167:0;Name=TTTY21;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6065663	6068999	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01258_ch_T0000167;gene_id=HG01258_ch_G0000050;Parent=HG01258_ch_T0000167;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG01258_ch_T0000167:0;Name=TTTY21;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6069000	6069104	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG01258_ch_T0000167;gene_id=HG01258_ch_G0000050;Parent=HG01258_ch_T0000167;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG01258_ch_T0000167:1;Name=TTTY21;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6071495	6079933	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=HG01258_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG01258_ch_G0000051;Name=TTTY7
HG01258_chrY	CAT	transcript	6071495	6079933	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_G0000051;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG01258_ch_T0000168;Name=TTTY7
HG01258_chrY	CAT	exon	6071495	6071531	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:0;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6071532	6072472	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:0;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6072473	6072634	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:1;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6072635	6074941	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:1;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6074942	6075016	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:2;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6075017	6075704	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:2;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6075705	6076181	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:3;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6076182	6078098	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:3;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6078099	6078212	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:4;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6078213	6079185	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:4;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6079186	6079441	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:5;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6079442	6079687	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG01258_ch_T0000168:5;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6079688	6079933	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG01258_ch_T0000168;gene_id=HG01258_ch_G0000051;Parent=HG01258_ch_T0000168;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG01258_ch_T0000168:6;Name=TTTY7;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6093054	6095653	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG01258_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG01258_ch_G0000052;Name=TTTY8B
HG01258_chrY	CAT	transcript	6093054	6095653	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_G0000052;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG01258_ch_T0000169;Name=TTTY8B
HG01258_chrY	CAT	exon	6093054	6093243	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_T0000169;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01258_ch_T0000169:0;Name=TTTY8B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6093244	6094835	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_T0000169;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG01258_ch_T0000169:0;Name=TTTY8B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6094836	6095040	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_T0000169;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01258_ch_T0000169:1;Name=TTTY8B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6095041	6095517	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_T0000169;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG01258_ch_T0000169:1;Name=TTTY8B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6095518	6095653	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG01258_ch_T0000169;gene_id=HG01258_ch_G0000052;Parent=HG01258_ch_T0000169;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG01258_ch_T0000169:2;Name=TTTY8B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6472173	6518011	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=HG01258_ch_G0000053;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000053;Name=AMELY
HG01258_chrY	CAT	transcript	6472173	6480284	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG01258_ch_T0000170;Name=AMELY
HG01258_chrY	CAT	exon	6472173	6472333	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6472328	6472333	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6472328	6472330	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG01258_ch_T0000170;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6472334	6474292	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6474293	6474718	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6474293	6474718	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6474719	6474987	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6474988	6475032	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6474988	6475032	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6475033	6475123	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6475124	6475165	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6475124	6475165	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6475166	6476262	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6476263	6476310	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6476263	6476310	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6476311	6478811	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6478812	6478877	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:5;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6478812	6478865	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000170:5;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6478863	6478865	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG01258_ch_T0000170;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6478878	6480228	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000170:5;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6480229	6480284	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000170;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000170;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000170:6;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6472173	6518011	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG01258_ch_T0000171;Name=AMELY
HG01258_chrY	CAT	exon	6472173	6472333	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6472328	6472333	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000171:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6472328	6472330	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG01258_ch_T0000171;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6472334	6474292	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:0;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6474293	6474718	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6474293	6474718	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000171:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6474719	6474987	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:1;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6474988	6475032	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6474988	6475032	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000171:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6475033	6476262	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:2;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6476263	6476310	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6476263	6476310	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000171:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6476311	6478811	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:3;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6478812	6478877	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6478812	6478865	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG01258_ch_T0000171:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6478863	6478865	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG01258_ch_T0000171;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6478878	6480228	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:4;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6480229	6480328	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:5;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6480329	6517931	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG01258_ch_T0000171:5;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6517932	6518011	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000171;gene_id=HG01258_ch_G0000053;Parent=HG01258_ch_T0000171;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG01258_ch_T0000171:6;Name=AMELY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6516124	6711950	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG01258_ch_G0000054;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000054;Name=TBL1Y
HG01258_chrY	CAT	transcript	6516124	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000172;Name=TBL1Y
HG01258_chrY	CAT	exon	6516124	6516362	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6516363	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6602066	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6602067	6602161	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6602162	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000172;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6707046	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000172:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6707047	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000172:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6707047	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000172:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6707230	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000172;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000172;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000172;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000173;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6602066	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6602067	6602161	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6602162	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000173;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6707046	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000173:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6707047	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000173:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6707047	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000173:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6707230	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000173;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000173;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000173;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000174;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000174;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6707046	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000174:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6707047	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000174:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6707047	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000174:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6707230	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000174;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000174;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000174;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6697945	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000175;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6602066	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6602067	6602161	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6602162	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000175;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6697733	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000175:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6697734	6697945	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000175:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6697734	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000175:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6697752	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000175;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000175;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000175;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6697945	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000176;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6602066	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6602067	6602161	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6602162	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000176;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6697733	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000176:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6697734	6697945	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000176:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6697734	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000176:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6697752	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000176;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000176;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000176;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6697945	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000177;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000177;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6697733	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000177:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6697734	6697945	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000177:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6697734	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000177:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6697752	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000177;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000177;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000177;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6697945	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000178;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000178;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6697733	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000178:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6697734	6697945	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000178:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6697734	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000178:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6697752	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000178;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000178;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000178;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000179;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000179;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6707046	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000179:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6707047	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000179:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6707047	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000179:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6707230	6707232	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000179;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000179;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000179;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000180;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000180;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6707046	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:16;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6707047	6707112	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6707047	6707112	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6707113	6711659	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000180:17;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6711660	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000180:18;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6711660	6711668	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000180:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6711666	6711668	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000180;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000180;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000180;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000181;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6518346	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6518347	6518431	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6518432	6584470	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6584471	6584501	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6584502	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000181;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693548	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000181:14;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693549	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000181:15;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693549	6693654	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000181:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6693652	6693654	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000181;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000181;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000181;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6516956	6711950	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000182;Name=TBL1Y
HG01258_chrY	CAT	exon	6516956	6517241	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6517242	6627710	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6627711	6627799	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6627800	6631295	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6631296	6631403	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6631346	6631403	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6631346	6631348	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000182;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6631404	6649239	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6649240	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649240	6649385	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693548	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000182:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693549	6711950	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000182:13;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693549	6693654	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000182:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6693652	6693654	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000182;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000182;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000182;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	6648871	6697945	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG01258_ch_T0000183;Name=TBL1Y
HG01258_chrY	CAT	exon	6648871	6649385	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6649140	6649385	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	6649140	6649142	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG01258_ch_T0000183;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6649386	6670158	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6670159	6670411	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6670159	6670411	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6670412	6676457	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676458	6676590	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676458	6676590	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6676591	6676981	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6676982	6677123	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6676982	6677123	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677124	6677821	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677822	6677885	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677822	6677885	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6677886	6677994	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6677995	6678092	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6677995	6678092	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6678093	6680821	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6680822	6680882	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6680822	6680882	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6680883	6686993	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6686994	6687115	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6686994	6687115	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6687116	6692159	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692160	6692234	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692160	6692234	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692235	6692551	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6692552	6692679	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6692552	6692679	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6692680	6693528	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6693529	6693694	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6693529	6693694	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6693695	6696350	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6696351	6696452	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6696351	6696452	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6696453	6697733	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG01258_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6697734	6697945	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG01258_ch_T0000183:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	6697734	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG01258_ch_T0000183:12;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	6697752	6697754	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000183;gene_id=HG01258_ch_G0000054;Parent=HG01258_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG01258_ch_T0000183;Name=TBL1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	6880227	6987797	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG01258_ch_G0000055;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG01258_ch_G0000055;Name=PRKY
HG01258_chrY	CAT	transcript	6880227	6987797	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_G0000055;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG01258_ch_T0000184;Name=PRKY
HG01258_chrY	CAT	exon	6880227	6880733	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:0;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6880734	6910188	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:0;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6910189	6910357	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:1;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6910358	6932158	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:1;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6932159	6932422	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:2;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6932423	6947367	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:2;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6947368	6947487	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:3;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6947488	6962384	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:3;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6962385	6962480	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:4;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6962481	6973605	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:4;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6973606	6973683	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:5;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6973684	6977992	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:5;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6977993	6978139	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:6;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	6978140	6981961	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG01258_ch_T0000184:6;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	6981962	6987797	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG01258_ch_T0000184;gene_id=HG01258_ch_G0000055;Parent=HG01258_ch_T0000184;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG01258_ch_T0000184:7;Name=PRKY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	7064852	7126865	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG01258_ch_G0000056;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG01258_ch_G0000056;Name=LOC107987338
HG01258_chrY	CAT	transcript	7064852	7126865	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_G0000056;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG01258_ch_T0000185;Name=LOC107987338
HG01258_chrY	CAT	exon	7064852	7064965	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01258_ch_T0000185:0;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7064966	7107256	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01258_ch_T0000185:0;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7107257	7107415	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01258_ch_T0000185:1;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7107416	7125207	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01258_ch_T0000185:1;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7125208	7125316	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01258_ch_T0000185:2;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7125317	7126349	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG01258_ch_T0000185:2;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7126350	7126865	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG01258_ch_T0000185;gene_id=HG01258_ch_G0000056;Parent=HG01258_ch_T0000185;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG01258_ch_T0000185:3;Name=LOC107987338;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	7305765	7307656	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG01258_ch_G0000057;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG01258_ch_G0000057;Name=TTTY16
HG01258_chrY	CAT	transcript	7305765	7307656	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01258_ch_T0000186;gene_id=HG01258_ch_G0000057;Parent=HG01258_ch_G0000057;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG01258_ch_T0000186;Name=TTTY16
HG01258_chrY	CAT	exon	7305765	7305895	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01258_ch_T0000186;gene_id=HG01258_ch_G0000057;Parent=HG01258_ch_T0000186;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG01258_ch_T0000186:0;Name=TTTY16;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7305896	7307595	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01258_ch_T0000186;gene_id=HG01258_ch_G0000057;Parent=HG01258_ch_T0000186;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG01258_ch_T0000186:0;Name=TTTY16;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7307596	7307656	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG01258_ch_T0000186;gene_id=HG01258_ch_G0000057;Parent=HG01258_ch_T0000186;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG01258_ch_T0000186:1;Name=TTTY16;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	7389183	7419586	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG01258_ch_G0000058;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG01258_ch_G0000058;Name=LOC107987339
HG01258_chrY	CAT	transcript	7389183	7419586	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_G0000058;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG01258_ch_T0000187;Name=LOC107987339
HG01258_chrY	CAT	exon	7389183	7389230	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_T0000187;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01258_ch_T0000187:0;Name=LOC107987339;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7389231	7415210	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_T0000187;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG01258_ch_T0000187:0;Name=LOC107987339;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7415211	7415320	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_T0000187;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01258_ch_T0000187:1;Name=LOC107987339;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7415321	7418869	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_T0000187;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG01258_ch_T0000187:1;Name=LOC107987339;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7418870	7419586	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG01258_ch_T0000187;gene_id=HG01258_ch_G0000058;Parent=HG01258_ch_T0000187;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG01258_ch_T0000187:2;Name=LOC107987339;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	7413731	7420399	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG01258_ch_G0000059;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG01258_ch_G0000059;Name=TTTY12
HG01258_chrY	CAT	transcript	7413731	7420399	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG01258_ch_T0000188;Name=TTTY12
HG01258_chrY	CAT	exon	7413731	7413778	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000188;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000188:0;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7413779	7414639	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000188;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01258_ch_T0000188:0;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7414640	7414795	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000188;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000188:1;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7414796	7419576	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000188;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01258_ch_T0000188:1;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7419577	7420399	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG01258_ch_T0000188;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000188;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000188:2;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	7413731	7420399	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG01258_ch_T0000189;Name=TTTY12
HG01258_chrY	CAT	exon	7413731	7413778	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000189:0;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7413779	7414639	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01258_ch_T0000189:0;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7414640	7414795	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000189:1;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7414796	7415259	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01258_ch_T0000189:1;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7415260	7415341	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000189:2;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7415342	7419576	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG01258_ch_T0000189:2;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7419577	7420399	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG01258_ch_T0000189;gene_id=HG01258_ch_G0000059;Parent=HG01258_ch_T0000189;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG01258_ch_T0000189:3;Name=TTTY12;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	7440531	7468496	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG01258_ch_G0000060;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG01258_ch_G0000060;Name=LOC105377229
HG01258_chrY	CAT	transcript	7440531	7468496	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_G0000060;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG01258_ch_T0000190;Name=LOC105377229
HG01258_chrY	CAT	exon	7440531	7441806	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01258_ch_T0000190:0;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7441807	7441953	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01258_ch_T0000190:0;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7441954	7442125	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01258_ch_T0000190:1;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7442126	7442693	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01258_ch_T0000190:1;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7442694	7442818	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01258_ch_T0000190:2;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	7442819	7468427	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG01258_ch_T0000190:2;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	7468428	7468496	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG01258_ch_T0000190;gene_id=HG01258_ch_G0000060;Parent=HG01258_ch_T0000190;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG01258_ch_T0000190:3;Name=LOC105377229;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8004748	8017015	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG01258_ch_G0000061;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG01258_ch_G0000061;Name=LOC105377231
HG01258_chrY	CAT	transcript	8004748	8017015	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG01258_ch_T0000191;Name=LOC105377231
HG01258_chrY	CAT	exon	8004748	8004833	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000191:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8004834	8012427	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000191:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8012428	8012681	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000191:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8012682	8013382	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000191:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8013383	8013535	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000191:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8013536	8016827	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000191:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8016828	8017015	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG01258_ch_T0000191;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000191;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000191:3;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8004748	8017015	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG01258_ch_T0000192;Name=LOC105377231
HG01258_chrY	CAT	exon	8004748	8004833	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000192:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8004834	8012427	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000192:0;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8012428	8012671	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000192:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8012672	8013382	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000192:1;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8013383	8013535	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000192:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8013536	8016827	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG01258_ch_T0000192:2;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8016828	8017015	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG01258_ch_T0000192;gene_id=HG01258_ch_G0000061;Parent=HG01258_ch_T0000192;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG01258_ch_T0000192:3;Name=LOC105377231;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8158754	8160964	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG01258_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG01258_ch_G0000062;Name=LOC105377232
HG01258_chrY	CAT	transcript	8158754	8160964	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_G0000062;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG01258_ch_T0000193;Name=LOC105377232
HG01258_chrY	CAT	exon	8158754	8158768	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_T0000193;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01258_ch_T0000193:0;Name=LOC105377232;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8158769	8159453	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_T0000193;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG01258_ch_T0000193:0;Name=LOC105377232;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8159454	8159528	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_T0000193;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01258_ch_T0000193:1;Name=LOC105377232;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8159529	8160950	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_T0000193;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG01258_ch_T0000193:1;Name=LOC105377232;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8160951	8160964	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG01258_ch_T0000193;gene_id=HG01258_ch_G0000062;Parent=HG01258_ch_T0000193;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG01258_ch_T0000193:2;Name=LOC105377232;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8170440	8171926	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG01258_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG01258_ch_G0000063;Name=LOC107987354
HG01258_chrY	CAT	transcript	8170440	8171926	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_G0000063;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG01258_ch_T0000194;Name=LOC107987354
HG01258_chrY	CAT	exon	8170440	8170598	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_T0000194;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01258_ch_T0000194:0;Name=LOC107987354;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8170599	8170749	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_T0000194;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG01258_ch_T0000194:0;Name=LOC107987354;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8170750	8170824	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_T0000194;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01258_ch_T0000194:1;Name=LOC107987354;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8170825	8171788	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_T0000194;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG01258_ch_T0000194:1;Name=LOC107987354;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8171789	8171926	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG01258_ch_T0000194;gene_id=HG01258_ch_G0000063;Parent=HG01258_ch_T0000194;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG01258_ch_T0000194:2;Name=LOC107987354;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8248074	8254909	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG01258_ch_G0000064;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG01258_ch_G0000064;Name=LINC00279
HG01258_chrY	CAT	transcript	8248074	8254909	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_G0000064;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG01258_ch_T0000195;Name=LINC00279
HG01258_chrY	CAT	exon	8248074	8248186	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01258_ch_T0000195:0;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8248187	8253911	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01258_ch_T0000195:0;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8253912	8254107	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01258_ch_T0000195:1;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8254108	8254458	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01258_ch_T0000195:1;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8254459	8254701	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01258_ch_T0000195:2;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8254702	8254833	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG01258_ch_T0000195:2;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8254834	8254909	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG01258_ch_T0000195;gene_id=HG01258_ch_G0000064;Parent=HG01258_ch_T0000195;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG01258_ch_T0000195:3;Name=LINC00279;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8269822	8270663	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG01258_ch_G0000065;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG01258_ch_G0000065;Name=LOC107987340
HG01258_chrY	CAT	transcript	8269822	8270663	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01258_ch_T0000196;gene_id=HG01258_ch_G0000065;Parent=HG01258_ch_G0000065;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG01258_ch_T0000196;Name=LOC107987340
HG01258_chrY	CAT	exon	8269822	8269943	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01258_ch_T0000196;gene_id=HG01258_ch_G0000065;Parent=HG01258_ch_T0000196;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG01258_ch_T0000196:0;Name=LOC107987340;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8269944	8270278	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01258_ch_T0000196;gene_id=HG01258_ch_G0000065;Parent=HG01258_ch_T0000196;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG01258_ch_T0000196:0;Name=LOC107987340;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8270279	8270663	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG01258_ch_T0000196;gene_id=HG01258_ch_G0000065;Parent=HG01258_ch_T0000196;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG01258_ch_T0000196:1;Name=LOC107987340;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8293150	8293658	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG01258_ch_G0000066;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG01258_ch_G0000066;Name=TTTY18
HG01258_chrY	CAT	transcript	8293150	8293658	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01258_ch_T0000197;gene_id=HG01258_ch_G0000066;Parent=HG01258_ch_G0000066;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG01258_ch_T0000197;Name=TTTY18
HG01258_chrY	CAT	exon	8293150	8293212	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01258_ch_T0000197;gene_id=HG01258_ch_G0000066;Parent=HG01258_ch_T0000197;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG01258_ch_T0000197:0;Name=TTTY18;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8293213	8293500	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01258_ch_T0000197;gene_id=HG01258_ch_G0000066;Parent=HG01258_ch_T0000197;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG01258_ch_T0000197:0;Name=TTTY18;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8293501	8293658	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG01258_ch_T0000197;gene_id=HG01258_ch_G0000066;Parent=HG01258_ch_T0000197;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG01258_ch_T0000197:1;Name=TTTY18;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8303677	8305097	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG01258_ch_G0000067;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG01258_ch_G0000067;Name=LOC105377234
HG01258_chrY	CAT	transcript	8303677	8305097	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_G0000067;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG01258_ch_T0000198;Name=LOC105377234
HG01258_chrY	CAT	exon	8303677	8303763	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_T0000198;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01258_ch_T0000198:0;Name=LOC105377234;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8303764	8304247	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_T0000198;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG01258_ch_T0000198:0;Name=LOC105377234;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8304248	8304325	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_T0000198;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01258_ch_T0000198:1;Name=LOC105377234;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8304326	8304905	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_T0000198;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG01258_ch_T0000198:1;Name=LOC105377234;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8304906	8305097	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG01258_ch_T0000198;gene_id=HG01258_ch_G0000067;Parent=HG01258_ch_T0000198;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG01258_ch_T0000198:2;Name=LOC105377234;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8314272	8315083	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG01258_ch_G0000068;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG01258_ch_G0000068;Name=TTTY19
HG01258_chrY	CAT	transcript	8314272	8315083	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01258_ch_T0000199;gene_id=HG01258_ch_G0000068;Parent=HG01258_ch_G0000068;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG01258_ch_T0000199;Name=TTTY19
HG01258_chrY	CAT	exon	8314272	8314359	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01258_ch_T0000199;gene_id=HG01258_ch_G0000068;Parent=HG01258_ch_T0000199;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG01258_ch_T0000199:0;Name=TTTY19;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8314360	8314902	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01258_ch_T0000199;gene_id=HG01258_ch_G0000068;Parent=HG01258_ch_T0000199;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG01258_ch_T0000199:0;Name=TTTY19;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8314903	8315083	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG01258_ch_T0000199;gene_id=HG01258_ch_G0000068;Parent=HG01258_ch_T0000199;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG01258_ch_T0000199:1;Name=TTTY19;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8331610	8334095	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG01258_ch_G0000069;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG01258_ch_G0000069;Name=LOC105377235
HG01258_chrY	CAT	transcript	8331610	8334095	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_G0000069;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG01258_ch_T0000200;Name=LOC105377235
HG01258_chrY	CAT	exon	8331610	8331893	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01258_ch_T0000200:0;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8331894	8331990	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01258_ch_T0000200:0;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8331991	8332086	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01258_ch_T0000200:1;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8332087	8332176	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01258_ch_T0000200:1;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8332177	8332439	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01258_ch_T0000200:2;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8332440	8333907	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG01258_ch_T0000200:2;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8333908	8334095	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG01258_ch_T0000200;gene_id=HG01258_ch_G0000069;Parent=HG01258_ch_T0000200;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG01258_ch_T0000200:3;Name=LOC105377235;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8393133	8427199	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG01258_ch_G0000070;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG01258_ch_G0000070;Name=TTTY11
HG01258_chrY	CAT	transcript	8393133	8427199	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_G0000070;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG01258_ch_T0000201;Name=TTTY11
HG01258_chrY	CAT	exon	8393133	8393226	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01258_ch_T0000201:0;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8393227	8393707	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01258_ch_T0000201:0;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8393708	8394023	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01258_ch_T0000201:1;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8394024	8398819	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01258_ch_T0000201:1;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8398820	8399122	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01258_ch_T0000201:2;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8399123	8404680	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01258_ch_T0000201:2;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8404681	8404764	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01258_ch_T0000201:3;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8404765	8427162	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG01258_ch_T0000201:3;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8427163	8427199	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG01258_ch_T0000201;gene_id=HG01258_ch_G0000070;Parent=HG01258_ch_T0000201;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG01258_ch_T0000201:4;Name=TTTY11;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8824772	8829636	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG01258_ch_G0000071;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG01258_ch_G0000071;Name=LOC105379264
HG01258_chrY	CAT	transcript	8824772	8829636	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_G0000071;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG01258_ch_T0000202;Name=LOC105379264
HG01258_chrY	CAT	exon	8824772	8824846	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01258_ch_T0000202:0;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8824847	8825000	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01258_ch_T0000202:0;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8825001	8825105	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01258_ch_T0000202:1;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8825106	8827167	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01258_ch_T0000202:1;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8827168	8827243	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01258_ch_T0000202:2;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8827244	8829552	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG01258_ch_T0000202:2;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8829553	8829636	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG01258_ch_T0000202;gene_id=HG01258_ch_G0000071;Parent=HG01258_ch_T0000202;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG01258_ch_T0000202:3;Name=LOC105379264;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8834325	8842871	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG01258_ch_G0000072;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG01258_ch_G0000072;Name=LOC105379265
HG01258_chrY	CAT	transcript	8834325	8842871	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_G0000072;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG01258_ch_T0000203;Name=LOC105379265
HG01258_chrY	CAT	exon	8834325	8834880	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01258_ch_T0000203:0;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8834881	8835988	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01258_ch_T0000203:0;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8835989	8836130	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01258_ch_T0000203:1;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8836131	8838274	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01258_ch_T0000203:1;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8838275	8838361	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01258_ch_T0000203:2;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8838362	8842742	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG01258_ch_T0000203:2;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8842743	8842871	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG01258_ch_T0000203;gene_id=HG01258_ch_G0000072;Parent=HG01258_ch_T0000203;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG01258_ch_T0000203:3;Name=LOC105379265;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8848905	8851156	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG01258_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000073;Name=LOC105379266
HG01258_chrY	CAT	transcript	8848905	8851156	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000204;gene_id=HG01258_ch_G0000073;Parent=HG01258_ch_G0000073;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG01258_ch_T0000204;Name=LOC105379266
HG01258_chrY	CAT	exon	8848905	8849189	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000204;gene_id=HG01258_ch_G0000073;Parent=HG01258_ch_T0000204;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG01258_ch_T0000204:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8849190	8849874	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000204;gene_id=HG01258_ch_G0000073;Parent=HG01258_ch_T0000204;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG01258_ch_T0000204:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8849875	8851156	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000204;gene_id=HG01258_ch_G0000073;Parent=HG01258_ch_T0000204;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG01258_ch_T0000204:1;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8852312	8864540	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG01258_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG01258_ch_G0000074;Name=LOC105379267
HG01258_chrY	CAT	transcript	8852312	8864540	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_G0000074;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG01258_ch_T0000205;Name=LOC105379267
HG01258_chrY	CAT	exon	8852312	8852483	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_T0000205;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01258_ch_T0000205:0;Name=LOC105379267;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8852484	8853728	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_T0000205;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG01258_ch_T0000205:0;Name=LOC105379267;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8853729	8853803	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_T0000205;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01258_ch_T0000205:1;Name=LOC105379267;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8853804	8864469	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_T0000205;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG01258_ch_T0000205:1;Name=LOC105379267;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8864470	8864540	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG01258_ch_T0000205;gene_id=HG01258_ch_G0000074;Parent=HG01258_ch_T0000205;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG01258_ch_T0000205:2;Name=LOC105379267;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8876988	8882801	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG01258_ch_G0000075;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG01258_ch_G0000075;Name=RBMY1A3P
HG01258_chrY	CAT	transcript	8876988	8882801	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_G0000075;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG01258_ch_T0000206;Name=RBMY1A3P
HG01258_chrY	CAT	exon	8876988	8877018	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01258_ch_T0000206:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8877019	8878918	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01258_ch_T0000206:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8878919	8879096	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01258_ch_T0000206:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8879097	8882111	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01258_ch_T0000206:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8882112	8882215	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01258_ch_T0000206:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8882216	8882687	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG01258_ch_T0000206:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8882688	8882801	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG01258_ch_T0000206;gene_id=HG01258_ch_G0000075;Parent=HG01258_ch_T0000206;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG01258_ch_T0000206:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8889807	8894759	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1;gene_id=HG01258_ch_G0000076;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG01258_ch_G0000076;Name=TTTY20
HG01258_chrY	CAT	transcript	8889807	8894759	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1;transcript_id=HG01258_ch_T0000207;gene_id=HG01258_ch_G0000076;Parent=HG01258_ch_G0000076;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG01258_ch_T0000207;Name=TTTY20
HG01258_chrY	CAT	exon	8889807	8889983	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1;transcript_id=HG01258_ch_T0000207;gene_id=HG01258_ch_G0000076;Parent=HG01258_ch_T0000207;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG01258_ch_T0000207:0;Name=TTTY20;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8889984	8894677	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1;transcript_id=HG01258_ch_T0000207;gene_id=HG01258_ch_G0000076;Parent=HG01258_ch_T0000207;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG01258_ch_T0000207:0;Name=TTTY20;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8894678	8894759	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1;transcript_id=HG01258_ch_T0000207;gene_id=HG01258_ch_G0000076;Parent=HG01258_ch_T0000207;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG01258_ch_T0000207:1;Name=TTTY20;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8897391	8900187	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG01258_ch_G0000077;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000077;Name=TSPY8
HG01258_chrY	CAT	transcript	8897391	8900187	100	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_G0000077;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01258_ch_T0000208;Name=TSPY8
HG01258_chrY	CAT	exon	8897391	8897922	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8897437	8897922	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8897437	8897439	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000208;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8897923	8898529	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000208:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898530	8898607	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898530	8898607	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898608	8898735	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000208:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898736	8898847	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898736	8898847	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898848	8898948	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000208:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898949	8899094	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898949	8899094	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899095	8899200	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000208:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899201	8899282	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8899201	8899282	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899283	8899976	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000208:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899977	8900187	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000208:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8899977	8899999	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000208:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8899997	8899999	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000208;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000208;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000208;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8897391	8900187	100	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_G0000077;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01258_ch_T0000209;Name=TSPY8
HG01258_chrY	CAT	exon	8897391	8897922	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8897437	8897922	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000209:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8897437	8897439	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000209;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8897923	8898529	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000209:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898530	8898607	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898530	8898607	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000209:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898608	8898735	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000209:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898736	8898847	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898736	8898847	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000209:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898848	8898948	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000209:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898949	8899094	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898949	8899094	.	+	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000209:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899095	8899189	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000209:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899190	8899282	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8899190	8899252	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000209:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8899250	8899252	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000209;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899283	8899976	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000209:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899977	8900187	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000209;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000209;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000209:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8897391	8900187	100	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_G0000077;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG01258_ch_T0000210;Name=TSPY8
HG01258_chrY	CAT	exon	8897391	8897922	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8897437	8897922	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000210:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8897437	8897439	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000210;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8897923	8898529	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000210:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898530	8898607	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898530	8898607	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000210:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898608	8898735	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000210:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898736	8898847	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898736	8898847	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000210:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898848	8898955	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000210:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898956	8899094	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8898956	8899094	.	+	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000210:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899095	8899200	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000210:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899201	8899282	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8899201	8899252	.	+	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000210:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8899250	8899252	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000210;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899283	8899976	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000210:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899977	8900187	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000210;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000210;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000210:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8897391	8900187	1000	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_G0000077;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG01258_ch_T0000211;Name=TSPY8
HG01258_chrY	CAT	exon	8897391	8897922	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8897923	8898529	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000211:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898530	8898607	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898608	8898735	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000211:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898736	8898847	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8898848	8898955	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000211:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8898956	8899094	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899095	8899189	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000211:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899190	8899282	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8899283	8899976	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000211:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8899977	8900187	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000211;gene_id=HG01258_ch_G0000077;Parent=HG01258_ch_T0000211;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000211:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8909456	8915068	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG01258_ch_G0000078;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000078;Name=FAM197Y3
HG01258_chrY	CAT	transcript	8909456	8915068	1000	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_G0000078;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000212;Name=FAM197Y3
HG01258_chrY	CAT	exon	8909456	8909515	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000212:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8909516	8913065	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000212:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8913066	8913224	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000212:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8913225	8914734	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000212:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8914735	8914880	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000212:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8914881	8914966	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000212:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8914967	8915068	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG01258_ch_T0000212;gene_id=HG01258_ch_G0000078;Parent=HG01258_ch_T0000212;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000212:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8917681	8920477	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_154;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG01258_ch_G0000079;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000079;Name=TSPY8
HG01258_chrY	CAT	transcript	8917681	8920477	100	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_G0000079;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01258_ch_T0000213;Name=TSPY8
HG01258_chrY	CAT	exon	8917681	8918212	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8917727	8918212	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8917727	8917729	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000213;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918213	8918819	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000213:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8918820	8918897	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8918820	8918897	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918898	8919025	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000213:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919026	8919137	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919026	8919137	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919138	8919238	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000213:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919239	8919384	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919239	8919384	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919385	8919490	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000213:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919491	8919572	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919491	8919572	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919573	8920266	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000213:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8920267	8920477	.	+	.	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000213:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8920267	8920289	.	+	2	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000213:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8920287	8920289	.	+	0	source_transcript=hg002_chrY_paternal_154.1;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000213;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000213;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000213;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8917681	8920477	100	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_G0000079;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01258_ch_T0000214;Name=TSPY8
HG01258_chrY	CAT	exon	8917681	8918212	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8917727	8918212	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000214:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8917727	8917729	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000214;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918213	8918819	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000214:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8918820	8918897	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8918820	8918897	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000214:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918898	8919025	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000214:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919026	8919137	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919026	8919137	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000214:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919138	8919238	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000214:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919239	8919384	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919239	8919384	.	+	2	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000214:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919385	8919479	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000214:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919480	8919572	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919480	8919542	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000214:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8919540	8919542	.	+	0	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000214;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919573	8920266	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000214:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8920267	8920477	.	+	.	source_transcript=hg002_chrY_paternal_154.2;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000214;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000214;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000214:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8917681	8920477	100	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_G0000079;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=HG01258_ch_T0000215;Name=TSPY8
HG01258_chrY	CAT	exon	8917681	8918212	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8917727	8918212	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000215:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8917727	8917729	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000215;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918213	8918819	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000215:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8918820	8918897	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8918820	8918897	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000215:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918898	8919025	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000215:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919026	8919137	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919026	8919137	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000215:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919138	8919245	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000215:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919246	8919384	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919246	8919384	.	+	2	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000215:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919385	8919490	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000215:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919491	8919572	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8919491	8919542	.	+	1	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000215:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8919540	8919542	.	+	0	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000215;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919573	8920266	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000215:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8920267	8920477	.	+	.	source_transcript=hg002_chrY_paternal_154.3;source_transcript_name=hg002_chrY_paternal_154.4;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_154.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000215;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000215;transcript_name=hg002_chrY_paternal_154.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000215:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8917681	8920477	1000	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_G0000079;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=HG01258_ch_T0000216;Name=TSPY8
HG01258_chrY	CAT	exon	8917681	8918212	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918213	8918819	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000216:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8918820	8918897	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8918898	8919025	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000216:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919026	8919137	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919138	8919245	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000216:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919246	8919384	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919385	8919479	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000216:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8919480	8919572	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8919573	8920266	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000216:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8920267	8920477	.	+	.	source_transcript=hg002_chrY_paternal_154.4;source_transcript_name=hg002_chrY_paternal_154.1;source_gene=hg002_chrY_paternal_154;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_154;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_154.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_154.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000216;gene_id=HG01258_ch_G0000079;Parent=HG01258_ch_T0000216;transcript_name=hg002_chrY_paternal_154.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000216:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8929791	8935390	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=HG01258_ch_G0000080;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000080;Name=FAM197Y3
HG01258_chrY	CAT	transcript	8929791	8935390	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_G0000080;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000217;Name=FAM197Y3
HG01258_chrY	CAT	exon	8929791	8929850	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000217:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8929851	8933401	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000217:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8933402	8933560	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000217:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8933561	8935056	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000217:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8935057	8935202	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000217:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8935203	8935288	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000217:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8935289	8935390	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG01258_ch_T0000217;gene_id=HG01258_ch_G0000080;Parent=HG01258_ch_T0000217;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000217:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8938004	8940800	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_156;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=HG01258_ch_G0000081;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000081;Name=TSPY8
HG01258_chrY	CAT	transcript	8938004	8940800	100	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_G0000081;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=HG01258_ch_T0000218;Name=TSPY8
HG01258_chrY	CAT	exon	8938004	8938535	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8938050	8938535	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8938050	8938052	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000218;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8938536	8939142	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000218:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939143	8939220	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939143	8939220	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939221	8939348	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000218:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939349	8939460	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939349	8939460	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939461	8939561	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000218:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939562	8939707	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939562	8939707	.	+	2	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939708	8939813	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000218:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939814	8939895	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939814	8939895	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939896	8940589	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000218:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8940590	8940800	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000218:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8940590	8940612	.	+	2	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000218:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8940610	8940612	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000218;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000218;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000218;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8938004	8940800	100	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_G0000081;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=HG01258_ch_T0000219;Name=TSPY8
HG01258_chrY	CAT	exon	8938004	8938535	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8938050	8938535	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000219:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8938050	8938052	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000219;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8938536	8939142	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000219:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939143	8939220	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939143	8939220	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000219:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939221	8939348	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000219:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939349	8939460	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939349	8939460	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000219:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939461	8939561	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000219:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939562	8939707	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939562	8939707	.	+	2	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000219:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939708	8939802	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000219:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939803	8939895	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939803	8939865	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000219:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8939863	8939865	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000219;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939896	8940589	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000219:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8940590	8940800	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000219;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000219;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000219:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8938004	8940800	100	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_G0000081;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=HG01258_ch_T0000220;Name=TSPY8
HG01258_chrY	CAT	exon	8938004	8938535	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8938050	8938535	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000220:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8938050	8938052	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:HG01258_ch_T0000220;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8938536	8939142	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000220:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939143	8939220	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939143	8939220	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000220:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939221	8939348	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000220:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939349	8939460	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939349	8939460	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000220:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939461	8939568	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000220:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939569	8939707	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939569	8939707	.	+	2	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000220:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939708	8939813	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000220:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939814	8939895	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8939814	8939865	.	+	1	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:HG01258_ch_T0000220:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8939863	8939865	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:HG01258_ch_T0000220;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939896	8940589	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:HG01258_ch_T0000220:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8940590	8940800	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000220;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000220;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:HG01258_ch_T0000220:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8938004	8940800	1000	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_G0000081;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=HG01258_ch_T0000221;Name=TSPY8
HG01258_chrY	CAT	exon	8938004	8938535	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8938536	8939142	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000221:0;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939143	8939220	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939221	8939348	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000221:1;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939349	8939460	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939461	8939568	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000221:2;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939569	8939707	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939708	8939802	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000221:3;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8939803	8939895	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8939896	8940589	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:HG01258_ch_T0000221:4;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8940590	8940800	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000221;gene_id=HG01258_ch_G0000081;Parent=HG01258_ch_T0000221;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:HG01258_ch_T0000221:5;Name=TSPY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8950068	8955746	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_157.1;gene_id=HG01258_ch_G0000082;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000082;Name=FAM197Y2
HG01258_chrY	CAT	transcript	8950068	8955746	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_G0000082;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000222;Name=FAM197Y2
HG01258_chrY	CAT	exon	8950068	8950127	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000222:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8950128	8953677	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000222:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8953678	8953836	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000222:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8953837	8955323	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000222:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8955324	8955469	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000222:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8955470	8955555	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000222:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8955556	8955746	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000222;gene_id=HG01258_ch_G0000082;Parent=HG01258_ch_T0000222;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000222:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8958271	8961067	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;gene_id=HG01258_ch_G0000083;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000083;Name=TSPY1
HG01258_chrY	CAT	transcript	8958271	8961067	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000223;Name=TSPY1
HG01258_chrY	CAT	exon	8958271	8958802	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8958317	8958802	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000223:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8958317	8958319	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000223;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958803	8959409	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000223:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959410	8959487	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959410	8959487	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000223:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959488	8959615	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000223:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959616	8959727	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959616	8959727	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000223:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959728	8959828	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000223:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959829	8959974	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959829	8959974	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000223:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959975	8960069	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000223:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960070	8960162	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960070	8960132	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000223:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8960130	8960132	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000223;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8960163	8960856	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000223:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960857	8961067	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000223;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000223;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000223:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8958271	8961067	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000224;Name=TSPY1
HG01258_chrY	CAT	exon	8958271	8958403	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8958317	8958403	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8958317	8958319	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000224;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958404	8958664	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8958665	8958802	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8958665	8958802	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958803	8959409	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959410	8959487	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959410	8959487	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959488	8959615	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959616	8959727	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959616	8959727	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959728	8959828	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959829	8959974	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959829	8959974	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959975	8960080	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960081	8960162	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960081	8960162	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8960163	8960856	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000224:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960857	8961067	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000224:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960857	8960879	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000224:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8960877	8960879	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000224;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000224;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000224;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8958271	8961067	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000225;Name=TSPY1
HG01258_chrY	CAT	exon	8958271	8958802	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8958317	8958802	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8958317	8958319	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000225;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958803	8959409	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959410	8959487	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959410	8959487	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959488	8959615	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959616	8959727	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959616	8959727	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959728	8959828	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959829	8959974	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959829	8959974	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959975	8960080	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960081	8960162	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960081	8960162	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8960163	8960856	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960857	8961067	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000225:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960857	8960879	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000225:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8960877	8960879	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000225;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000225;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000225;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8958271	8961067	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000226;Name=TSPY1
HG01258_chrY	CAT	exon	8958271	8958802	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8958317	8958802	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8958317	8958319	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000226;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958803	8959409	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959410	8959487	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959410	8959487	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959488	8959615	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959616	8959727	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959616	8959727	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959728	8959835	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959836	8959974	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8959836	8959974	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959975	8960080	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960081	8960162	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8960081	8960132	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8960130	8960132	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000226;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8960163	8960856	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960857	8961067	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000226;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000226;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000226:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8958271	8961067	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_G0000083;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG01258_ch_T0000227;Name=TSPY1
HG01258_chrY	CAT	exon	8958271	8958802	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8958803	8959409	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000227:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959410	8959487	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959488	8959615	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000227:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959616	8959727	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959728	8959835	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000227:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8959836	8959974	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8959975	8960069	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000227:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960070	8960162	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8960163	8960856	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000227:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8960857	8961067	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000227;gene_id=HG01258_ch_G0000083;Parent=HG01258_ch_T0000227;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000227:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8970366	8976054	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;gene_id=HG01258_ch_G0000084;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000084;Name=FAM197Y2
HG01258_chrY	CAT	transcript	8970366	8976054	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_G0000084;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000228;Name=FAM197Y2
HG01258_chrY	CAT	exon	8970366	8970425	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000228:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8970426	8973974	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000228:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8973975	8974133	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000228:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8974134	8975631	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000228:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8975632	8975777	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000228:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8975778	8975863	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000228:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8975864	8976054	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG01258_ch_T0000228;gene_id=HG01258_ch_G0000084;Parent=HG01258_ch_T0000228;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000228:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8978578	8981392	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_160;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;gene_id=HG01258_ch_G0000085;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000085;Name=TSPY4
HG01258_chrY	CAT	transcript	8978578	8981392	100	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01258_ch_T0000229;Name=TSPY4
HG01258_chrY	CAT	exon	8978578	8979127	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8978624	8979127	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8978624	8978626	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000229;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979128	8979734	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979735	8979812	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979735	8979812	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979813	8979940	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979941	8980052	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979941	8980052	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980053	8980153	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980154	8980299	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980154	8980299	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980300	8980405	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980406	8980487	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980406	8980487	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980488	8981181	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8981182	8981392	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000229:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8981182	8981204	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000229:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8981202	8981204	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000229;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000229;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000229;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8978578	8981392	100	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01258_ch_T0000230;Name=TSPY4
HG01258_chrY	CAT	exon	8978578	8979127	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8978624	8979127	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8978624	8978626	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000230;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979128	8979734	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979735	8979812	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979735	8979812	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979813	8979940	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979941	8980052	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979941	8980052	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980053	8980153	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980154	8980299	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980154	8980299	.	+	2	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980300	8980394	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980395	8980487	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980395	8980457	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8980455	8980457	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000230;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980488	8981181	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8981182	8981392	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000230;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000230;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000230:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8978578	8981392	100	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG01258_ch_T0000231;Name=TSPY4
HG01258_chrY	CAT	exon	8978578	8979127	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8978624	8979127	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8978624	8978626	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979128	8979734	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979735	8979812	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979735	8979812	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979813	8979940	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979941	8980052	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8979941	8980052	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980053	8980160	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980161	8980299	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980161	8980299	.	+	2	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980300	8980405	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980406	8980487	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8980406	8980457	.	+	1	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	8980455	8980457	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980488	8981181	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8981182	8981392	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000231;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000231;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000231:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8978578	8981392	1000	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_G0000085;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=HG01258_ch_T0000232;Name=TSPY4
HG01258_chrY	CAT	exon	8978578	8979127	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979128	8979734	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979735	8979812	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8979813	8979940	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8979941	8980052	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980053	8980160	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980161	8980299	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980300	8980394	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8980395	8980487	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8980488	8981181	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8981182	8981392	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000232;gene_id=HG01258_ch_G0000085;Parent=HG01258_ch_T0000232;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000232:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8990697	8996297	.	-	.	source_gene_common_name=FAM197Y8;source_gene=hg002_chrY_paternal_161;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;gene_id=HG01258_ch_G0000086;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG01258_ch_G0000086;Name=FAM197Y8
HG01258_chrY	CAT	transcript	8990697	8996297	1000	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_G0000086;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=HG01258_ch_T0000233;Name=FAM197Y8
HG01258_chrY	CAT	exon	8990697	8990756	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG01258_ch_T0000233:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8990757	8994306	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG01258_ch_T0000233:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8994307	8994465	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG01258_ch_T0000233:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8994466	8995963	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG01258_ch_T0000233:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8995964	8996109	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG01258_ch_T0000233:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8996110	8996195	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG01258_ch_T0000233:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	8996196	8996297	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG01258_ch_T0000233;gene_id=HG01258_ch_G0000086;Parent=HG01258_ch_T0000233;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG01258_ch_T0000233:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	8998910	9001724	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_162;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;gene_id=HG01258_ch_G0000087;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000087;Name=TSPY9
HG01258_chrY	CAT	transcript	8998910	9001724	100	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG01258_ch_T0000234;Name=TSPY9
HG01258_chrY	CAT	exon	8998910	8999459	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8998956	8999459	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8998956	8998958	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000234;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8999460	9000066	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000234:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000067	9000144	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000067	9000144	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000145	9000272	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000234:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000273	9000384	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000273	9000384	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000385	9000485	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000234:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000486	9000631	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000486	9000631	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000632	9000737	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000234:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000738	9000819	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000738	9000819	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000820	9001513	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000234:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9001514	9001724	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000234:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9001514	9001536	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000234:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9001534	9001536	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000234;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000234;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000234;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	8998910	9001724	100	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG01258_ch_T0000235;Name=TSPY9
HG01258_chrY	CAT	exon	8998910	8999459	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	8998956	8999459	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000235:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	8998956	8998958	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000235;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	8999460	9000066	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000235:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000067	9000144	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000067	9000144	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000235:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000145	9000272	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000235:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000273	9000384	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000273	9000384	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000235:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000385	9000485	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000235:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000486	9000631	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000486	9000631	.	+	2	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000235:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000632	9000726	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000235:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9000727	9000819	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9000727	9000789	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000235:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9000787	9000789	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000235;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9000820	9001513	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000235:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9001514	9001724	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000235;gene_id=HG01258_ch_G0000087;Parent=HG01258_ch_T0000235;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000235:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9010989	9016677	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_165;alternative_source_transcripts=hg002_chrY_paternal_163.1;gene_id=HG01258_ch_G0000088;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000088;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9010989	9016677	1000	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_G0000088;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000236;Name=FAM197Y2
HG01258_chrY	CAT	exon	9010989	9011048	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000236:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9011049	9014597	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000236:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9014598	9014756	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000236:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9014757	9016254	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000236:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9016255	9016400	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000236:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9016401	9016486	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000236:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9016487	9016677	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1;transcript_id=HG01258_ch_T0000236;gene_id=HG01258_ch_G0000088;Parent=HG01258_ch_T0000236;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000236:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9019201	9021997	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_164;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;gene_id=HG01258_ch_G0000089;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000089;Name=TSPY3
HG01258_chrY	CAT	transcript	9019201	9021997	100	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_G0000089;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG01258_ch_T0000237;Name=TSPY3
HG01258_chrY	CAT	exon	9019201	9019732	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9019247	9019732	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9019247	9019249	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000237;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9019733	9020339	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000237:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020340	9020417	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020340	9020417	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020418	9020545	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000237:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020546	9020657	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020546	9020657	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020658	9020758	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000237:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020759	9020904	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020759	9020904	.	+	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020905	9021010	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000237:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021011	9021092	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9021011	9021092	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9021093	9021786	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000237:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021787	9021997	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000237:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9021787	9021809	.	+	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000237:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9021807	9021809	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000237;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000237;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000237;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9019201	9021997	100	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_G0000089;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG01258_ch_T0000238;Name=TSPY3
HG01258_chrY	CAT	exon	9019201	9019732	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9019247	9019732	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000238:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9019247	9019249	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000238;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9019733	9020339	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000238:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020340	9020417	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020340	9020417	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000238:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020418	9020545	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000238:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020546	9020657	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020546	9020657	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000238:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020658	9020758	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000238:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020759	9020904	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020759	9020904	.	+	2	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000238:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020905	9020999	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000238:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021000	9021092	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9021000	9021062	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000238:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9021060	9021062	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000238;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9021093	9021786	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000238:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021787	9021997	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000238;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000238;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000238:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9019201	9021997	100	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_G0000089;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG01258_ch_T0000239;Name=TSPY3
HG01258_chrY	CAT	exon	9019201	9019732	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9019247	9019732	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000239:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9019247	9019249	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000239;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9019733	9020339	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000239:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020340	9020417	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020340	9020417	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000239:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020418	9020545	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000239:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020546	9020657	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020546	9020657	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000239:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020658	9020765	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000239:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020766	9020904	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9020766	9020904	.	+	2	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000239:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020905	9021010	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000239:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021011	9021092	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9021011	9021062	.	+	1	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000239:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9021060	9021062	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000239;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9021093	9021786	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000239:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021787	9021997	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000239;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000239;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000239:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9019201	9021997	1000	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_G0000089;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=HG01258_ch_T0000240;Name=TSPY3
HG01258_chrY	CAT	exon	9019201	9019732	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9019733	9020339	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000240:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020340	9020417	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020418	9020545	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000240:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020546	9020657	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020658	9020765	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000240:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9020766	9020904	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9020905	9020999	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000240:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021000	9021092	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9021093	9021786	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000240:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9021787	9021997	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000240;gene_id=HG01258_ch_G0000089;Parent=HG01258_ch_T0000240;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000240:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9031262	9036867	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;alternative_source_transcripts=hg002_chrY_paternal_167.1;gene_id=HG01258_ch_G0000090;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000090;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9031262	9036867	1000	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_G0000090;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000241;Name=FAM197Y3
HG01258_chrY	CAT	exon	9031262	9031321	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000241:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9031322	9034872	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000241:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9034873	9035031	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000241:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9035032	9036533	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000241:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9036534	9036679	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000241:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9036680	9036765	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000241:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9036766	9036867	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1;transcript_id=HG01258_ch_T0000241;gene_id=HG01258_ch_G0000090;Parent=HG01258_ch_T0000241;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000241:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9039480	9042276	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;gene_id=HG01258_ch_G0000091;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000091;Name=TSPY10
HG01258_chrY	CAT	transcript	9039480	9042276	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_G0000091;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01258_ch_T0000242;Name=TSPY10
HG01258_chrY	CAT	exon	9039480	9040011	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9039526	9040011	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9039526	9039528	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000242;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040012	9040618	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000242:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040619	9040696	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040619	9040696	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040697	9040824	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000242:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040825	9040936	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040825	9040936	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040937	9041037	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000242:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041038	9041183	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041038	9041183	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041184	9041289	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000242:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041290	9041371	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041290	9041371	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041372	9042065	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000242:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9042066	9042276	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000242:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9042066	9042088	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000242:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9042086	9042088	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_166.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000242;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000242;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000242;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9039480	9042276	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_G0000091;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01258_ch_T0000243;Name=TSPY10
HG01258_chrY	CAT	exon	9039480	9040011	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9039526	9040011	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000243:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9039526	9039528	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000243;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040012	9040618	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000243:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040619	9040696	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040619	9040696	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000243:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040697	9040824	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000243:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040825	9040936	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040825	9040936	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000243:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040937	9041037	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000243:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041038	9041183	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041038	9041183	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000243:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041184	9041278	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000243:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041279	9041371	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041279	9041341	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000243:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9041339	9041341	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000243;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041372	9042065	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000243:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9042066	9042276	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_166.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000243;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000243;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000243:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9039480	9042276	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_G0000091;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG01258_ch_T0000244;Name=TSPY10
HG01258_chrY	CAT	exon	9039480	9040011	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9039526	9040011	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000244:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9039526	9039528	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000244;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040012	9040618	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000244:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040619	9040696	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040619	9040696	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000244:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040697	9040824	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000244:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040825	9040936	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9040825	9040936	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000244:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040937	9041044	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000244:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041045	9041183	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041045	9041183	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000244:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041184	9041289	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000244:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041290	9041371	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9041290	9041341	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000244:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9041339	9041341	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000244;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041372	9042065	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000244:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9042066	9042276	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_166.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000244;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000244;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000244:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9039480	9042276	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_G0000091;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=HG01258_ch_T0000245;Name=TSPY10
HG01258_chrY	CAT	exon	9039480	9040011	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040012	9040618	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000245:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040619	9040696	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040697	9040824	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000245:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9040825	9040936	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9040937	9041044	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000245:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041045	9041183	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041184	9041278	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000245:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9041279	9041371	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9041372	9042065	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000245:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9042066	9042276	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_166.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000245;gene_id=HG01258_ch_G0000091;Parent=HG01258_ch_T0000245;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000245:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9051548	9057148	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_169;alternative_source_transcripts=hg002_chrY_paternal_169.1;gene_id=HG01258_ch_G0000092;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000092;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9051548	9057148	1000	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_G0000092;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000246;Name=FAM197Y3
HG01258_chrY	CAT	exon	9051548	9051607	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000246:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9051608	9055155	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000246:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9055156	9055314	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000246:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9055315	9056814	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000246:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9056815	9056960	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000246:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9056961	9057046	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000246:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9057047	9057148	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1;transcript_id=HG01258_ch_T0000246;gene_id=HG01258_ch_G0000092;Parent=HG01258_ch_T0000246;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000246:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9059757	9062553	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;gene_id=HG01258_ch_G0000093;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000093;Name=TSPY10
HG01258_chrY	CAT	transcript	9059757	9062553	100	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01258_ch_T0000247;Name=TSPY10
HG01258_chrY	CAT	exon	9059757	9060288	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9059803	9060288	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9059803	9059805	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000247;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060289	9060895	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9060896	9060973	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9060896	9060973	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060974	9061101	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061102	9061213	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061102	9061213	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061214	9061314	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061315	9061460	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061315	9061460	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061461	9061566	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061567	9061648	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061567	9061648	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061649	9062342	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9062343	9062553	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000247:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9062343	9062365	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000247:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9062363	9062365	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_168.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000247;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000247;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000247;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9059757	9062553	100	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01258_ch_T0000248;Name=TSPY10
HG01258_chrY	CAT	exon	9059757	9060288	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9059803	9060288	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9059803	9059805	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060289	9060895	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9060896	9060973	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9060896	9060973	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060974	9061101	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061102	9061213	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061102	9061213	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061214	9061314	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061315	9061460	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061315	9061460	.	+	2	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061461	9061555	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061556	9061648	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061556	9061618	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9061616	9061618	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061649	9062342	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9062343	9062553	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_168.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000248;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9059757	9062553	100	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG01258_ch_T0000249;Name=TSPY10
HG01258_chrY	CAT	exon	9059757	9060288	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9059803	9060288	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9059803	9059805	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060289	9060895	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9060896	9060973	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9060896	9060973	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060974	9061101	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061102	9061213	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061102	9061213	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061214	9061321	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061322	9061460	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061322	9061460	.	+	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061461	9061566	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061567	9061648	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9061567	9061618	.	+	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9061616	9061618	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061649	9062342	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9062343	9062553	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000249;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9059757	9062553	1000	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_G0000093;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=HG01258_ch_T0000250;Name=TSPY10
HG01258_chrY	CAT	exon	9059757	9060288	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060289	9060895	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9060896	9060973	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9060974	9061101	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061102	9061213	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061214	9061321	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061322	9061460	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061461	9061555	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9061556	9061648	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9061649	9062342	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9062343	9062553	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000250;gene_id=HG01258_ch_G0000093;Parent=HG01258_ch_T0000250;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000250:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9071829	9077522	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_173;alternative_source_transcripts=hg002_chrY_paternal_171.1;gene_id=HG01258_ch_G0000094;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000094;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9071829	9077522	1000	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_G0000094;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000251;Name=FAM197Y2
HG01258_chrY	CAT	exon	9071829	9071888	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000251:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9071889	9075438	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000251:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9075439	9075597	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000251:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9075598	9077099	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000251:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9077100	9077245	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000251:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9077246	9077331	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000251:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9077332	9077522	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=HG01258_ch_T0000251;gene_id=HG01258_ch_G0000094;Parent=HG01258_ch_T0000251;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000251:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9080046	9082842	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_172;alternative_source_transcripts=hg002_chrY_paternal_172.1;gene_id=HG01258_ch_G0000095;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000095;Name=TSPY10
HG01258_chrY	CAT	transcript	9080046	9082842	100	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_G0000095;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG01258_ch_T0000252;Name=TSPY10
HG01258_chrY	CAT	exon	9080046	9080577	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9080092	9080577	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9080092	9080094	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000252;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9080578	9081184	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081185	9081262	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081185	9081262	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081263	9081390	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081391	9081502	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081391	9081502	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081503	9081603	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081604	9081749	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081604	9081749	.	+	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081750	9081855	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081856	9081937	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081856	9081937	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081938	9082631	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9082632	9082842	.	+	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000252:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9082632	9082654	.	+	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000252:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9082652	9082654	.	+	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000252;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000252;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000252;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9080046	9082842	100	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_G0000095;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG01258_ch_T0000253;Name=TSPY10
HG01258_chrY	CAT	exon	9080046	9080577	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9080092	9080577	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9080092	9080094	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9080578	9081184	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081185	9081262	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081185	9081262	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081263	9081390	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081391	9081502	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081391	9081502	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081503	9081603	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081604	9081749	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081604	9081749	.	+	2	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081750	9081844	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081845	9081937	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081845	9081907	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9081905	9081907	.	+	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081938	9082631	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9082632	9082842	.	+	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000253;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000253;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9080046	9082842	100	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_G0000095;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=HG01258_ch_T0000254;Name=TSPY10
HG01258_chrY	CAT	exon	9080046	9080577	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9080092	9080577	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9080092	9080094	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9080578	9081184	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081185	9081262	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081185	9081262	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081263	9081390	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081391	9081502	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081391	9081502	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081503	9081610	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081611	9081749	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081611	9081749	.	+	2	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081750	9081855	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081856	9081937	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9081856	9081907	.	+	1	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9081905	9081907	.	+	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081938	9082631	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9082632	9082842	.	+	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000254;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000254;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9080046	9082842	1000	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_G0000095;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=HG01258_ch_T0000255;Name=TSPY10
HG01258_chrY	CAT	exon	9080046	9080577	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9080578	9081184	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081185	9081262	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081263	9081390	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081391	9081502	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081503	9081610	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081611	9081749	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081750	9081844	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9081845	9081937	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9081938	9082631	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9082632	9082842	.	+	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000255;gene_id=HG01258_ch_G0000095;Parent=HG01258_ch_T0000255;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000255:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9092107	9097712	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;gene_id=HG01258_ch_G0000096;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000096;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9092107	9097712	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_G0000096;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000256;Name=FAM197Y3
HG01258_chrY	CAT	exon	9092107	9092166	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000256:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9092167	9095717	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000256:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9095718	9095876	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000256:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9095877	9097378	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000256:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9097379	9097524	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000256:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9097525	9097610	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000256:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9097611	9097712	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000256;gene_id=HG01258_ch_G0000096;Parent=HG01258_ch_T0000256;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000256:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9100325	9103121	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_174.1;gene_id=HG01258_ch_G0000097;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000097;Name=TSPY10
HG01258_chrY	CAT	transcript	9100325	9103121	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_G0000097;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000257;Name=TSPY10
HG01258_chrY	CAT	exon	9100325	9100856	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9100371	9100856	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9100371	9100373	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000257;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9100857	9101463	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101464	9101541	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101464	9101541	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101542	9101669	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101670	9101781	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101670	9101781	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101782	9101882	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101883	9102028	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101883	9102028	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102029	9102134	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102135	9102216	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9102135	9102216	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102217	9102910	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102911	9103121	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000257:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9102911	9102933	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000257:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9102931	9102933	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1;transcript_id=HG01258_ch_T0000257;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000257;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000257;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9100325	9103121	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_G0000097;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000258;Name=TSPY10
HG01258_chrY	CAT	exon	9100325	9100856	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9100371	9100856	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9100371	9100373	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9100857	9101463	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101464	9101541	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101464	9101541	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101542	9101669	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101670	9101781	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101670	9101781	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101782	9101882	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101883	9102028	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101883	9102028	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102029	9102123	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102124	9102216	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9102124	9102186	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9102184	9102186	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102217	9102910	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102911	9103121	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2;transcript_id=HG01258_ch_T0000258;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9100325	9103121	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_G0000097;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000259;Name=TSPY10
HG01258_chrY	CAT	exon	9100325	9100856	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9100371	9100856	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9100371	9100373	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9100857	9101463	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101464	9101541	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101464	9101541	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101542	9101669	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101670	9101781	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101670	9101781	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101782	9101889	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101890	9102028	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9101890	9102028	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102029	9102134	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102135	9102216	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9102135	9102186	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9102184	9102186	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102217	9102910	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102911	9103121	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3;transcript_id=HG01258_ch_T0000259;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9100325	9103121	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_G0000097;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000260;Name=TSPY10
HG01258_chrY	CAT	exon	9100325	9100856	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9100857	9101463	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101464	9101541	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101542	9101669	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101670	9101781	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9101782	9101889	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9101890	9102028	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102029	9102123	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102124	9102216	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9102217	9102910	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9102911	9103121	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4;transcript_id=HG01258_ch_T0000260;gene_id=HG01258_ch_G0000097;Parent=HG01258_ch_T0000260;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9120602	9123398	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_176.1;gene_id=HG01258_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000098;Name=TSPY10
HG01258_chrY	CAT	transcript	9120602	9123398	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_G0000098;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000261;Name=TSPY10
HG01258_chrY	CAT	exon	9120602	9121133	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9120648	9121133	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9120648	9120650	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121134	9121740	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121741	9121818	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121741	9121818	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121819	9121946	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121947	9122058	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121947	9122058	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122059	9122159	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122160	9122305	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122160	9122305	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122306	9122411	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122412	9122493	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122412	9122493	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122494	9123187	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9123188	9123398	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9123188	9123210	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9123208	9123210	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.1;transcript_id=HG01258_ch_T0000261;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9120602	9123398	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_G0000098;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000262;Name=TSPY10
HG01258_chrY	CAT	exon	9120602	9121133	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9120648	9121133	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9120648	9120650	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000262;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121134	9121740	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121741	9121818	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121741	9121818	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121819	9121946	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121947	9122058	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121947	9122058	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122059	9122159	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122160	9122305	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122160	9122305	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122306	9122400	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122401	9122493	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122401	9122463	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9122461	9122463	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000262;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122494	9123187	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9123188	9123398	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.2;transcript_id=HG01258_ch_T0000262;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000262;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000262:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9120602	9123398	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_G0000098;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000263;Name=TSPY10
HG01258_chrY	CAT	exon	9120602	9121133	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9120648	9121133	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9120648	9120650	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121134	9121740	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121741	9121818	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121741	9121818	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121819	9121946	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121947	9122058	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9121947	9122058	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122059	9122166	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122167	9122305	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122167	9122305	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122306	9122411	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122412	9122493	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9122412	9122463	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9122461	9122463	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122494	9123187	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9123188	9123398	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.3;transcript_id=HG01258_ch_T0000263;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000263;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9120602	9123398	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_G0000098;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000264;Name=TSPY10
HG01258_chrY	CAT	exon	9120602	9121133	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121134	9121740	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121741	9121818	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9121819	9121946	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9121947	9122058	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122059	9122166	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122167	9122305	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122306	9122400	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9122401	9122493	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9122494	9123187	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9123188	9123398	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_176.4;transcript_id=HG01258_ch_T0000264;gene_id=HG01258_ch_G0000098;Parent=HG01258_ch_T0000264;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9132674	9138367	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_171;gene_id=HG01258_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000099;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9132674	9138367	1000	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_G0000099;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000265;Name=FAM197Y2
HG01258_chrY	CAT	exon	9132674	9132733	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000265:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9132734	9136283	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000265:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9136284	9136442	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000265:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9136443	9137944	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000265:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9137945	9138090	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000265:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9138091	9138176	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000265:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9138177	9138367	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000265;gene_id=HG01258_ch_G0000099;Parent=HG01258_ch_T0000265;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000265:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9140891	9143687	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_178.1;gene_id=HG01258_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000100;Name=TSPY10
HG01258_chrY	CAT	transcript	9140891	9143687	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_G0000100;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000266;Name=TSPY10
HG01258_chrY	CAT	exon	9140891	9141422	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9140937	9141422	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9140937	9140939	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9141423	9142029	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142030	9142107	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142030	9142107	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142108	9142235	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142236	9142347	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142236	9142347	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142348	9142448	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142449	9142594	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142449	9142594	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142595	9142700	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142701	9142782	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142701	9142782	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142783	9143476	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9143477	9143687	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9143477	9143499	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9143497	9143499	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000266;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000266;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9140891	9143687	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_G0000100;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000267;Name=TSPY10
HG01258_chrY	CAT	exon	9140891	9141422	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9140937	9141422	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9140937	9140939	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000267;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9141423	9142029	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142030	9142107	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142030	9142107	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142108	9142235	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142236	9142347	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142236	9142347	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142348	9142448	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142449	9142594	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142449	9142594	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142595	9142689	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142690	9142782	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142690	9142752	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9142750	9142752	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000267;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142783	9143476	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9143477	9143687	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000267;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000267;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000267:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9140891	9143687	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_G0000100;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000268;Name=TSPY10
HG01258_chrY	CAT	exon	9140891	9141422	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9140937	9141422	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9140937	9140939	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9141423	9142029	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142030	9142107	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142030	9142107	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142108	9142235	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142236	9142347	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142236	9142347	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142348	9142455	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142456	9142594	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142456	9142594	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142595	9142700	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142701	9142782	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9142701	9142752	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9142750	9142752	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142783	9143476	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9143477	9143687	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000268;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000268;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000268:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9140891	9143687	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_G0000100;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000269;Name=TSPY10
HG01258_chrY	CAT	exon	9140891	9141422	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9141423	9142029	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142030	9142107	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142108	9142235	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142236	9142347	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142348	9142455	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142456	9142594	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142595	9142689	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9142690	9142782	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9142783	9143476	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9143477	9143687	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000269;gene_id=HG01258_ch_G0000100;Parent=HG01258_ch_T0000269;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000269:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9152948	9158630	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;gene_id=HG01258_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000101;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9152948	9158630	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_G0000101;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000270;Name=FAM197Y2
HG01258_chrY	CAT	exon	9152948	9153007	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000270:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9153008	9156556	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000270:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9156557	9156715	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000270:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9156716	9158207	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000270:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9158208	9158353	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000270:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9158354	9158439	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000270:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9158440	9158630	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000270;gene_id=HG01258_ch_G0000101;Parent=HG01258_ch_T0000270;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000270:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9161154	9163968	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_174;alternative_source_transcripts=hg002_chrY_paternal_180.1;gene_id=HG01258_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000102;Name=TSPY4
HG01258_chrY	CAT	transcript	9161154	9163968	100	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_G0000102;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000271;Name=TSPY4
HG01258_chrY	CAT	exon	9161154	9161703	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9161200	9161703	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9161200	9161202	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000271;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9161704	9162310	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162311	9162388	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162311	9162388	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162389	9162516	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162517	9162628	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162517	9162628	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162629	9162729	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162730	9162875	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162730	9162875	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162876	9162981	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162982	9163063	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162982	9163063	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9163064	9163757	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9163758	9163968	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000271:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9163758	9163780	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000271:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9163778	9163780	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000271;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000271;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000271;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9161154	9163968	100	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_G0000102;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000272;Name=TSPY4
HG01258_chrY	CAT	exon	9161154	9161703	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9161200	9161703	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9161200	9161202	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000272;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9161704	9162310	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162311	9162388	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162311	9162388	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162389	9162516	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162517	9162628	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162517	9162628	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162629	9162729	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162730	9162875	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162730	9162875	.	+	2	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162876	9162970	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162971	9163063	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162971	9163033	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9163031	9163033	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000272;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9163064	9163757	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9163758	9163968	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000272;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000272;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000272:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9161154	9163968	100	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_G0000102;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000273;Name=TSPY4
HG01258_chrY	CAT	exon	9161154	9161703	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9161200	9161703	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9161200	9161202	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9161704	9162310	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162311	9162388	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162311	9162388	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162389	9162516	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162517	9162628	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162517	9162628	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162629	9162736	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162737	9162875	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162737	9162875	.	+	2	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162876	9162981	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162982	9163063	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9162982	9163033	.	+	1	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9163031	9163033	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9163064	9163757	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9163758	9163968	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000273;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000273;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9161154	9163968	1000	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_G0000102;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=HG01258_ch_T0000274;Name=TSPY4
HG01258_chrY	CAT	exon	9161154	9161703	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9161704	9162310	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162311	9162388	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162389	9162516	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162517	9162628	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162629	9162736	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162737	9162875	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9162876	9162970	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9162971	9163063	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9163064	9163757	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9163758	9163968	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000274;gene_id=HG01258_ch_G0000102;Parent=HG01258_ch_T0000274;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9173270	9178958	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_175;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;gene_id=HG01258_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000103;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9173270	9178958	1000	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_G0000103;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000275;Name=FAM197Y2
HG01258_chrY	CAT	exon	9173270	9173329	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000275:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9173330	9176878	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000275:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9176879	9177037	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000275:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9177038	9178535	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000275:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9178536	9178681	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000275:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9178682	9178767	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000275:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9178768	9178958	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_157.1;transcript_id=HG01258_ch_T0000275;gene_id=HG01258_ch_G0000103;Parent=HG01258_ch_T0000275;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000275:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9181482	9184278	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_186;alternative_source_transcripts=hg002_chrY_paternal_182.1;gene_id=HG01258_ch_G0000104;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000104;Name=TSPY3
HG01258_chrY	CAT	transcript	9181482	9184278	100	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_G0000104;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=HG01258_ch_T0000276;Name=TSPY3
HG01258_chrY	CAT	exon	9181482	9182013	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9181528	9182013	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9181528	9181530	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000276;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182014	9182620	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000276:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182621	9182698	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182621	9182698	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182699	9182826	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000276:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182827	9182938	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182827	9182938	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182939	9183039	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000276:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183040	9183185	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183040	9183185	.	+	2	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183186	9183291	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000276:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183292	9183373	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183292	9183373	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183374	9184067	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000276:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9184068	9184278	.	+	.	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000276:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9184068	9184090	.	+	2	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000276:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9184088	9184090	.	+	0	source_transcript=hg002_chrY_paternal_186.1;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000276;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000276;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000276;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9181482	9184278	100	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_G0000104;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=HG01258_ch_T0000277;Name=TSPY3
HG01258_chrY	CAT	exon	9181482	9182013	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9181528	9182013	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000277:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9181528	9181530	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000277;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182014	9182620	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000277:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182621	9182698	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182621	9182698	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000277:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182699	9182826	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000277:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182827	9182938	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182827	9182938	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000277:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182939	9183039	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000277:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183040	9183185	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183040	9183185	.	+	2	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000277:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183186	9183280	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000277:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183281	9183373	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183281	9183343	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000277:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9183341	9183343	.	+	0	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000277;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183374	9184067	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000277:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9184068	9184278	.	+	.	source_transcript=hg002_chrY_paternal_186.2;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000277;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000277;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000277:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9181482	9184278	100	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_G0000104;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=HG01258_ch_T0000278;Name=TSPY3
HG01258_chrY	CAT	exon	9181482	9182013	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9181528	9182013	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000278:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9181528	9181530	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000278;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182014	9182620	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000278:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182621	9182698	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182621	9182698	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000278:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182699	9182826	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000278:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182827	9182938	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9182827	9182938	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000278:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182939	9183046	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000278:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183047	9183185	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183047	9183185	.	+	2	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000278:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183186	9183291	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000278:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183292	9183373	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9183292	9183343	.	+	1	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000278:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9183341	9183343	.	+	0	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000278;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183374	9184067	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000278:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9184068	9184278	.	+	.	source_transcript=hg002_chrY_paternal_186.3;source_transcript_name=hg002_chrY_paternal_186.4;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_186.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000278;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000278;transcript_name=hg002_chrY_paternal_186.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000278:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9181482	9184278	1000	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_G0000104;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=HG01258_ch_T0000279;Name=TSPY3
HG01258_chrY	CAT	exon	9181482	9182013	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182014	9182620	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000279:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182621	9182698	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182699	9182826	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000279:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9182827	9182938	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9182939	9183046	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000279:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183047	9183185	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183186	9183280	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000279:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9183281	9183373	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9183374	9184067	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000279:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9184068	9184278	.	+	.	source_transcript=hg002_chrY_paternal_186.4;source_transcript_name=hg002_chrY_paternal_186.1;source_gene=hg002_chrY_paternal_186;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_186;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_186.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_186.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000279;gene_id=HG01258_ch_G0000104;Parent=HG01258_ch_T0000279;transcript_name=hg002_chrY_paternal_186.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000279:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9193541	9199233	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_183;gene_id=HG01258_ch_G0000105;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000105;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9193541	9199233	1000	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_G0000105;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000280;Name=FAM197Y2
HG01258_chrY	CAT	exon	9193541	9193600	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000280:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9193601	9197151	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000280:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9197152	9197310	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000280:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9197311	9198810	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000280:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9198811	9198956	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000280:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9198957	9199042	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000280:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9199043	9199233	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=299.82;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000280;gene_id=HG01258_ch_G0000105;Parent=HG01258_ch_T0000280;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000280:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9201757	9204553	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_184.1;gene_id=HG01258_ch_G0000106;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000106;Name=TSPY10
HG01258_chrY	CAT	transcript	9201757	9204553	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_G0000106;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000281;Name=TSPY10
HG01258_chrY	CAT	exon	9201757	9202288	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9201803	9202288	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9201803	9201805	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000281;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202289	9202895	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000281:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9202896	9202973	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9202896	9202973	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202974	9203101	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000281:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203102	9203213	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203102	9203213	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203214	9203314	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000281:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203315	9203460	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203315	9203460	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203461	9203566	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000281:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203567	9203648	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203567	9203648	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203649	9204342	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000281:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9204343	9204553	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000281:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9204343	9204365	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000281:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9204363	9204365	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1;transcript_id=HG01258_ch_T0000281;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000281;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000281;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9201757	9204553	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_G0000106;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000282;Name=TSPY10
HG01258_chrY	CAT	exon	9201757	9202288	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9201803	9202288	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9201803	9201805	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000282;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202289	9202895	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9202896	9202973	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9202896	9202973	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202974	9203101	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203102	9203213	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203102	9203213	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203214	9203314	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203315	9203460	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203315	9203460	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203461	9203555	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203556	9203648	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203556	9203618	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9203616	9203618	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000282;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203649	9204342	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9204343	9204553	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2;transcript_id=HG01258_ch_T0000282;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000282;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000282:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9201757	9204553	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_G0000106;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000283;Name=TSPY10
HG01258_chrY	CAT	exon	9201757	9202288	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9201803	9202288	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9201803	9201805	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000283;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202289	9202895	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9202896	9202973	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9202896	9202973	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202974	9203101	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203102	9203213	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203102	9203213	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203214	9203321	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203322	9203460	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203322	9203460	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203461	9203566	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203567	9203648	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9203567	9203618	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9203616	9203618	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000283;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203649	9204342	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9204343	9204553	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG01258_ch_T0000283;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000283;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000283:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9201757	9204553	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_G0000106;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000284;Name=TSPY10
HG01258_chrY	CAT	exon	9201757	9202288	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202289	9202895	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000284:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9202896	9202973	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9202974	9203101	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000284:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203102	9203213	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203214	9203321	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000284:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203322	9203460	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203461	9203555	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000284:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9203556	9203648	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9203649	9204342	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000284:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9204343	9204553	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG01258_ch_T0000284;gene_id=HG01258_ch_G0000106;Parent=HG01258_ch_T0000284;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000284:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9213825	9219425	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;gene_id=HG01258_ch_G0000107;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000107;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9213825	9219425	1000	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_G0000107;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000285;Name=FAM197Y3
HG01258_chrY	CAT	exon	9213825	9213884	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000285:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9213885	9217432	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000285:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9217433	9217591	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000285:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9217592	9219091	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000285:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9219092	9219237	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000285:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9219238	9219323	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000285:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9219324	9219425	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000285;gene_id=HG01258_ch_G0000107;Parent=HG01258_ch_T0000285;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000285:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9222034	9224830	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_186.1;gene_id=HG01258_ch_G0000108;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000108;Name=TSPY10
HG01258_chrY	CAT	transcript	9222034	9224830	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_G0000108;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000286;Name=TSPY10
HG01258_chrY	CAT	exon	9222034	9222565	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9222080	9222565	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9222080	9222082	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000286;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9222566	9223172	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000286:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223173	9223250	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223173	9223250	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223251	9223378	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000286:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223379	9223490	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223379	9223490	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223491	9223591	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000286:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223592	9223737	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223592	9223737	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223738	9223843	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000286:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223844	9223925	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223844	9223925	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223926	9224619	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000286:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9224620	9224830	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000286:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9224620	9224642	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000286:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9224640	9224642	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1;transcript_id=HG01258_ch_T0000286;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000286;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000286;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9222034	9224830	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_G0000108;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000287;Name=TSPY10
HG01258_chrY	CAT	exon	9222034	9222565	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9222080	9222565	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9222080	9222082	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000287;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9222566	9223172	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223173	9223250	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223173	9223250	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223251	9223378	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223379	9223490	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223379	9223490	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223491	9223591	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223592	9223737	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223592	9223737	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223738	9223832	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223833	9223925	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223833	9223895	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9223893	9223895	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000287;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223926	9224619	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9224620	9224830	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2;transcript_id=HG01258_ch_T0000287;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000287;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000287:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9222034	9224830	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_G0000108;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000288;Name=TSPY10
HG01258_chrY	CAT	exon	9222034	9222565	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9222080	9222565	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9222080	9222082	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9222566	9223172	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223173	9223250	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223173	9223250	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223251	9223378	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223379	9223490	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223379	9223490	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223491	9223598	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223599	9223737	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223599	9223737	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223738	9223843	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223844	9223925	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9223844	9223895	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9223893	9223895	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223926	9224619	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9224620	9224830	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3;transcript_id=HG01258_ch_T0000288;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000288;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000288:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9222034	9224830	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_G0000108;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000289;Name=TSPY10
HG01258_chrY	CAT	exon	9222034	9222565	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9222566	9223172	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223173	9223250	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223251	9223378	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223379	9223490	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223491	9223598	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223599	9223737	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223738	9223832	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9223833	9223925	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9223926	9224619	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9224620	9224830	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4;transcript_id=HG01258_ch_T0000289;gene_id=HG01258_ch_G0000108;Parent=HG01258_ch_T0000289;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000289:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9234106	9239799	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;gene_id=HG01258_ch_G0000109;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000109;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9234106	9239799	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_G0000109;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000290;Name=FAM197Y2
HG01258_chrY	CAT	exon	9234106	9234165	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9234166	9237715	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9237716	9237874	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9237875	9239376	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9239377	9239522	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9239523	9239608	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9239609	9239799	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000290;gene_id=HG01258_ch_G0000109;Parent=HG01258_ch_T0000290;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000290:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9242323	9245119	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_188.1;gene_id=HG01258_ch_G0000110;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000110;Name=TSPY10
HG01258_chrY	CAT	transcript	9242323	9245119	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_G0000110;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000291;Name=TSPY10
HG01258_chrY	CAT	exon	9242323	9242854	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9242369	9242854	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9242369	9242371	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9242855	9243461	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243462	9243539	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243462	9243539	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243540	9243667	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243668	9243779	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243668	9243779	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243780	9243880	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243881	9244026	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243881	9244026	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244027	9244132	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244133	9244214	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9244133	9244214	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244215	9244908	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244909	9245119	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9244909	9244931	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9244929	9244931	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.1;transcript_id=HG01258_ch_T0000291;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000291;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9242323	9245119	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_G0000110;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000292;Name=TSPY10
HG01258_chrY	CAT	exon	9242323	9242854	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9242369	9242854	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9242369	9242371	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9242855	9243461	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243462	9243539	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243462	9243539	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243540	9243667	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243668	9243779	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243668	9243779	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243780	9243880	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243881	9244026	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243881	9244026	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244027	9244121	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244122	9244214	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9244122	9244184	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9244182	9244184	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244215	9244908	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244909	9245119	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.2;transcript_id=HG01258_ch_T0000292;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000292;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000292:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9242323	9245119	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_G0000110;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG01258_ch_T0000293;Name=TSPY10
HG01258_chrY	CAT	exon	9242323	9242854	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9242369	9242854	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9242369	9242371	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9242855	9243461	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243462	9243539	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243462	9243539	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243540	9243667	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243668	9243779	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243668	9243779	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243780	9243887	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243888	9244026	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9243888	9244026	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244027	9244132	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244133	9244214	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9244133	9244184	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9244182	9244184	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244215	9244908	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244909	9245119	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.3;transcript_id=HG01258_ch_T0000293;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000293;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9242323	9245119	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_G0000110;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG01258_ch_T0000294;Name=TSPY10
HG01258_chrY	CAT	exon	9242323	9242854	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9242855	9243461	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243462	9243539	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243540	9243667	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243668	9243779	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9243780	9243887	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9243888	9244026	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244027	9244121	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244122	9244214	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9244215	9244908	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9244909	9245119	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_188.4;transcript_id=HG01258_ch_T0000294;gene_id=HG01258_ch_G0000110;Parent=HG01258_ch_T0000294;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9254380	9260062	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_165.1;gene_id=HG01258_ch_G0000111;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000111;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9254380	9260062	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_G0000111;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000295;Name=FAM197Y2
HG01258_chrY	CAT	exon	9254380	9254439	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9254440	9257988	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9257989	9258147	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9258148	9259639	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9259640	9259785	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9259786	9259871	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9259872	9260062	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1;transcript_id=HG01258_ch_T0000295;gene_id=HG01258_ch_G0000111;Parent=HG01258_ch_T0000295;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000295:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9262586	9265400	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_174;alternative_source_transcripts=hg002_chrY_paternal_190.1;gene_id=HG01258_ch_G0000112;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000112;Name=TSPY4
HG01258_chrY	CAT	transcript	9262586	9265400	100	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_G0000112;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000296;Name=TSPY4
HG01258_chrY	CAT	exon	9262586	9263135	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9262632	9263135	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9262632	9262634	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000296;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263136	9263742	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000296:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263743	9263820	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263743	9263820	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263821	9263948	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000296:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263949	9264060	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263949	9264060	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264061	9264161	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000296:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264162	9264307	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264162	9264307	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264308	9264413	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000296:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264414	9264495	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264414	9264495	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264496	9265189	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000296:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9265190	9265400	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000296:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9265190	9265212	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000296:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9265210	9265212	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000296;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000296;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000296;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9262586	9265400	100	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_G0000112;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000297;Name=TSPY4
HG01258_chrY	CAT	exon	9262586	9263135	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9262632	9263135	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9262632	9262634	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263136	9263742	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263743	9263820	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263743	9263820	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263821	9263948	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263949	9264060	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263949	9264060	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264061	9264161	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264162	9264307	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264162	9264307	.	+	2	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264308	9264402	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264403	9264495	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264403	9264465	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9264463	9264465	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264496	9265189	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9265190	9265400	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000297;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000297;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000297:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9262586	9265400	100	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_G0000112;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG01258_ch_T0000298;Name=TSPY4
HG01258_chrY	CAT	exon	9262586	9263135	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9262632	9263135	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9262632	9262634	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263136	9263742	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263743	9263820	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263743	9263820	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263821	9263948	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263949	9264060	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9263949	9264060	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264061	9264168	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264169	9264307	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264169	9264307	.	+	2	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264308	9264413	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264414	9264495	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9264414	9264465	.	+	1	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9264463	9264465	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264496	9265189	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9265190	9265400	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000298;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000298;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000298:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9262586	9265400	1000	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_G0000112;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=HG01258_ch_T0000299;Name=TSPY4
HG01258_chrY	CAT	exon	9262586	9263135	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263136	9263742	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263743	9263820	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9263821	9263948	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9263949	9264060	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264061	9264168	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264169	9264307	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264308	9264402	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9264403	9264495	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9264496	9265189	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9265190	9265400	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000299;gene_id=HG01258_ch_G0000112;Parent=HG01258_ch_T0000299;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000299:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9274693	9280385	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_191.1;gene_id=HG01258_ch_G0000113;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000113;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9274693	9280385	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_G0000113;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000300;Name=FAM197Y2
HG01258_chrY	CAT	exon	9274693	9274752	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000300:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9274753	9278301	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000300:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9278302	9278460	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000300:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9278461	9279962	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000300:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9279963	9280108	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000300:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9280109	9280194	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000300:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9280195	9280385	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1;transcript_id=HG01258_ch_T0000300;gene_id=HG01258_ch_G0000113;Parent=HG01258_ch_T0000300;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000300:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9282909	9285705	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_176;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;gene_id=HG01258_ch_G0000114;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG01258_ch_G0000114;Name=TSPY3
HG01258_chrY	CAT	transcript	9282909	9285705	100	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_G0000114;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=HG01258_ch_T0000301;Name=TSPY3
HG01258_chrY	CAT	exon	9282909	9283440	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9282955	9283440	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9282955	9282957	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000301;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9283441	9284047	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000301:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284048	9284125	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284048	9284125	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284126	9284253	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000301:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284254	9284365	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284254	9284365	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284366	9284466	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000301:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284467	9284612	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284467	9284612	.	+	2	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284613	9284718	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000301:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284719	9284800	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284719	9284800	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284801	9285494	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000301:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9285495	9285705	.	+	.	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000301:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9285495	9285517	.	+	2	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000301:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9285515	9285517	.	+	0	source_transcript=hg002_chrY_paternal_176.1;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_190.1;transcript_id=HG01258_ch_T0000301;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000301;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000301;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9282909	9285705	100	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_G0000114;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=HG01258_ch_T0000302;Name=TSPY3
HG01258_chrY	CAT	exon	9282909	9283440	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9282955	9283440	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9282955	9282957	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000302;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9283441	9284047	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284048	9284125	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284048	9284125	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284126	9284253	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284254	9284365	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284254	9284365	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284366	9284466	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284467	9284612	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284467	9284612	.	+	2	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284613	9284707	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284708	9284800	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284708	9284770	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9284768	9284770	.	+	0	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000302;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284801	9285494	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9285495	9285705	.	+	.	source_transcript=hg002_chrY_paternal_176.2;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_190.2;transcript_id=HG01258_ch_T0000302;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000302;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000302:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9282909	9285705	100	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_G0000114;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=HG01258_ch_T0000303;Name=TSPY3
HG01258_chrY	CAT	exon	9282909	9283440	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9282955	9283440	.	+	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9282955	9282957	.	+	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000303;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9283441	9284047	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284048	9284125	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284048	9284125	.	+	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284126	9284253	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284254	9284365	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284254	9284365	.	+	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284366	9284473	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284474	9284612	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284474	9284612	.	+	2	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284613	9284718	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284719	9284800	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9284719	9284770	.	+	1	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9284768	9284770	.	+	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000303;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284801	9285494	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9285495	9285705	.	+	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_190.3;transcript_id=HG01258_ch_T0000303;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000303;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000303:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9282909	9285705	1000	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_G0000114;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=HG01258_ch_T0000304;Name=TSPY3
HG01258_chrY	CAT	exon	9282909	9283440	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9283441	9284047	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000304:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284048	9284125	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284126	9284253	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000304:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284254	9284365	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284366	9284473	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000304:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284474	9284612	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284613	9284707	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000304:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9284708	9284800	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9284801	9285494	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000304:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9285495	9285705	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.1;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_190.4;transcript_id=HG01258_ch_T0000304;gene_id=HG01258_ch_G0000114;Parent=HG01258_ch_T0000304;transcript_name=hg002_chrY_paternal_176.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000304:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9294969	9300574	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;gene_id=HG01258_ch_G0000115;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000115;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9294969	9300574	1000	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_G0000115;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000305;Name=FAM197Y3
HG01258_chrY	CAT	exon	9294969	9295028	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000305:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9295029	9298579	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000305:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9298580	9298738	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000305:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9298739	9300240	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000305:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9300241	9300386	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000305:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9300387	9300472	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000305:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9300473	9300574	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000305;gene_id=HG01258_ch_G0000115;Parent=HG01258_ch_T0000305;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000305:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9303187	9305983	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_194.1;gene_id=HG01258_ch_G0000116;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000116;Name=TSPY10
HG01258_chrY	CAT	transcript	9303187	9305983	100	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_G0000116;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG01258_ch_T0000306;Name=TSPY10
HG01258_chrY	CAT	exon	9303187	9303718	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9303233	9303718	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9303233	9303235	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000306;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9303719	9304325	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304326	9304403	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304326	9304403	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304404	9304531	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304532	9304643	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304532	9304643	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304644	9304744	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304745	9304890	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304745	9304890	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304891	9304996	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304997	9305078	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304997	9305078	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9305079	9305772	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9305773	9305983	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000306:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9305773	9305795	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000306:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9305793	9305795	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1;transcript_id=HG01258_ch_T0000306;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000306;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000306;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9303187	9305983	100	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_G0000116;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG01258_ch_T0000307;Name=TSPY10
HG01258_chrY	CAT	exon	9303187	9303718	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9303233	9303718	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9303233	9303235	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9303719	9304325	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304326	9304403	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304326	9304403	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304404	9304531	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304532	9304643	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304532	9304643	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304644	9304744	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304745	9304890	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304745	9304890	.	+	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304891	9304985	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304986	9305078	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304986	9305048	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9305046	9305048	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9305079	9305772	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9305773	9305983	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2;transcript_id=HG01258_ch_T0000307;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000307;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000307:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9303187	9305983	100	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_G0000116;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG01258_ch_T0000308;Name=TSPY10
HG01258_chrY	CAT	exon	9303187	9303718	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9303233	9303718	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9303233	9303235	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9303719	9304325	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304326	9304403	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304326	9304403	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304404	9304531	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304532	9304643	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304532	9304643	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304644	9304751	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304752	9304890	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304752	9304890	.	+	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304891	9304996	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304997	9305078	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9304997	9305048	.	+	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9305046	9305048	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9305079	9305772	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9305773	9305983	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG01258_ch_T0000308;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000308;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000308:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9303187	9305983	1000	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_G0000116;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=HG01258_ch_T0000309;Name=TSPY10
HG01258_chrY	CAT	exon	9303187	9303718	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9303719	9304325	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304326	9304403	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304404	9304531	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304532	9304643	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304644	9304751	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304752	9304890	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9304891	9304985	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9304986	9305078	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9305079	9305772	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9305773	9305983	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG01258_ch_T0000309;gene_id=HG01258_ch_G0000116;Parent=HG01258_ch_T0000309;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000309:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9315255	9320855	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_179;gene_id=HG01258_ch_G0000117;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000117;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9315255	9320855	1000	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_G0000117;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000310;Name=FAM197Y3
HG01258_chrY	CAT	exon	9315255	9315314	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000310:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9315315	9318862	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000310:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9318863	9319021	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000310:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9319022	9320521	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000310:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9320522	9320667	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000310:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9320668	9320753	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000310:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9320754	9320855	.	-	.	source_transcript=hg002_chrY_paternal_179.1;source_transcript_name=hg002_chrY_paternal_179.1;source_gene=hg002_chrY_paternal_179;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_179;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_179.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000310;gene_id=HG01258_ch_G0000117;Parent=HG01258_ch_T0000310;transcript_name=hg002_chrY_paternal_179.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000310:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9323464	9326260	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;gene_id=HG01258_ch_G0000118;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG01258_ch_G0000118;Name=TSPY1
HG01258_chrY	CAT	transcript	9323464	9326260	9980	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_G0000118;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01258_ch_T0000311;Name=TSPY1
HG01258_chrY	CAT	exon	9323464	9323596	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9323510	9323596	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9323510	9323512	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000311;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9323597	9323857	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9323858	9323995	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9323858	9323995	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9323996	9324602	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9324603	9324680	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9324603	9324680	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9324681	9324808	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9324809	9324920	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9324809	9324920	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9324921	9325021	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9325022	9325167	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9325022	9325167	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9325168	9325273	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9325274	9325355	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9325274	9325355	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9325356	9326049	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000311:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9326050	9326260	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000311:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9326050	9326072	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000311:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9326070	9326072	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000311;gene_id=HG01258_ch_G0000118;Parent=HG01258_ch_T0000311;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000311;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9335538	9341138	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_197.1;gene_id=HG01258_ch_G0000119;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000119;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9335538	9341138	1000	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_G0000119;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000312;Name=FAM197Y3
HG01258_chrY	CAT	exon	9335538	9335597	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000312:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9335598	9339145	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000312:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9339146	9339304	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000312:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9339305	9340804	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000312:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9340805	9340950	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000312:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9340951	9341036	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000312:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9341037	9341138	.	-	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG01258_ch_T0000312;gene_id=HG01258_ch_G0000119;Parent=HG01258_ch_T0000312;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000312:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9343747	9346543	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;gene_id=HG01258_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG01258_ch_G0000120;Name=TSPY1
HG01258_chrY	CAT	transcript	9343747	9346543	10000	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_G0000120;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01258_ch_T0000313;Name=TSPY1
HG01258_chrY	CAT	exon	9343747	9343879	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9343793	9343879	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9343793	9343795	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000313;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9343880	9344140	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9344141	9344278	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9344141	9344278	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9344279	9344885	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9344886	9344963	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9344886	9344963	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9344964	9345091	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9345092	9345203	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9345092	9345203	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9345204	9345304	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9345305	9345450	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9345305	9345450	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9345451	9345556	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9345557	9345638	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9345557	9345638	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9345639	9346332	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000313:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9346333	9346543	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000313:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9346333	9346355	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000313:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9346353	9346355	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000313;gene_id=HG01258_ch_G0000120;Parent=HG01258_ch_T0000313;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000313;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9355819	9361512	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_181;gene_id=HG01258_ch_G0000121;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000121;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9355819	9361512	1000	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_G0000121;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000314;Name=FAM197Y2
HG01258_chrY	CAT	exon	9355819	9355878	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000314:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9355879	9359428	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000314:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9359429	9359587	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000314:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9359588	9361089	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000314:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9361090	9361235	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000314:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9361236	9361321	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000314:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9361322	9361512	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000314;gene_id=HG01258_ch_G0000121;Parent=HG01258_ch_T0000314;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000314:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9364036	9366832	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_200.1;gene_id=HG01258_ch_G0000122;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000122;Name=TSPY10
HG01258_chrY	CAT	transcript	9364036	9366832	100	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_G0000122;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG01258_ch_T0000315;Name=TSPY10
HG01258_chrY	CAT	exon	9364036	9364567	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9364082	9364567	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9364082	9364084	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000315;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9364568	9365174	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000315:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365175	9365252	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365175	9365252	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365253	9365380	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000315:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365381	9365492	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365381	9365492	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365493	9365593	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000315:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365594	9365739	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365594	9365739	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365740	9365845	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000315:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365846	9365927	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365846	9365927	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365928	9366621	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000315:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9366622	9366832	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000315:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9366622	9366644	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000315:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9366642	9366644	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000315;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000315;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000315;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9364036	9366832	100	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_G0000122;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG01258_ch_T0000316;Name=TSPY10
HG01258_chrY	CAT	exon	9364036	9364567	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9364082	9364567	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9364082	9364084	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000316;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9364568	9365174	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000316:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365175	9365252	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365175	9365252	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365253	9365380	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000316:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365381	9365492	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365381	9365492	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365493	9365593	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000316:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365594	9365739	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365594	9365739	.	+	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365740	9365834	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000316:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365835	9365927	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365835	9365897	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9365895	9365897	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000316;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365928	9366621	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000316:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9366622	9366832	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000316;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000316;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000316:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9364036	9366832	100	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_G0000122;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG01258_ch_T0000317;Name=TSPY10
HG01258_chrY	CAT	exon	9364036	9364567	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9364082	9364567	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000317:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9364082	9364084	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000317;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9364568	9365174	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000317:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365175	9365252	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365175	9365252	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000317:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365253	9365380	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000317:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365381	9365492	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365381	9365492	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000317:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365493	9365600	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000317:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365601	9365739	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365601	9365739	.	+	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000317:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365740	9365845	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000317:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365846	9365927	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9365846	9365897	.	+	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000317:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9365895	9365897	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000317;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365928	9366621	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000317:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9366622	9366832	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000317;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000317;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000317:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9364036	9366832	1000	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_G0000122;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=HG01258_ch_T0000318;Name=TSPY10
HG01258_chrY	CAT	exon	9364036	9364567	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9364568	9365174	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000318:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365175	9365252	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365253	9365380	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000318:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365381	9365492	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365493	9365600	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000318:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365601	9365739	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365740	9365834	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000318:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9365835	9365927	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9365928	9366621	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000318:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9366622	9366832	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000318;gene_id=HG01258_ch_G0000122;Parent=HG01258_ch_T0000318;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000318:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9376093	9381775	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_183;gene_id=HG01258_ch_G0000123;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000123;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9376093	9381775	1000	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_G0000123;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000319;Name=FAM197Y2
HG01258_chrY	CAT	exon	9376093	9376152	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000319:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9376153	9379701	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000319:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9379702	9379860	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000319:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9379861	9381352	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000319:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9381353	9381498	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000319:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9381499	9381584	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000319:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9381585	9381775	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000319;gene_id=HG01258_ch_G0000123;Parent=HG01258_ch_T0000319;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000319:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9384299	9387113	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;gene_id=HG01258_ch_G0000124;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000124;Name=TSPY4
HG01258_chrY	CAT	transcript	9384299	9387113	100	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_G0000124;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01258_ch_T0000320;Name=TSPY4
HG01258_chrY	CAT	exon	9384299	9384848	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9384345	9384848	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9384345	9384347	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000320;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9384849	9385455	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000320:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385456	9385533	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385456	9385533	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385534	9385661	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000320:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385662	9385773	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385662	9385773	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385774	9385874	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000320:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385875	9386020	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385875	9386020	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386021	9386126	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000320:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386127	9386208	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9386127	9386208	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386209	9386902	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000320:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386903	9387113	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000320:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9386903	9386925	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000320:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9386923	9386925	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.1,hg002_chrY_paternal_178.1;transcript_id=HG01258_ch_T0000320;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000320;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000320;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9384299	9387113	100	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_G0000124;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01258_ch_T0000321;Name=TSPY4
HG01258_chrY	CAT	exon	9384299	9384848	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9384345	9384848	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000321:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9384345	9384347	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000321;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9384849	9385455	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000321:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385456	9385533	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385456	9385533	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000321:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385534	9385661	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000321:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385662	9385773	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385662	9385773	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000321:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385774	9385874	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000321:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385875	9386020	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385875	9386020	.	+	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000321:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386021	9386115	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000321:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386116	9386208	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9386116	9386178	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000321:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9386176	9386178	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000321;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386209	9386902	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000321:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386903	9387113	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_202.2,hg002_chrY_paternal_178.2;transcript_id=HG01258_ch_T0000321;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000321;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000321:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9384299	9387113	100	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_G0000124;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG01258_ch_T0000322;Name=TSPY4
HG01258_chrY	CAT	exon	9384299	9384848	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9384345	9384848	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000322:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9384345	9384347	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000322;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9384849	9385455	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000322:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385456	9385533	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385456	9385533	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000322:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385534	9385661	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000322:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385662	9385773	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385662	9385773	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000322:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385774	9385881	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000322:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385882	9386020	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9385882	9386020	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000322:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386021	9386126	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000322:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386127	9386208	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9386127	9386178	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000322:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9386176	9386178	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000322;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386209	9386902	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000322:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386903	9387113	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.3;transcript_id=HG01258_ch_T0000322;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000322;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000322:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9384299	9387113	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_G0000124;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG01258_ch_T0000323;Name=TSPY4
HG01258_chrY	CAT	exon	9384299	9384848	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9384849	9385455	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000323:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385456	9385533	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385534	9385661	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000323:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385662	9385773	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9385774	9385881	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000323:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9385882	9386020	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386021	9386115	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000323:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386116	9386208	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9386209	9386902	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000323:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9386903	9387113	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_178.4;transcript_id=HG01258_ch_T0000323;gene_id=HG01258_ch_G0000124;Parent=HG01258_ch_T0000323;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000323:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9396406	9402098	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_185;gene_id=HG01258_ch_G0000125;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000125;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9396406	9402098	1000	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_G0000125;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000324;Name=FAM197Y2
HG01258_chrY	CAT	exon	9396406	9396465	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000324:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9396466	9400014	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000324:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9400015	9400173	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000324:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9400174	9401675	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000324:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9401676	9401821	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000324:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9401822	9401907	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000324:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9401908	9402098	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000324;gene_id=HG01258_ch_G0000125;Parent=HG01258_ch_T0000324;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000324:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9404622	9407418	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_188;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;gene_id=HG01258_ch_G0000126;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG01258_ch_G0000126;Name=TSPY3
HG01258_chrY	CAT	transcript	9404622	9407418	100	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_G0000126;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG01258_ch_T0000325;Name=TSPY3
HG01258_chrY	CAT	exon	9404622	9405153	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9404668	9405153	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9404668	9404670	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000325;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405154	9405760	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000325:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405761	9405838	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405761	9405838	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405839	9405966	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000325:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405967	9406078	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405967	9406078	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406079	9406179	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000325:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406180	9406325	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406180	9406325	.	+	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406326	9406431	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000325:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406432	9406513	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406432	9406513	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406514	9407207	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000325:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9407208	9407418	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000325:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9407208	9407230	.	+	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000325:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9407228	9407230	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_180.1;transcript_id=HG01258_ch_T0000325;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000325;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000325;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9404622	9407418	100	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_G0000126;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG01258_ch_T0000326;Name=TSPY3
HG01258_chrY	CAT	exon	9404622	9405153	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9404668	9405153	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9404668	9404670	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000326;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405154	9405760	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405761	9405838	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405761	9405838	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405839	9405966	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405967	9406078	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405967	9406078	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406079	9406179	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406180	9406325	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406180	9406325	.	+	2	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406326	9406420	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406421	9406513	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406421	9406483	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9406481	9406483	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000326;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406514	9407207	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9407208	9407418	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_180.2;transcript_id=HG01258_ch_T0000326;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000326:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9404622	9407418	100	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_G0000126;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG01258_ch_T0000327;Name=TSPY3
HG01258_chrY	CAT	exon	9404622	9405153	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9404668	9405153	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9404668	9404670	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000327;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405154	9405760	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405761	9405838	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405761	9405838	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405839	9405966	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405967	9406078	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9405967	9406078	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406079	9406186	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406187	9406325	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406187	9406325	.	+	2	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406326	9406431	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406432	9406513	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9406432	9406483	.	+	1	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9406481	9406483	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000327;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406514	9407207	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9407208	9407418	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_180.3;transcript_id=HG01258_ch_T0000327;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000327:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9404622	9407418	1000	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_G0000126;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=HG01258_ch_T0000328;Name=TSPY3
HG01258_chrY	CAT	exon	9404622	9405153	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405154	9405760	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000328:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405761	9405838	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9405839	9405966	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000328:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9405967	9406078	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406079	9406186	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000328:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406187	9406325	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406326	9406420	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000328:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9406421	9406513	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9406514	9407207	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000328:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9407208	9407418	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_180.4;transcript_id=HG01258_ch_T0000328;gene_id=HG01258_ch_G0000126;Parent=HG01258_ch_T0000328;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000328:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9416682	9422287	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_205.1;gene_id=HG01258_ch_G0000127;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000127;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9416682	9422287	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_G0000127;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000329;Name=FAM197Y3
HG01258_chrY	CAT	exon	9416682	9416741	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000329:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9416742	9420292	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000329:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9420293	9420451	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000329:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9420452	9421953	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000329:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9421954	9422099	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000329:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9422100	9422185	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000329:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9422186	9422287	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000329;gene_id=HG01258_ch_G0000127;Parent=HG01258_ch_T0000329;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000329:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9424900	9427696	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_204;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;gene_id=HG01258_ch_G0000128;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000128;Name=TSPY3
HG01258_chrY	CAT	transcript	9424900	9427696	100	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_G0000128;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG01258_ch_T0000330;Name=TSPY3
HG01258_chrY	CAT	exon	9424900	9425431	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9424946	9425431	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9424946	9424948	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000330;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9425432	9426038	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000330:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426039	9426116	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426039	9426116	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426117	9426244	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000330:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426245	9426356	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426245	9426356	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426357	9426457	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000330:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426458	9426603	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426458	9426603	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426604	9426709	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000330:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426710	9426791	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426710	9426791	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426792	9427485	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000330:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9427486	9427696	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000330:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9427486	9427508	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000330:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9427506	9427508	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_182.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000330;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000330;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000330;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9424900	9427696	100	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_G0000128;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG01258_ch_T0000331;Name=TSPY3
HG01258_chrY	CAT	exon	9424900	9425431	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9424946	9425431	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000331:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9424946	9424948	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000331;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9425432	9426038	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000331:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426039	9426116	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426039	9426116	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000331:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426117	9426244	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000331:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426245	9426356	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426245	9426356	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000331:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426357	9426457	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000331:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426458	9426603	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426458	9426603	.	+	2	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000331:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426604	9426698	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000331:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426699	9426791	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426699	9426761	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000331:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9426759	9426761	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000331;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426792	9427485	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000331:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9427486	9427696	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_182.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000331;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000331;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000331:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9424900	9427696	100	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_G0000128;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG01258_ch_T0000332;Name=TSPY3
HG01258_chrY	CAT	exon	9424900	9425431	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9424946	9425431	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000332:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9424946	9424948	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:HG01258_ch_T0000332;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9425432	9426038	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000332:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426039	9426116	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426039	9426116	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000332:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426117	9426244	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000332:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426245	9426356	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426245	9426356	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000332:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426357	9426464	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000332:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426465	9426603	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426465	9426603	.	+	2	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000332:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426604	9426709	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000332:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426710	9426791	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9426710	9426761	.	+	1	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:HG01258_ch_T0000332:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9426759	9426761	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:HG01258_ch_T0000332;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426792	9427485	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG01258_ch_T0000332:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9427486	9427696	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_182.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000332;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000332;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG01258_ch_T0000332:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9424900	9427696	1000	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_G0000128;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=HG01258_ch_T0000333;Name=TSPY3
HG01258_chrY	CAT	exon	9424900	9425431	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9425432	9426038	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000333:0;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426039	9426116	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426117	9426244	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000333:1;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426245	9426356	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426357	9426464	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000333:2;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426465	9426603	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426604	9426698	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000333:3;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9426699	9426791	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9426792	9427485	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:HG01258_ch_T0000333:4;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9427486	9427696	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_182.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000333;gene_id=HG01258_ch_G0000128;Parent=HG01258_ch_T0000333;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:HG01258_ch_T0000333:5;Name=TSPY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9436968	9442568	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;gene_id=HG01258_ch_G0000129;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000129;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9436968	9442568	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_G0000129;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000334;Name=FAM197Y3
HG01258_chrY	CAT	exon	9436968	9437027	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000334:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9437028	9440575	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000334:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9440576	9440734	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000334:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9440735	9442234	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000334:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9442235	9442380	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000334:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9442381	9442466	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000334:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9442467	9442568	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000334;gene_id=HG01258_ch_G0000129;Parent=HG01258_ch_T0000334;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000334:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9445177	9447973	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_190;alternative_source_transcripts=hg002_chrY_paternal_208.1;gene_id=HG01258_ch_G0000130;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000130;Name=TSPY10
HG01258_chrY	CAT	transcript	9445177	9447973	100	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_G0000130;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG01258_ch_T0000335;Name=TSPY10
HG01258_chrY	CAT	exon	9445177	9445708	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9445223	9445708	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9445223	9445225	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000335;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9445709	9446315	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000335:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446316	9446393	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446316	9446393	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446394	9446521	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000335:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446522	9446633	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446522	9446633	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446634	9446734	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000335:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446735	9446880	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446735	9446880	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446881	9446986	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000335:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446987	9447068	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446987	9447068	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9447069	9447762	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000335:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9447763	9447973	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000335:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9447763	9447785	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000335:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9447783	9447785	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.1;transcript_id=HG01258_ch_T0000335;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000335;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000335;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9445177	9447973	100	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_G0000130;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG01258_ch_T0000336;Name=TSPY10
HG01258_chrY	CAT	exon	9445177	9445708	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9445223	9445708	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000336:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9445223	9445225	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000336;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9445709	9446315	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000336:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446316	9446393	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446316	9446393	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000336:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446394	9446521	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000336:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446522	9446633	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446522	9446633	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000336:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446634	9446734	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000336:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446735	9446880	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446735	9446880	.	+	2	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000336:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446881	9446975	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000336:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446976	9447068	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446976	9447038	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000336:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9447036	9447038	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000336;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9447069	9447762	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000336:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9447763	9447973	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.2;transcript_id=HG01258_ch_T0000336;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000336;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000336:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9445177	9447973	100	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_G0000130;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG01258_ch_T0000337;Name=TSPY10
HG01258_chrY	CAT	exon	9445177	9445708	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9445223	9445708	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000337:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9445223	9445225	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000337;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9445709	9446315	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000337:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446316	9446393	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446316	9446393	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000337:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446394	9446521	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000337:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446522	9446633	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446522	9446633	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000337:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446634	9446741	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000337:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446742	9446880	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446742	9446880	.	+	2	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000337:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446881	9446986	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000337:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446987	9447068	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9446987	9447038	.	+	1	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000337:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9447036	9447038	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000337;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9447069	9447762	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000337:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9447763	9447973	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.3;transcript_id=HG01258_ch_T0000337;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000337;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000337:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9445177	9447973	1000	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_G0000130;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=HG01258_ch_T0000338;Name=TSPY10
HG01258_chrY	CAT	exon	9445177	9445708	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9445709	9446315	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000338:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446316	9446393	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446394	9446521	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000338:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446522	9446633	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446634	9446741	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000338:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446742	9446880	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9446881	9446975	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000338:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9446976	9447068	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9447069	9447762	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000338:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9447763	9447973	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4;transcript_id=HG01258_ch_T0000338;gene_id=HG01258_ch_G0000130;Parent=HG01258_ch_T0000338;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000338:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9457249	9462942	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_191;alternative_source_transcripts=hg002_chrY_paternal_209.1;gene_id=HG01258_ch_G0000131;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000131;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9457249	9462942	1000	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_G0000131;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000339;Name=FAM197Y2
HG01258_chrY	CAT	exon	9457249	9457308	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000339:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9457309	9460858	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000339:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9460859	9461017	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000339:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9461018	9462519	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000339:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9462520	9462665	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000339:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9462666	9462751	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000339:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9462752	9462942	.	-	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=HG01258_ch_T0000339;gene_id=HG01258_ch_G0000131;Parent=HG01258_ch_T0000339;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000339:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9465466	9468262	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_192;alternative_source_transcripts=hg002_chrY_paternal_210.1;gene_id=HG01258_ch_G0000132;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000132;Name=TSPY10
HG01258_chrY	CAT	transcript	9465466	9468262	100	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_G0000132;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01258_ch_T0000340;Name=TSPY10
HG01258_chrY	CAT	exon	9465466	9465997	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9465512	9465997	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9465512	9465514	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000340;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9465998	9466604	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000340:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466605	9466682	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466605	9466682	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466683	9466810	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000340:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466811	9466922	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466811	9466922	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466923	9467023	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000340:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467024	9467169	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467024	9467169	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467170	9467275	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000340:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467276	9467357	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467276	9467357	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467358	9468051	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000340:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9468052	9468262	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000340:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9468052	9468074	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000340:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9468072	9468074	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.1;transcript_id=HG01258_ch_T0000340;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000340;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000340;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9465466	9468262	100	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_G0000132;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01258_ch_T0000341;Name=TSPY10
HG01258_chrY	CAT	exon	9465466	9465997	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9465512	9465997	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9465512	9465514	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000341;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9465998	9466604	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000341:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466605	9466682	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466605	9466682	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466683	9466810	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000341:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466811	9466922	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466811	9466922	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466923	9467023	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000341:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467024	9467169	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467024	9467169	.	+	2	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467170	9467264	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000341:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467265	9467357	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467265	9467327	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9467325	9467327	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000341;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467358	9468051	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000341:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9468052	9468262	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_210.2;transcript_id=HG01258_ch_T0000341;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000341;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000341:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9465466	9468262	100	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_G0000132;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG01258_ch_T0000342;Name=TSPY10
HG01258_chrY	CAT	exon	9465466	9465997	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9465512	9465997	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000342:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9465512	9465514	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000342;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9465998	9466604	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000342:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466605	9466682	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466605	9466682	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000342:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466683	9466810	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000342:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466811	9466922	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9466811	9466922	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000342:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466923	9467030	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000342:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467031	9467169	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467031	9467169	.	+	2	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000342:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467170	9467275	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000342:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467276	9467357	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9467276	9467327	.	+	1	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000342:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9467325	9467327	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000342;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467358	9468051	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000342:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9468052	9468262	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000342;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000342;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000342:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9465466	9468262	1000	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_G0000132;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=HG01258_ch_T0000343;Name=TSPY10
HG01258_chrY	CAT	exon	9465466	9465997	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9465998	9466604	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000343:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466605	9466682	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466683	9466810	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000343:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9466811	9466922	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9466923	9467030	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000343:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467031	9467169	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467170	9467264	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000343:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9467265	9467357	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9467358	9468051	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000343:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9468052	9468262	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000343;gene_id=HG01258_ch_G0000132;Parent=HG01258_ch_T0000343;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000343:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9477523	9483205	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;gene_id=HG01258_ch_G0000133;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000133;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9477523	9483205	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_G0000133;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000344;Name=FAM197Y2
HG01258_chrY	CAT	exon	9477523	9477582	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000344:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9477583	9481131	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000344:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9481132	9481290	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000344:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9481291	9482782	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000344:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9482783	9482928	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000344:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9482929	9483014	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000344:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9483015	9483205	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000344;gene_id=HG01258_ch_G0000133;Parent=HG01258_ch_T0000344;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000344:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9485729	9488543	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_212.1;gene_id=HG01258_ch_G0000134;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000134;Name=TSPY4
HG01258_chrY	CAT	transcript	9485729	9488543	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_G0000134;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01258_ch_T0000345;Name=TSPY4
HG01258_chrY	CAT	exon	9485729	9486278	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9485775	9486278	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9485775	9485777	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000345;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486279	9486885	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9486886	9486963	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9486886	9486963	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486964	9487091	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487092	9487203	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487092	9487203	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487204	9487304	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487305	9487450	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487305	9487450	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487451	9487556	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487557	9487638	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487557	9487638	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487639	9488332	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9488333	9488543	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000345:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9488333	9488355	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000345:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9488353	9488355	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000345;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000345;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000345;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9485729	9488543	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_G0000134;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01258_ch_T0000346;Name=TSPY4
HG01258_chrY	CAT	exon	9485729	9486278	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9485775	9486278	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000346:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9485775	9485777	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000346;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486279	9486885	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000346:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9486886	9486963	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9486886	9486963	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000346:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486964	9487091	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000346:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487092	9487203	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487092	9487203	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000346:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487204	9487304	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000346:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487305	9487450	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487305	9487450	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000346:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487451	9487545	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000346:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487546	9487638	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487546	9487608	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000346:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9487606	9487608	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000346;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487639	9488332	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000346:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9488333	9488543	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000346;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000346;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000346:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9485729	9488543	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_G0000134;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG01258_ch_T0000347;Name=TSPY4
HG01258_chrY	CAT	exon	9485729	9486278	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9485775	9486278	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9485775	9485777	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000347;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486279	9486885	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9486886	9486963	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9486886	9486963	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486964	9487091	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487092	9487203	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487092	9487203	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487204	9487311	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487312	9487450	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487312	9487450	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487451	9487556	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487557	9487638	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9487557	9487608	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9487606	9487608	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000347;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487639	9488332	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9488333	9488543	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000347;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000347;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000347:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9485729	9488543	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_G0000134;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=HG01258_ch_T0000348;Name=TSPY4
HG01258_chrY	CAT	exon	9485729	9486278	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486279	9486885	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9486886	9486963	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9486964	9487091	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487092	9487203	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487204	9487311	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487312	9487450	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487451	9487545	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9487546	9487638	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9487639	9488332	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9488333	9488543	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000348;gene_id=HG01258_ch_G0000134;Parent=HG01258_ch_T0000348;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000348:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9497836	9503531	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_213.1;gene_id=HG01258_ch_G0000135;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000135;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9497836	9503531	1000	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_G0000135;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000349;Name=FAM197Y2
HG01258_chrY	CAT	exon	9497836	9497895	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000349:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9497896	9501449	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000349:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9501450	9501608	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000349:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9501609	9503108	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000349:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9503109	9503254	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000349:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9503255	9503340	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000349:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9503341	9503531	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=HG01258_ch_T0000349;gene_id=HG01258_ch_G0000135;Parent=HG01258_ch_T0000349;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000349:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9506055	9508851	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;gene_id=HG01258_ch_G0000136;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000136;Name=TSPY1
HG01258_chrY	CAT	transcript	9506055	9508851	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_G0000136;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01258_ch_T0000350;Name=TSPY1
HG01258_chrY	CAT	exon	9506055	9506586	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9506101	9506586	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9506101	9506103	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000350;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506587	9507193	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507194	9507271	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507194	9507271	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507272	9507399	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507400	9507511	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507400	9507511	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507512	9507612	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507613	9507758	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507613	9507758	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507759	9507853	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507854	9507946	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507854	9507916	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9507914	9507916	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000350;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507947	9508640	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9508641	9508851	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.1,hg002_chrY_paternal_212.2;transcript_id=HG01258_ch_T0000350;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000350;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000350:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9506055	9508851	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_G0000136;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01258_ch_T0000351;Name=TSPY1
HG01258_chrY	CAT	exon	9506055	9506187	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9506101	9506187	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9506101	9506103	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000351;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506188	9506448	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9506449	9506586	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9506449	9506586	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506587	9507193	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507194	9507271	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507194	9507271	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507272	9507399	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507400	9507511	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507400	9507511	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507512	9507612	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507613	9507758	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507613	9507758	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507759	9507864	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507865	9507946	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507865	9507946	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507947	9508640	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9508641	9508851	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000351:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9508641	9508663	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000351:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9508661	9508663	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;transcript_id=HG01258_ch_T0000351;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000351;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000351;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9506055	9508851	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_G0000136;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01258_ch_T0000352;Name=TSPY1
HG01258_chrY	CAT	exon	9506055	9506586	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9506101	9506586	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9506101	9506103	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000352;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506587	9507193	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507194	9507271	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507194	9507271	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507272	9507399	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507400	9507511	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507400	9507511	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507512	9507612	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507613	9507758	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507613	9507758	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507759	9507864	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507865	9507946	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507865	9507946	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507947	9508640	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9508641	9508851	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000352:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9508641	9508663	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000352:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9508661	9508663	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.3,hg002_chrY_paternal_212.1;transcript_id=HG01258_ch_T0000352;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000352;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000352;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9506055	9508851	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_G0000136;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG01258_ch_T0000353;Name=TSPY1
HG01258_chrY	CAT	exon	9506055	9506586	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9506101	9506586	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9506101	9506103	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000353;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506587	9507193	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507194	9507271	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507194	9507271	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507272	9507399	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507400	9507511	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507400	9507511	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507512	9507619	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507620	9507758	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507620	9507758	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507759	9507864	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507865	9507946	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9507865	9507916	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9507914	9507916	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000353;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507947	9508640	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9508641	9508851	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.4,hg002_chrY_paternal_212.3;transcript_id=HG01258_ch_T0000353;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000353;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000353:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9506055	9508851	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_G0000136;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG01258_ch_T0000354;Name=TSPY1
HG01258_chrY	CAT	exon	9506055	9506586	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9506587	9507193	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000354:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507194	9507271	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507272	9507399	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000354:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507400	9507511	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507512	9507619	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000354:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507620	9507758	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507759	9507853	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000354:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9507854	9507946	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9507947	9508640	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000354:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9508641	9508851	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.5,hg002_chrY_paternal_212.4;transcript_id=HG01258_ch_T0000354;gene_id=HG01258_ch_G0000136;Parent=HG01258_ch_T0000354;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000354:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9518129	9523732	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;gene_id=HG01258_ch_G0000137;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000137;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9518129	9523732	1000	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_G0000137;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000355;Name=FAM197Y3
HG01258_chrY	CAT	exon	9518129	9518188	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000355:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9518189	9521739	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000355:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9521740	9521898	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000355:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9521899	9523398	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000355:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9523399	9523544	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000355:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9523545	9523630	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000355:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9523631	9523732	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000355;gene_id=HG01258_ch_G0000137;Parent=HG01258_ch_T0000355;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000355:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9526345	9529141	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;gene_id=HG01258_ch_G0000138;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000138;Name=TSPY1
HG01258_chrY	CAT	transcript	9526345	9529141	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_G0000138;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01258_ch_T0000356;Name=TSPY1
HG01258_chrY	CAT	exon	9526345	9526876	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9526391	9526876	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9526391	9526393	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000356;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526877	9527483	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000356:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527484	9527561	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527484	9527561	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527562	9527689	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000356:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527690	9527801	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527690	9527801	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527802	9527902	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000356:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527903	9528048	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527903	9528048	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528049	9528154	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000356:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528155	9528236	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528155	9528236	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528237	9528930	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000356:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528931	9529141	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000356:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528931	9528953	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000356:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9528951	9528953	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_214.3;transcript_id=HG01258_ch_T0000356;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000356;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000356;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9526345	9529141	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_G0000138;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01258_ch_T0000357;Name=TSPY1
HG01258_chrY	CAT	exon	9526345	9526876	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9526391	9526876	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9526391	9526393	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000357;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526877	9527483	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527484	9527561	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527484	9527561	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527562	9527689	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527690	9527801	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527690	9527801	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527802	9527902	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527903	9528048	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527903	9528048	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528049	9528143	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528144	9528236	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528144	9528206	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9528204	9528206	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000357;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528237	9528930	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528931	9529141	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_214.1;transcript_id=HG01258_ch_T0000357;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000357;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000357:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9526345	9529141	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_G0000138;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01258_ch_T0000358;Name=TSPY1
HG01258_chrY	CAT	exon	9526345	9526876	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9526391	9526876	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9526391	9526393	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526877	9527483	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527484	9527561	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527484	9527561	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527562	9527689	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527690	9527801	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527690	9527801	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527802	9527909	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527910	9528048	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527910	9528048	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528049	9528154	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528155	9528236	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528155	9528206	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9528204	9528206	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528237	9528930	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528931	9529141	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_214.4;transcript_id=HG01258_ch_T0000358;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000358;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000358:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9526345	9529141	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_G0000138;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG01258_ch_T0000359;Name=TSPY1
HG01258_chrY	CAT	exon	9526345	9526477	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9526391	9526477	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9526391	9526393	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526478	9526738	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9526739	9526876	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9526739	9526876	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526877	9527483	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527484	9527561	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527484	9527561	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527562	9527689	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527690	9527801	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527690	9527801	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527802	9527902	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527903	9528048	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9527903	9528048	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528049	9528154	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528155	9528236	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528155	9528236	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528237	9528930	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528931	9529141	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000359:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9528931	9528953	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000359:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9528951	9528953	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000359;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000359;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9526345	9529141	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_G0000138;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG01258_ch_T0000360;Name=TSPY1
HG01258_chrY	CAT	exon	9526345	9526876	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9526877	9527483	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527484	9527561	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527562	9527689	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527690	9527801	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9527802	9527909	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9527910	9528048	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528049	9528143	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528144	9528236	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9528237	9528930	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9528931	9529141	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_214.5;transcript_id=HG01258_ch_T0000360;gene_id=HG01258_ch_G0000138;Parent=HG01258_ch_T0000360;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9538411	9544098	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_193.1;gene_id=HG01258_ch_G0000139;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000139;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9538411	9544098	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_G0000139;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000361;Name=FAM197Y2
HG01258_chrY	CAT	exon	9538411	9538470	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000361:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9538471	9542020	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000361:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9542021	9542179	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000361:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9542180	9543675	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000361:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9543676	9543821	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000361:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9543822	9543907	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000361:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9543908	9544098	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1;transcript_id=HG01258_ch_T0000361;gene_id=HG01258_ch_G0000139;Parent=HG01258_ch_T0000361;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000361:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9546622	9549418	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_200;alternative_source_transcripts=hg002_chrY_paternal_218.1;gene_id=HG01258_ch_G0000140;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000140;Name=TSPY10
HG01258_chrY	CAT	transcript	9546622	9549418	100	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_G0000140;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG01258_ch_T0000362;Name=TSPY10
HG01258_chrY	CAT	exon	9546622	9547153	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9546668	9547153	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9546668	9546670	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000362;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547154	9547760	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000362:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547761	9547838	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547761	9547838	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547839	9547966	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000362:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547967	9548078	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547967	9548078	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548079	9548179	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000362:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548180	9548325	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548180	9548325	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548326	9548431	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000362:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548432	9548513	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548432	9548513	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548514	9549207	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000362:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9549208	9549418	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000362:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9549208	9549230	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000362:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9549228	9549230	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000362;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000362;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000362;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9546622	9549418	100	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_G0000140;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG01258_ch_T0000363;Name=TSPY10
HG01258_chrY	CAT	exon	9546622	9547153	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9546668	9547153	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000363:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9546668	9546670	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000363;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547154	9547760	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000363:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547761	9547838	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547761	9547838	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000363:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547839	9547966	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000363:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547967	9548078	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547967	9548078	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000363:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548079	9548179	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000363:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548180	9548325	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548180	9548325	.	+	2	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000363:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548326	9548420	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000363:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548421	9548513	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548421	9548483	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000363:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9548481	9548483	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000363;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548514	9549207	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000363:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9549208	9549418	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000363;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000363;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000363:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9546622	9549418	100	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_G0000140;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG01258_ch_T0000364;Name=TSPY10
HG01258_chrY	CAT	exon	9546622	9547153	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9546668	9547153	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000364:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9546668	9546670	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000364;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547154	9547760	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000364:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547761	9547838	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547761	9547838	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000364:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547839	9547966	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000364:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547967	9548078	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9547967	9548078	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000364:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548079	9548186	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000364:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548187	9548325	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548187	9548325	.	+	2	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000364:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548326	9548431	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000364:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548432	9548513	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9548432	9548483	.	+	1	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000364:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9548481	9548483	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000364;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548514	9549207	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000364:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9549208	9549418	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000364;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000364;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000364:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9546622	9549418	1000	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_G0000140;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=HG01258_ch_T0000365;Name=TSPY10
HG01258_chrY	CAT	exon	9546622	9547153	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547154	9547760	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000365:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547761	9547838	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9547839	9547966	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000365:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9547967	9548078	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548079	9548186	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000365:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548187	9548325	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548326	9548420	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000365:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9548421	9548513	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9548514	9549207	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000365:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9549208	9549418	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000365;gene_id=HG01258_ch_G0000140;Parent=HG01258_ch_T0000365;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000365:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9558711	9564318	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;gene_id=HG01258_ch_G0000141;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000141;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9558711	9564318	1000	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_G0000141;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000366;Name=FAM197Y3
HG01258_chrY	CAT	exon	9558711	9558770	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000366:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9558771	9562321	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000366:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9562322	9562480	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000366:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9562481	9563984	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000366:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9563985	9564130	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000366:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9564131	9564216	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000366:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9564217	9564318	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000366;gene_id=HG01258_ch_G0000141;Parent=HG01258_ch_T0000366;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000366:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9566932	9569746	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;gene_id=HG01258_ch_G0000142;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG01258_ch_G0000142;Name=TSPY1
HG01258_chrY	CAT	transcript	9566932	9569746	9980	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_G0000142;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000367;Name=TSPY1
HG01258_chrY	CAT	exon	9566932	9567064	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9566978	9567064	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9566978	9566980	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000367;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9567065	9567343	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9567344	9567481	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9567344	9567481	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9567482	9568088	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568089	9568166	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568089	9568166	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568167	9568294	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568295	9568406	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568295	9568406	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568407	9568507	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568508	9568653	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568508	9568653	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568654	9568759	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568760	9568841	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568760	9568841	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568842	9569535	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000367:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9569536	9569746	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000367:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9569536	9569558	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000367:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9569556	9569558	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000367;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000367;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000367;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9566932	9569746	9880	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_G0000142;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000368;Name=TSPY1
HG01258_chrY	CAT	exon	9566932	9567481	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9566978	9567481	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9566978	9566980	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000368;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9567482	9568088	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000368:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568089	9568166	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568089	9568166	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568167	9568294	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000368:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568295	9568406	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568295	9568406	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568407	9568514	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000368:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568515	9568653	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568515	9568653	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568654	9568759	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000368:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568760	9568841	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9568760	9568811	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9568809	9568811	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000368;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568842	9569535	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000368:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9569536	9569746	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=297.627;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000368;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000368;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000368:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9566932	9569746	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_G0000142;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG01258_ch_T0000369;Name=TSPY1
HG01258_chrY	CAT	exon	9566932	9567481	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9567482	9568088	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000369:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568089	9568166	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568167	9568294	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000369:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568295	9568406	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568407	9568514	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000369:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568515	9568653	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568654	9568748	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000369:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9568749	9568841	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9568842	9569535	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000369:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9569536	9569746	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000369;gene_id=HG01258_ch_G0000142;Parent=HG01258_ch_T0000369;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000369:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9579000	9584597	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;gene_id=HG01258_ch_G0000143;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG01258_ch_G0000143;Name=FAM197Y7
HG01258_chrY	CAT	transcript	9579000	9584597	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_G0000143;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG01258_ch_T0000370;Name=FAM197Y7
HG01258_chrY	CAT	exon	9579000	9579059	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01258_ch_T0000370:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9579060	9582608	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01258_ch_T0000370:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9582609	9582767	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01258_ch_T0000370:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9582768	9584263	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01258_ch_T0000370:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9584264	9584409	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01258_ch_T0000370:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9584410	9584495	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG01258_ch_T0000370:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9584496	9584597	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG01258_ch_T0000370;gene_id=HG01258_ch_G0000143;Parent=HG01258_ch_T0000370;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG01258_ch_T0000370:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9587210	9590006	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;gene_id=HG01258_ch_G0000144;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000144;Name=TSPY10
HG01258_chrY	CAT	transcript	9587210	9590006	100	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_G0000144;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000371;Name=TSPY10
HG01258_chrY	CAT	exon	9587210	9587741	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9587256	9587741	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9587256	9587258	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000371;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9587742	9588348	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588349	9588426	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588349	9588426	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588427	9588554	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588555	9588666	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588555	9588666	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588667	9588767	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588768	9588913	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588768	9588913	.	+	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588914	9589008	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589009	9589101	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9589009	9589071	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9589069	9589071	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000371;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9589102	9589795	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589796	9590006	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000371;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000371;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000371:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9587210	9590006	100	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_G0000144;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000372;Name=TSPY10
HG01258_chrY	CAT	exon	9587210	9587741	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9587256	9587741	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9587256	9587258	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000372;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9587742	9588348	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000372:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588349	9588426	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588349	9588426	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588427	9588554	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000372:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588555	9588666	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588555	9588666	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588667	9588767	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000372:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588768	9588913	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588768	9588913	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588914	9589019	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000372:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589020	9589101	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9589020	9589101	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9589102	9589795	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000372:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589796	9590006	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000372:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9589796	9589818	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000372:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9589816	9589818	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000372;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000372;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000372;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9587210	9590006	100	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_G0000144;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000373;Name=TSPY10
HG01258_chrY	CAT	exon	9587210	9587741	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9587256	9587741	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9587256	9587258	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000373;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9587742	9588348	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000373:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588349	9588426	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588349	9588426	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588427	9588554	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000373:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588555	9588666	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588555	9588666	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588667	9588774	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000373:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588775	9588913	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9588775	9588913	.	+	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588914	9589019	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000373:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589020	9589101	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9589020	9589071	.	+	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9589069	9589071	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000373;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9589102	9589795	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000373:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589796	9590006	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000373;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000373;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000373:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9587210	9590006	1000	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_G0000144;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=HG01258_ch_T0000374;Name=TSPY10
HG01258_chrY	CAT	exon	9587210	9587741	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9587742	9588348	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000374:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588349	9588426	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588427	9588554	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000374:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588555	9588666	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588667	9588774	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000374:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9588775	9588913	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9588914	9589008	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000374:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589009	9589101	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9589102	9589795	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000374:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9589796	9590006	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000374;gene_id=HG01258_ch_G0000144;Parent=HG01258_ch_T0000374;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000374:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9599276	9604970	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;gene_id=HG01258_ch_G0000145;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000145;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9599276	9604970	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_G0000145;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000375;Name=FAM197Y2
HG01258_chrY	CAT	exon	9599276	9599335	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000375:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9599336	9602890	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000375:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9602891	9603049	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000375:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9603050	9604547	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000375:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9604548	9604693	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000375:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9604694	9604779	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000375:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9604780	9604970	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000375;gene_id=HG01258_ch_G0000145;Parent=HG01258_ch_T0000375;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000375:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9607494	9610308	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_200.3;gene_id=HG01258_ch_G0000146;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000146;Name=TSPY4
HG01258_chrY	CAT	transcript	9607494	9610308	100	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_G0000146;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01258_ch_T0000376;Name=TSPY4
HG01258_chrY	CAT	exon	9607494	9608043	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9607540	9608043	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000376:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9607540	9607542	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000376;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608044	9608650	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000376:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608651	9608728	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608651	9608728	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000376:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608729	9608856	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000376:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608857	9608968	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608857	9608968	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000376:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608969	9609076	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000376:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609077	9609215	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609077	9609215	.	+	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000376:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609216	9609321	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000376:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609322	9609403	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609322	9609373	.	+	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000376:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9609371	9609373	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000376;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609404	9610097	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000376:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9610098	9610308	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.3;transcript_id=HG01258_ch_T0000376;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000376;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000376:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9607494	9610308	100	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_G0000146;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01258_ch_T0000377;Name=TSPY4
HG01258_chrY	CAT	exon	9607494	9608043	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9607540	9608043	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9607540	9607542	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000377;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608044	9608650	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000377:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608651	9608728	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608651	9608728	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608729	9608856	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000377:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608857	9608968	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608857	9608968	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608969	9609069	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000377:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609070	9609215	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609070	9609215	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609216	9609321	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000377:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609322	9609403	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609322	9609403	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609404	9610097	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000377:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9610098	9610308	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000377:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9610098	9610120	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000377:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9610118	9610120	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.1;transcript_id=HG01258_ch_T0000377;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000377;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000377;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9607494	9610308	100	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_G0000146;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG01258_ch_T0000378;Name=TSPY4
HG01258_chrY	CAT	exon	9607494	9608043	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9607540	9608043	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000378:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9607540	9607542	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000378;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608044	9608650	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000378:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608651	9608728	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608651	9608728	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000378:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608729	9608856	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000378:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608857	9608968	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9608857	9608968	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000378:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608969	9609069	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000378:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609070	9609215	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609070	9609215	.	+	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000378:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609216	9609310	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000378:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609311	9609403	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9609311	9609373	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000378:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9609371	9609373	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000378;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609404	9610097	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000378:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9610098	9610308	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.2;transcript_id=HG01258_ch_T0000378;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000378;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000378:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9607494	9610308	1000	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_G0000146;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG01258_ch_T0000379;Name=TSPY4
HG01258_chrY	CAT	exon	9607494	9608043	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608044	9608650	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000379:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608651	9608728	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608729	9608856	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000379:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9608857	9608968	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9608969	9609076	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000379:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609077	9609215	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609216	9609310	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000379:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9609311	9609403	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9609404	9610097	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000379:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9610098	9610308	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_200.4;transcript_id=HG01258_ch_T0000379;gene_id=HG01258_ch_G0000146;Parent=HG01258_ch_T0000379;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000379:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9619562	9625248	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;gene_id=HG01258_ch_G0000147;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000147;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9619562	9625248	1000	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_G0000147;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000380;Name=FAM197Y2
HG01258_chrY	CAT	exon	9619562	9619621	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000380:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9619622	9623170	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000380:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9623171	9623329	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000380:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9623330	9624825	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000380:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9624826	9624971	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000380:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9624972	9625057	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000380:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9625058	9625248	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000380;gene_id=HG01258_ch_G0000147;Parent=HG01258_ch_T0000380;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000380:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9627772	9630586	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_202;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;gene_id=HG01258_ch_G0000148;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG01258_ch_G0000148;Name=TSPY9
HG01258_chrY	CAT	transcript	9627772	9630586	100	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_G0000148;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=HG01258_ch_T0000381;Name=TSPY9
HG01258_chrY	CAT	exon	9627772	9628321	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9627818	9628321	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9627818	9627820	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000381;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9628322	9628928	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9628929	9629006	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9628929	9629006	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629007	9629134	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629135	9629246	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629135	9629246	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629247	9629347	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629348	9629493	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629348	9629493	.	+	2	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629494	9629599	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629600	9629681	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629600	9629681	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629682	9630375	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9630376	9630586	.	+	.	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000381:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9630376	9630398	.	+	2	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000381:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9630396	9630398	.	+	0	source_transcript=hg002_chrY_paternal_202.1;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_202.1;transcript_id=HG01258_ch_T0000381;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000381;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000381;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9627772	9630586	100	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_G0000148;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=HG01258_ch_T0000382;Name=TSPY9
HG01258_chrY	CAT	exon	9627772	9628321	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9627818	9628321	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9627818	9627820	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9628322	9628928	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9628929	9629006	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9628929	9629006	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629007	9629134	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629135	9629246	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629135	9629246	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629247	9629347	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629348	9629493	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629348	9629493	.	+	2	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629494	9629588	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9629589	9629681	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9629589	9629651	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9629649	9629651	.	+	0	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9629682	9630375	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9630376	9630586	.	+	.	source_transcript=hg002_chrY_paternal_202.2;source_transcript_name=hg002_chrY_paternal_202.2;source_gene=hg002_chrY_paternal_202;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_202;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_202.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_202.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_202.2;transcript_id=HG01258_ch_T0000382;gene_id=HG01258_ch_G0000148;Parent=HG01258_ch_T0000382;transcript_name=hg002_chrY_paternal_202.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000382:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9639844	9645535	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_213;gene_id=HG01258_ch_G0000149;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000149;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9639844	9645535	1000	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_G0000149;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000383;Name=FAM197Y2
HG01258_chrY	CAT	exon	9639844	9639903	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000383:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9639904	9643457	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000383:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9643458	9643616	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000383:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9643617	9645112	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000383:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9645113	9645258	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000383:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9645259	9645344	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000383:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9645345	9645535	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000383;gene_id=HG01258_ch_G0000149;Parent=HG01258_ch_T0000383;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000383:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9648059	9650873	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;gene_id=HG01258_ch_G0000150;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=augTM,transMap;ID=HG01258_ch_G0000150;Name=TSPY10
HG01258_chrY	CAT	transcript	9648059	9650873	9910	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_G0000150;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01258_ch_T0000384;Name=TSPY10
HG01258_chrY	CAT	exon	9648059	9648608	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9648105	9648608	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000384:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9648105	9648107	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000384;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9648609	9649215	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000384:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649216	9649293	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9649216	9649293	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000384:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649294	9649421	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000384:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649422	9649533	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9649422	9649533	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000384:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649534	9649641	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000384:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649642	9649780	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9649642	9649780	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000384:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649781	9649886	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000384:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649887	9649968	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9649887	9649938	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000384:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9649936	9649938	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000384;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649969	9650662	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000384:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9650663	9650873	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=297.966;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000384;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000384;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000384:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9648059	9650873	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_G0000150;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG01258_ch_T0000385;Name=TSPY10
HG01258_chrY	CAT	exon	9648059	9648608	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9648609	9649215	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000385:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649216	9649293	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649294	9649421	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000385:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649422	9649533	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649534	9649641	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000385:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649642	9649780	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649781	9649875	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000385:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9649876	9649968	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9649969	9650662	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000385:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9650663	9650873	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000385;gene_id=HG01258_ch_G0000150;Parent=HG01258_ch_T0000385;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000385:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9660142	9665741	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_205.1;gene_id=HG01258_ch_G0000151;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000151;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9660142	9665741	1000	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_G0000151;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000386;Name=FAM197Y3
HG01258_chrY	CAT	exon	9660142	9660201	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000386:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9660202	9663752	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000386:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9663753	9663911	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000386:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9663912	9665407	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000386:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9665408	9665553	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000386:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9665554	9665639	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000386:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9665640	9665741	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG01258_ch_T0000386;gene_id=HG01258_ch_G0000151;Parent=HG01258_ch_T0000386;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000386:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9668354	9671150	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_228;alternative_source_transcripts=hg002_chrY_paternal_228.1;gene_id=HG01258_ch_G0000152;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000152;Name=TSPY10
HG01258_chrY	CAT	transcript	9668354	9671150	100	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_G0000152;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG01258_ch_T0000387;Name=TSPY10
HG01258_chrY	CAT	exon	9668354	9668885	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9668400	9668885	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9668400	9668402	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000387;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9668886	9669492	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000387:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669493	9669570	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669493	9669570	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669571	9669698	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000387:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669699	9669810	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669699	9669810	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669811	9669911	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000387:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669912	9670057	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669912	9670057	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670058	9670163	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000387:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670164	9670245	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9670164	9670245	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670246	9670939	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000387:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670940	9671150	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000387:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9670940	9670962	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000387:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9670960	9670962	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000387;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000387;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000387;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9668354	9671150	100	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_G0000152;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG01258_ch_T0000388;Name=TSPY10
HG01258_chrY	CAT	exon	9668354	9668885	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9668400	9668885	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000388:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9668400	9668402	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000388;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9668886	9669492	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000388:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669493	9669570	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669493	9669570	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000388:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669571	9669698	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000388:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669699	9669810	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669699	9669810	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000388:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669811	9669911	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000388:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669912	9670057	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669912	9670057	.	+	2	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000388:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670058	9670152	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000388:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670153	9670245	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9670153	9670215	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000388:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9670213	9670215	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000388;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670246	9670939	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000388:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670940	9671150	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000388;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000388;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000388:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9668354	9671150	100	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_G0000152;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=HG01258_ch_T0000389;Name=TSPY10
HG01258_chrY	CAT	exon	9668354	9668885	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9668400	9668885	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000389:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9668400	9668402	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000389;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9668886	9669492	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000389:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669493	9669570	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669493	9669570	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000389:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669571	9669698	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000389:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669699	9669810	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669699	9669810	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000389:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669811	9669918	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000389:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669919	9670057	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9669919	9670057	.	+	2	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000389:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670058	9670163	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000389:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670164	9670245	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9670164	9670215	.	+	1	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000389:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9670213	9670215	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000389;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670246	9670939	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000389:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670940	9671150	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000389;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000389;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000389:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9668354	9671150	1000	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_G0000152;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=HG01258_ch_T0000390;Name=TSPY10
HG01258_chrY	CAT	exon	9668354	9668885	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9668886	9669492	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000390:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669493	9669570	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669571	9669698	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000390:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669699	9669810	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9669811	9669918	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000390:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9669919	9670057	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670058	9670152	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000390:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670153	9670245	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9670246	9670939	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000390:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9670940	9671150	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000390;gene_id=HG01258_ch_G0000152;Parent=HG01258_ch_T0000390;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000390:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9680421	9686028	.	-	.	source_gene_common_name=FAM197Y5;source_gene=hg002_chrY_paternal_205;gene_id=HG01258_ch_G0000153;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG01258_ch_G0000153;Name=FAM197Y5
HG01258_chrY	CAT	transcript	9680421	9686028	1000	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_G0000153;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=HG01258_ch_T0000391;Name=FAM197Y5
HG01258_chrY	CAT	exon	9680421	9680480	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG01258_ch_T0000391:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9680481	9684031	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG01258_ch_T0000391:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9684032	9684190	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG01258_ch_T0000391:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9684191	9685694	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG01258_ch_T0000391:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9685695	9685840	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG01258_ch_T0000391:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9685841	9685926	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG01258_ch_T0000391:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9685927	9686028	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG01258_ch_T0000391;gene_id=HG01258_ch_G0000153;Parent=HG01258_ch_T0000391;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG01258_ch_T0000391:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9688641	9691438	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;gene_id=HG01258_ch_G0000154;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG01258_ch_G0000154;Name=TSPY1
HG01258_chrY	CAT	transcript	9688641	9691438	9950	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_G0000154;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01258_ch_T0000392;Name=TSPY1
HG01258_chrY	CAT	exon	9688641	9688773	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9688687	9688773	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9688687	9688689	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000392;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9688774	9689034	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9689035	9689172	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9689035	9689172	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9689173	9689779	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9689780	9689857	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9689780	9689857	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9689858	9689985	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9689986	9690097	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9689986	9690097	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9690098	9690198	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9690199	9690344	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9690199	9690344	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9690345	9690450	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9690451	9690532	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9690451	9690532	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9690533	9691226	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000392:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9691227	9691438	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000392:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9691227	9691249	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000392:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9691247	9691249	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000392;gene_id=HG01258_ch_G0000154;Parent=HG01258_ch_T0000392;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000392;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9700740	9706424	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_231.1;gene_id=HG01258_ch_G0000155;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000155;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9700740	9706424	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_G0000155;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000393;Name=FAM197Y2
HG01258_chrY	CAT	exon	9700740	9700799	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000393:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9700800	9704346	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000393:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9704347	9704505	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000393:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9704506	9706001	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000393:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9706002	9706147	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000393:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9706148	9706233	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000393:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9706234	9706424	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000393;gene_id=HG01258_ch_G0000155;Parent=HG01258_ch_T0000393;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000393:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9708949	9711745	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_232.1;gene_id=HG01258_ch_G0000156;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000156;Name=TSPY1
HG01258_chrY	CAT	transcript	9708949	9711745	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_G0000156;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000394;Name=TSPY1
HG01258_chrY	CAT	exon	9708949	9709480	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9708995	9709480	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000394:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9708995	9708997	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000394;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709481	9710087	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000394:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710088	9710165	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710088	9710165	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000394:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710166	9710293	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000394:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710294	9710405	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710294	9710405	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000394:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710406	9710506	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000394:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710507	9710652	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710507	9710652	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000394:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710653	9710747	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000394:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710748	9710840	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710748	9710810	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000394:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9710808	9710810	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000394;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710841	9711534	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000394:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9711535	9711745	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000394;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000394;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000394:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9708949	9711745	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_G0000156;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000395;Name=TSPY1
HG01258_chrY	CAT	exon	9708949	9709081	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9708995	9709081	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9708995	9708997	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000395;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709082	9709342	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9709343	9709480	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9709343	9709480	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709481	9710087	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710088	9710165	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710088	9710165	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710166	9710293	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710294	9710405	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710294	9710405	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710406	9710506	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710507	9710652	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710507	9710652	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710653	9710758	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710759	9710840	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710759	9710840	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710841	9711534	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000395:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9711535	9711745	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000395:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9711535	9711557	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000395:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9711555	9711557	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000395;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000395;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000395;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9708949	9711745	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_G0000156;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000396;Name=TSPY1
HG01258_chrY	CAT	exon	9708949	9709480	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9708995	9709480	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9708995	9708997	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000396;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709481	9710087	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000396:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710088	9710165	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710088	9710165	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710166	9710293	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000396:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710294	9710405	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710294	9710405	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710406	9710506	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000396:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710507	9710652	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710507	9710652	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710653	9710758	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000396:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710759	9710840	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710759	9710840	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710841	9711534	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000396:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9711535	9711745	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000396:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9711535	9711557	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000396:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9711555	9711557	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000396;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000396;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000396;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9708949	9711745	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_G0000156;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG01258_ch_T0000397;Name=TSPY1
HG01258_chrY	CAT	exon	9708949	9709480	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9708995	9709480	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000397:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9708995	9708997	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000397;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709481	9710087	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000397:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710088	9710165	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710088	9710165	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000397:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710166	9710293	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000397:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710294	9710405	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710294	9710405	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000397:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710406	9710513	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000397:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710514	9710652	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710514	9710652	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000397:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710653	9710758	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000397:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710759	9710840	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9710759	9710810	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000397:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9710808	9710810	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000397;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710841	9711534	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000397:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9711535	9711745	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000397;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000397;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000397:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9708949	9711745	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_G0000156;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG01258_ch_T0000398;Name=TSPY1
HG01258_chrY	CAT	exon	9708949	9709480	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9709481	9710087	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000398:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710088	9710165	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710166	9710293	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000398:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710294	9710405	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710406	9710513	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000398:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710514	9710652	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710653	9710747	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000398:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9710748	9710840	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9710841	9711534	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000398:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9711535	9711745	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000398;gene_id=HG01258_ch_G0000156;Parent=HG01258_ch_T0000398;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000398:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9721034	9726722	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=HG01258_ch_G0000157;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000157;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9721034	9726722	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_G0000157;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000399;Name=FAM197Y2
HG01258_chrY	CAT	exon	9721034	9721093	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000399:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9721094	9724642	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000399:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9724643	9724801	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000399:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9724802	9726299	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000399:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9726300	9726445	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000399:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9726446	9726531	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000399:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9726532	9726722	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG01258_ch_T0000399;gene_id=HG01258_ch_G0000157;Parent=HG01258_ch_T0000399;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000399:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9729246	9732042	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_234.1;gene_id=HG01258_ch_G0000158;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000158;Name=TSPY1
HG01258_chrY	CAT	transcript	9729246	9732042	100	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_G0000158;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01258_ch_T0000400;Name=TSPY1
HG01258_chrY	CAT	exon	9729246	9729777	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9729292	9729777	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9729292	9729294	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000400;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729778	9730384	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000400:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730385	9730462	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730385	9730462	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730463	9730590	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000400:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730591	9730702	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730591	9730702	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730703	9730803	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000400:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730804	9730949	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730804	9730949	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730950	9731055	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000400:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731056	9731137	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731056	9731137	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9731138	9731831	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000400:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731832	9732042	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000400:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731832	9731854	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000400:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9731852	9731854	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000400;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000400;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000400;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9729246	9732042	100	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_G0000158;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01258_ch_T0000401;Name=TSPY1
HG01258_chrY	CAT	exon	9729246	9729777	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9729292	9729777	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000401:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9729292	9729294	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000401;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729778	9730384	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000401:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730385	9730462	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730385	9730462	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000401:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730463	9730590	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000401:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730591	9730702	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730591	9730702	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000401:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730703	9730803	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000401:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730804	9730949	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730804	9730949	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000401:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730950	9731044	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000401:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731045	9731137	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731045	9731107	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000401:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9731105	9731107	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000401;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9731138	9731831	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000401:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731832	9732042	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000401;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000401;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000401:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9729246	9732042	100	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_G0000158;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01258_ch_T0000402;Name=TSPY1
HG01258_chrY	CAT	exon	9729246	9729777	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9729292	9729777	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000402:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9729292	9729294	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000402;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729778	9730384	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000402:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730385	9730462	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730385	9730462	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000402:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730463	9730590	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000402:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730591	9730702	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730591	9730702	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000402:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730703	9730810	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000402:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730811	9730949	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730811	9730949	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000402:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730950	9731055	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000402:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731056	9731137	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731056	9731107	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000402:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9731105	9731107	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000402;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9731138	9731831	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000402:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731832	9732042	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000402;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000402;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000402:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9729246	9732042	100	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_G0000158;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG01258_ch_T0000403;Name=TSPY1
HG01258_chrY	CAT	exon	9729246	9729378	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9729292	9729378	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9729292	9729294	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000403;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729379	9729639	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9729640	9729777	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9729640	9729777	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729778	9730384	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730385	9730462	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730385	9730462	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730463	9730590	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730591	9730702	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730591	9730702	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730703	9730803	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730804	9730949	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9730804	9730949	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730950	9731055	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731056	9731137	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731056	9731137	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9731138	9731831	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000403:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731832	9732042	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000403:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9731832	9731854	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000403:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9731852	9731854	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG01258_ch_T0000403;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000403;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000403;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9729246	9732042	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_G0000158;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=HG01258_ch_T0000404;Name=TSPY1
HG01258_chrY	CAT	exon	9729246	9729777	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9729778	9730384	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000404:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730385	9730462	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730463	9730590	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000404:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730591	9730702	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730703	9730810	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000404:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9730811	9730949	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9730950	9731044	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000404:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731045	9731137	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9731138	9731831	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000404:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9731832	9732042	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000404;gene_id=HG01258_ch_G0000158;Parent=HG01258_ch_T0000404;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000404:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9741314	9747016	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_235.1;gene_id=HG01258_ch_G0000159;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000159;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9741314	9747016	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_G0000159;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000405;Name=FAM197Y2
HG01258_chrY	CAT	exon	9741314	9741373	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000405:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9741374	9744928	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000405:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9744929	9745087	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000405:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9745088	9746593	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000405:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9746594	9746739	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000405:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9746740	9746825	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000405:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9746826	9747016	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1;transcript_id=HG01258_ch_T0000405;gene_id=HG01258_ch_G0000159;Parent=HG01258_ch_T0000405;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000405:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9749540	9752336	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;gene_id=HG01258_ch_G0000160;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=augTM,transMap;ID=HG01258_ch_G0000160;Name=TSPY10P
HG01258_chrY	CAT	transcript	9749540	9752336	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_G0000160;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000406;Name=TSPY10P
HG01258_chrY	CAT	exon	9749540	9750071	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9749586	9750071	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000406:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9749586	9749588	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01258_ch_T0000406;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750072	9750678	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000406:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9750679	9750756	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9750679	9750756	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000406:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750757	9750884	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000406:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9750885	9750996	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9750885	9750996	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000406:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750997	9751097	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000406:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9751098	9751243	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9751098	9751132	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000406:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9751244	9751349	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000406:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9751350	9751431	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9751432	9752125	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000406:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9752126	9752336	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=299.74199999999996;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000406;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000406;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000406:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9749540	9752336	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_G0000160;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000407;Name=TSPY10P
HG01258_chrY	CAT	exon	9749540	9750071	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9749586	9750071	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000407:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9749586	9749588	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01258_ch_T0000407;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750072	9750678	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000407:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9750679	9750756	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9750679	9750756	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000407:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750757	9750884	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000407:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9750885	9750996	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9750885	9750996	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000407:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9750997	9751097	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000407:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9751098	9751243	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9751098	9751132	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000407:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9751244	9751338	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000407:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9751339	9751431	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9751432	9752125	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000407:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9752126	9752336	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=299.744;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000407;gene_id=HG01258_ch_G0000160;Parent=HG01258_ch_T0000407;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000407:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9761631	9767324	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_215;alternative_source_transcripts=hg002_chrY_paternal_215.1;gene_id=HG01258_ch_G0000161;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000161;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9761631	9767324	1000	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_G0000161;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000408;Name=FAM197Y2
HG01258_chrY	CAT	exon	9761631	9761690	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000408:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9761691	9765240	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000408:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9765241	9765399	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000408:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9765400	9766901	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000408:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9766902	9767047	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000408:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9767048	9767133	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000408:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9767134	9767324	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1;transcript_id=HG01258_ch_T0000408;gene_id=HG01258_ch_G0000161;Parent=HG01258_ch_T0000408;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000408:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9769848	9772662	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_238.1;gene_id=HG01258_ch_G0000162;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000162;Name=TSPY4
HG01258_chrY	CAT	transcript	9769848	9772662	100	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_G0000162;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01258_ch_T0000409;Name=TSPY4
HG01258_chrY	CAT	exon	9769848	9770397	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9769894	9770397	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9769894	9769896	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000409;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9770398	9771004	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000409:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771005	9771082	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771005	9771082	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771083	9771210	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000409:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771211	9771322	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771211	9771322	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771323	9771423	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000409:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771424	9771569	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771424	9771569	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771570	9771675	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000409:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771676	9771757	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771676	9771757	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771758	9772451	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000409:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9772452	9772662	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000409:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9772452	9772474	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000409:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9772472	9772474	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.1;transcript_id=HG01258_ch_T0000409;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000409;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000409;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9769848	9772662	100	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_G0000162;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01258_ch_T0000410;Name=TSPY4
HG01258_chrY	CAT	exon	9769848	9770397	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9769894	9770397	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000410:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9769894	9769896	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000410;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9770398	9771004	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000410:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771005	9771082	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771005	9771082	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000410:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771083	9771210	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000410:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771211	9771322	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771211	9771322	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000410:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771323	9771423	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000410:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771424	9771569	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771424	9771569	.	+	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000410:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771570	9771664	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000410:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771665	9771757	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771665	9771727	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000410:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9771725	9771727	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000410;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771758	9772451	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000410:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9772452	9772662	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.2;transcript_id=HG01258_ch_T0000410;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000410;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000410:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9769848	9772662	100	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_G0000162;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG01258_ch_T0000411;Name=TSPY4
HG01258_chrY	CAT	exon	9769848	9770397	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9769894	9770397	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000411:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9769894	9769896	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000411;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9770398	9771004	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000411:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771005	9771082	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771005	9771082	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000411:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771083	9771210	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000411:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771211	9771322	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771211	9771322	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000411:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771323	9771430	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000411:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771431	9771569	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771431	9771569	.	+	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000411:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771570	9771675	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000411:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771676	9771757	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9771676	9771727	.	+	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000411:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9771725	9771727	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000411;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771758	9772451	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000411:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9772452	9772662	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.3;transcript_id=HG01258_ch_T0000411;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000411;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000411:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9769848	9772662	1000	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_G0000162;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG01258_ch_T0000412;Name=TSPY4
HG01258_chrY	CAT	exon	9769848	9770397	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9770398	9771004	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000412:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771005	9771082	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771083	9771210	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000412:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771211	9771322	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771323	9771430	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000412:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771431	9771569	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771570	9771664	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000412:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9771665	9771757	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9771758	9772451	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000412:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9772452	9772662	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_238.4;transcript_id=HG01258_ch_T0000412;gene_id=HG01258_ch_G0000162;Parent=HG01258_ch_T0000412;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000412:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9781932	9787545	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;alternative_source_transcripts=hg002_chrY_paternal_217.1;gene_id=HG01258_ch_G0000163;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG01258_ch_G0000163;Name=FAM197Y6
HG01258_chrY	CAT	transcript	9781932	9787545	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_G0000163;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG01258_ch_T0000413;Name=FAM197Y6
HG01258_chrY	CAT	exon	9781932	9781991	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01258_ch_T0000413:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9781992	9785546	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01258_ch_T0000413:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9785547	9785705	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01258_ch_T0000413:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9785706	9787211	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01258_ch_T0000413:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9787212	9787357	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01258_ch_T0000413:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9787358	9787443	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG01258_ch_T0000413:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9787444	9787545	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_217.1;transcript_id=HG01258_ch_T0000413;gene_id=HG01258_ch_G0000163;Parent=HG01258_ch_T0000413;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG01258_ch_T0000413:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9790158	9792955	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_218.1;gene_id=HG01258_ch_G0000164;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000164;Name=TSPY10
HG01258_chrY	CAT	transcript	9790158	9792955	100	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_G0000164;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01258_ch_T0000414;Name=TSPY10
HG01258_chrY	CAT	exon	9790158	9790689	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9790204	9790689	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9790204	9790206	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000414;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9790690	9791296	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000414:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791297	9791374	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791297	9791374	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791375	9791502	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000414:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791503	9791614	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791503	9791614	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791615	9791715	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000414:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791716	9791861	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791716	9791861	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791862	9791967	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000414:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791968	9792049	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791968	9792049	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9792050	9792743	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000414:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9792744	9792955	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000414:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9792744	9792766	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000414:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9792764	9792766	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1;transcript_id=HG01258_ch_T0000414;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000414;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000414;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9790158	9792955	100	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_G0000164;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01258_ch_T0000415;Name=TSPY10
HG01258_chrY	CAT	exon	9790158	9790689	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9790204	9790689	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000415:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9790204	9790206	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000415;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9790690	9791296	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000415:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791297	9791374	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791297	9791374	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000415:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791375	9791502	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000415:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791503	9791614	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791503	9791614	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000415:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791615	9791715	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000415:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791716	9791861	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791716	9791861	.	+	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000415:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791862	9791956	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000415:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791957	9792049	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791957	9792019	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000415:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9792017	9792019	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000415;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9792050	9792743	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000415:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9792744	9792955	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2;transcript_id=HG01258_ch_T0000415;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000415;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000415:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9790158	9792955	100	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_G0000164;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG01258_ch_T0000416;Name=TSPY10
HG01258_chrY	CAT	exon	9790158	9790689	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9790204	9790689	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000416:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9790204	9790206	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000416;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9790690	9791296	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000416:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791297	9791374	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791297	9791374	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000416:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791375	9791502	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000416:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791503	9791614	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791503	9791614	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000416:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791615	9791722	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000416:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791723	9791861	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791723	9791861	.	+	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000416:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791862	9791967	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000416:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791968	9792049	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9791968	9792019	.	+	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000416:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9792017	9792019	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000416;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9792050	9792743	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000416:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9792744	9792955	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3;transcript_id=HG01258_ch_T0000416;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000416;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000416:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9790158	9792955	1000	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_G0000164;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG01258_ch_T0000417;Name=TSPY10
HG01258_chrY	CAT	exon	9790158	9790689	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9790690	9791296	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000417:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791297	9791374	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791375	9791502	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000417:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791503	9791614	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791615	9791722	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000417:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791723	9791861	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9791862	9791956	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000417:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9791957	9792049	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9792050	9792743	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000417:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9792744	9792955	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4;transcript_id=HG01258_ch_T0000417;gene_id=HG01258_ch_G0000164;Parent=HG01258_ch_T0000417;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000417:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9802259	9807949	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_219;alternative_source_transcripts=hg002_chrY_paternal_219.1;gene_id=HG01258_ch_G0000165;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000165;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9802259	9807949	1000	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_G0000165;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000418;Name=FAM197Y2
HG01258_chrY	CAT	exon	9802259	9802318	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000418:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9802319	9805869	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000418:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9805870	9806028	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000418:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9806029	9807526	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000418:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9807527	9807672	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000418:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9807673	9807758	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000418:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9807759	9807949	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG01258_ch_T0000418;gene_id=HG01258_ch_G0000165;Parent=HG01258_ch_T0000418;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000418:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9810474	9813270	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_220.1;gene_id=HG01258_ch_G0000166;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000166;Name=TSPY1
HG01258_chrY	CAT	transcript	9810474	9813270	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_G0000166;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000419;Name=TSPY1
HG01258_chrY	CAT	exon	9810474	9811005	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9810520	9811005	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000419:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9810520	9810522	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000419;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811006	9811612	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000419:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811613	9811690	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811613	9811690	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000419:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811691	9811818	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000419:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811819	9811930	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811819	9811930	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000419:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811931	9812031	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000419:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812032	9812177	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812032	9812177	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000419:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812178	9812272	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000419:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812273	9812365	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812273	9812335	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000419:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9812333	9812335	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000419;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812366	9813059	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000419:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9813060	9813270	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1;transcript_id=HG01258_ch_T0000419;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000419;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000419:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9810474	9813270	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_G0000166;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000420;Name=TSPY1
HG01258_chrY	CAT	exon	9810474	9811005	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9810520	9811005	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9810520	9810522	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000420;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811006	9811612	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000420:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811613	9811690	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811613	9811690	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811691	9811818	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000420:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811819	9811930	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811819	9811930	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811931	9812031	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000420:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812032	9812177	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812032	9812177	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812178	9812283	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000420:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812284	9812365	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812284	9812365	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812366	9813059	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000420:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9813060	9813270	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000420:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9813060	9813082	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000420:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9813080	9813082	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3;transcript_id=HG01258_ch_T0000420;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000420;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000420;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9810474	9813270	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_G0000166;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000421;Name=TSPY1
HG01258_chrY	CAT	exon	9810474	9810606	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9810520	9810606	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9810520	9810522	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000421;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9810607	9810867	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9810868	9811005	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9810868	9811005	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811006	9811612	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811613	9811690	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811613	9811690	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811691	9811818	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811819	9811930	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811819	9811930	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811931	9812031	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812032	9812177	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812032	9812177	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812178	9812283	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812284	9812365	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812284	9812365	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812366	9813059	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000421:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9813060	9813270	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000421:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9813060	9813082	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000421:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9813080	9813082	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG01258_ch_T0000421;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000421;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000421;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9810474	9813270	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_G0000166;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG01258_ch_T0000422;Name=TSPY1
HG01258_chrY	CAT	exon	9810474	9811005	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9810520	9811005	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000422:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9810520	9810522	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000422;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811006	9811612	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000422:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811613	9811690	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811613	9811690	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000422:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811691	9811818	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000422:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811819	9811930	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9811819	9811930	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000422:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811931	9812038	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000422:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812039	9812177	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812039	9812177	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000422:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812178	9812283	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000422:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812284	9812365	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9812284	9812335	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000422:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9812333	9812335	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000422;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812366	9813059	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000422:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9813060	9813270	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4;transcript_id=HG01258_ch_T0000422;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000422;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000422:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9810474	9813270	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_G0000166;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG01258_ch_T0000423;Name=TSPY1
HG01258_chrY	CAT	exon	9810474	9811005	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811006	9811612	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000423:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811613	9811690	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811691	9811818	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000423:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9811819	9811930	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9811931	9812038	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000423:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812039	9812177	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812178	9812272	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000423:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9812273	9812365	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9812366	9813059	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000423:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9813060	9813270	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5;transcript_id=HG01258_ch_T0000423;gene_id=HG01258_ch_G0000166;Parent=HG01258_ch_T0000423;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000423:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9822553	9828243	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;gene_id=HG01258_ch_G0000167;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000167;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9822553	9828243	1000	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_G0000167;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000424;Name=FAM197Y2
HG01258_chrY	CAT	exon	9822553	9822612	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000424:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9822613	9826161	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000424:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9826162	9826320	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000424:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9826321	9827820	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000424:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9827821	9827966	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000424:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9827967	9828052	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000424:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9828053	9828243	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000424;gene_id=HG01258_ch_G0000167;Parent=HG01258_ch_T0000424;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000424:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9830767	9833581	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_222;alternative_source_transcripts=hg002_chrY_paternal_222.2;gene_id=HG01258_ch_G0000168;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG01258_ch_G0000168;Name=TSPY4
HG01258_chrY	CAT	transcript	9830767	9833581	100	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_G0000168;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG01258_ch_T0000425;Name=TSPY4
HG01258_chrY	CAT	exon	9830767	9831316	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9830813	9831316	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000425:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9830813	9830815	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000425;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9831317	9831923	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000425:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9831924	9832001	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9831924	9832001	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000425:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832002	9832129	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000425:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832130	9832241	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832130	9832241	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000425:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832242	9832342	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000425:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832343	9832488	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832343	9832488	.	+	2	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000425:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832489	9832583	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000425:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832584	9832676	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832584	9832646	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000425:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9832644	9832646	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000425;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832677	9833370	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000425:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9833371	9833581	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2;transcript_id=HG01258_ch_T0000425;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000425;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000425:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9830767	9833581	100	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_G0000168;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG01258_ch_T0000426;Name=TSPY4
HG01258_chrY	CAT	exon	9830767	9831316	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9830813	9831316	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9830813	9830815	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000426;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9831317	9831923	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000426:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9831924	9832001	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9831924	9832001	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832002	9832129	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000426:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832130	9832241	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832130	9832241	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832242	9832342	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000426:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832343	9832488	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832343	9832488	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832489	9832594	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000426:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832595	9832676	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832595	9832676	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832677	9833370	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000426:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9833371	9833581	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000426:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9833371	9833393	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000426:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9833391	9833393	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1;transcript_id=HG01258_ch_T0000426;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000426;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000426;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9830767	9833581	100	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_G0000168;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG01258_ch_T0000427;Name=TSPY4
HG01258_chrY	CAT	exon	9830767	9831316	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9830813	9831316	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000427:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9830813	9830815	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG01258_ch_T0000427;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9831317	9831923	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000427:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9831924	9832001	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9831924	9832001	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000427:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832002	9832129	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000427:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832130	9832241	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832130	9832241	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000427:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832242	9832349	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000427:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832350	9832488	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832350	9832488	.	+	2	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000427:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832489	9832594	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000427:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832595	9832676	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9832595	9832646	.	+	1	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG01258_ch_T0000427:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9832644	9832646	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG01258_ch_T0000427;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832677	9833370	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG01258_ch_T0000427:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9833371	9833581	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3;transcript_id=HG01258_ch_T0000427;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000427;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG01258_ch_T0000427:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9830767	9833581	1000	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_G0000168;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=HG01258_ch_T0000428;Name=TSPY4
HG01258_chrY	CAT	exon	9830767	9831316	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9831317	9831923	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000428:0;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9831924	9832001	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832002	9832129	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000428:1;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832130	9832241	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832242	9832349	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000428:2;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832350	9832488	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832489	9832583	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000428:3;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9832584	9832676	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9832677	9833370	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG01258_ch_T0000428:4;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9833371	9833581	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4;transcript_id=HG01258_ch_T0000428;gene_id=HG01258_ch_G0000168;Parent=HG01258_ch_T0000428;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG01258_ch_T0000428:5;Name=TSPY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9842864	9848452	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;gene_id=HG01258_ch_G0000169;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG01258_ch_G0000169;Name=FAM197Y4
HG01258_chrY	CAT	transcript	9842864	9848452	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_G0000169;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG01258_ch_T0000429;Name=FAM197Y4
HG01258_chrY	CAT	exon	9842864	9842923	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01258_ch_T0000429:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9842924	9846472	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01258_ch_T0000429:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9846473	9846631	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01258_ch_T0000429:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9846632	9848118	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01258_ch_T0000429:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9848119	9848264	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01258_ch_T0000429:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9848265	9848350	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG01258_ch_T0000429:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9848351	9848452	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG01258_ch_T0000429;gene_id=HG01258_ch_G0000169;Parent=HG01258_ch_T0000429;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG01258_ch_T0000429:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9851065	9853879	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_224;alternative_source_transcripts=hg002_chrY_paternal_224.1;gene_id=HG01258_ch_G0000170;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG01258_ch_G0000170;Name=TSPY9
HG01258_chrY	CAT	transcript	9851065	9853879	100	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_G0000170;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=HG01258_ch_T0000430;Name=TSPY9
HG01258_chrY	CAT	exon	9851065	9851614	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9851111	9851614	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9851111	9851113	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000430;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9851615	9852221	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000430:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852222	9852299	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852222	9852299	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852300	9852427	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000430:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852428	9852539	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852428	9852539	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852540	9852640	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000430:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852641	9852786	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852641	9852786	.	+	2	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852787	9852892	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000430:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852893	9852974	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852893	9852974	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852975	9853668	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000430:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9853669	9853879	.	+	.	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000430:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9853669	9853691	.	+	2	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000430:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9853689	9853691	.	+	0	source_transcript=hg002_chrY_paternal_224.1;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.1;transcript_id=HG01258_ch_T0000430;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000430;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000430;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9851065	9853879	100	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_G0000170;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=HG01258_ch_T0000431;Name=TSPY9
HG01258_chrY	CAT	exon	9851065	9851614	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9851111	9851614	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000431:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9851111	9851113	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000431;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9851615	9852221	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000431:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852222	9852299	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852222	9852299	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000431:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852300	9852427	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000431:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852428	9852539	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852428	9852539	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000431:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852540	9852640	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000431:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852641	9852786	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852641	9852786	.	+	2	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000431:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852787	9852881	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000431:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9852882	9852974	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9852882	9852944	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000431:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9852942	9852944	.	+	0	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000431;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9852975	9853668	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000431:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9853669	9853879	.	+	.	source_transcript=hg002_chrY_paternal_224.2;source_transcript_name=hg002_chrY_paternal_224.2;source_gene=hg002_chrY_paternal_224;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_224;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_224.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_224.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_224.2;transcript_id=HG01258_ch_T0000431;gene_id=HG01258_ch_G0000170;Parent=HG01258_ch_T0000431;transcript_name=hg002_chrY_paternal_224.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000431:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9863149	9868758	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_225.1;gene_id=HG01258_ch_G0000171;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000171;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9863149	9868758	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_G0000171;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000432;Name=FAM197Y3
HG01258_chrY	CAT	exon	9863149	9863208	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000432:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9863209	9866759	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000432:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9866760	9866918	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000432:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9866919	9868424	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000432:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9868425	9868570	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000432:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9868571	9868656	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000432:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9868657	9868758	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG01258_ch_T0000432;gene_id=HG01258_ch_G0000171;Parent=HG01258_ch_T0000432;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000432:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9871367	9874163	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;gene_id=HG01258_ch_G0000172;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000172;Name=TSPY10
HG01258_chrY	CAT	transcript	9871367	9874163	100	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_G0000172;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000433;Name=TSPY10
HG01258_chrY	CAT	exon	9871367	9871898	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9871413	9871898	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9871413	9871415	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000433;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9871899	9872505	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000433:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872506	9872583	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872506	9872583	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872584	9872711	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000433:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872712	9872823	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872712	9872823	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872824	9872924	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000433:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872925	9873070	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872925	9873070	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873071	9873176	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000433:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873177	9873258	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9873177	9873258	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873259	9873952	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000433:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873953	9874163	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000433:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9873953	9873975	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000433:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9873973	9873975	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000433;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000433;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000433;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9871367	9874163	100	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_G0000172;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000434;Name=TSPY10
HG01258_chrY	CAT	exon	9871367	9871898	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9871413	9871898	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000434:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9871413	9871415	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000434;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9871899	9872505	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000434:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872506	9872583	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872506	9872583	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000434:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872584	9872711	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000434:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872712	9872823	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872712	9872823	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000434:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872824	9872924	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000434:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872925	9873070	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872925	9873070	.	+	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000434:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873071	9873165	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000434:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873166	9873258	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9873166	9873228	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000434:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9873226	9873228	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000434;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873259	9873952	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000434:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873953	9874163	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000434;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000434;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000434:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9871367	9874163	100	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_G0000172;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=HG01258_ch_T0000435;Name=TSPY10
HG01258_chrY	CAT	exon	9871367	9871898	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9871413	9871898	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000435:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9871413	9871415	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000435;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9871899	9872505	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000435:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872506	9872583	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872506	9872583	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000435:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872584	9872711	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000435:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872712	9872823	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872712	9872823	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000435:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872824	9872931	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000435:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872932	9873070	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9872932	9873070	.	+	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000435:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873071	9873176	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000435:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873177	9873258	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9873177	9873228	.	+	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000435:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9873226	9873228	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000435;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873259	9873952	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000435:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873953	9874163	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000435;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000435;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000435:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9871367	9874163	1000	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_G0000172;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=HG01258_ch_T0000436;Name=TSPY10
HG01258_chrY	CAT	exon	9871367	9871898	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9871899	9872505	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000436:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872506	9872583	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872584	9872711	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000436:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872712	9872823	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9872824	9872931	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000436:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9872932	9873070	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873071	9873165	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000436:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873166	9873258	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9873259	9873952	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000436:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9873953	9874163	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000436;gene_id=HG01258_ch_G0000172;Parent=HG01258_ch_T0000436;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000436:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9883437	9889130	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;alternative_source_transcripts=hg002_chrY_paternal_227.1;gene_id=HG01258_ch_G0000173;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000173;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9883437	9889130	1000	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_G0000173;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000437;Name=FAM197Y2
HG01258_chrY	CAT	exon	9883437	9883496	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000437:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9883497	9887046	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000437:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9887047	9887205	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000437:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9887206	9888707	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000437:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9888708	9888853	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000437:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9888854	9888939	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000437:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9888940	9889130	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG01258_ch_T0000437;gene_id=HG01258_ch_G0000173;Parent=HG01258_ch_T0000437;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000437:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9891654	9894450	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_228.1;gene_id=HG01258_ch_G0000174;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000174;Name=TSPY10
HG01258_chrY	CAT	transcript	9891654	9894450	100	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_G0000174;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01258_ch_T0000438;Name=TSPY10
HG01258_chrY	CAT	exon	9891654	9892185	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9891700	9892185	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9891700	9891702	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000438;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892186	9892792	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000438:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892793	9892870	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892793	9892870	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892871	9892998	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000438:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892999	9893110	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892999	9893110	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893111	9893211	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000438:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893212	9893357	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893212	9893357	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893358	9893463	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000438:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893464	9893545	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893464	9893545	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893546	9894239	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000438:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9894240	9894450	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000438:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9894240	9894262	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000438:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9894260	9894262	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1;transcript_id=HG01258_ch_T0000438;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000438;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000438;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9891654	9894450	100	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_G0000174;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01258_ch_T0000439;Name=TSPY10
HG01258_chrY	CAT	exon	9891654	9892185	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9891700	9892185	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000439:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9891700	9891702	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000439;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892186	9892792	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000439:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892793	9892870	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892793	9892870	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000439:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892871	9892998	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000439:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892999	9893110	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892999	9893110	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000439:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893111	9893218	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000439:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893219	9893357	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893219	9893357	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000439:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893358	9893463	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000439:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893464	9893545	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893464	9893515	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000439:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9893513	9893515	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000439;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893546	9894239	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000439:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9894240	9894450	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3;transcript_id=HG01258_ch_T0000439;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000439;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000439:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9891654	9894450	100	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_G0000174;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG01258_ch_T0000440;Name=TSPY10
HG01258_chrY	CAT	exon	9891654	9892185	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9891700	9892185	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000440:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9891700	9891702	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000440;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892186	9892792	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000440:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892793	9892870	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892793	9892870	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000440:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892871	9892998	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000440:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892999	9893110	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9892999	9893110	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000440:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893111	9893211	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000440:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893212	9893357	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893212	9893357	.	+	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000440:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893358	9893452	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000440:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893453	9893545	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9893453	9893515	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000440:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9893513	9893515	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000440;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893546	9894239	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000440:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9894240	9894450	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2;transcript_id=HG01258_ch_T0000440;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000440;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000440:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9891654	9894450	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_G0000174;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG01258_ch_T0000441;Name=TSPY10
HG01258_chrY	CAT	exon	9891654	9892185	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892186	9892792	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000441:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892793	9892870	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9892871	9892998	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000441:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9892999	9893110	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893111	9893218	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000441:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893219	9893357	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893358	9893452	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000441:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9893453	9893545	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9893546	9894239	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000441:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9894240	9894450	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4;transcript_id=HG01258_ch_T0000441;gene_id=HG01258_ch_G0000174;Parent=HG01258_ch_T0000441;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000441:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9903746	9909428	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;gene_id=HG01258_ch_G0000175;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000175;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9903746	9909428	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_G0000175;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000442;Name=FAM197Y2
HG01258_chrY	CAT	exon	9903746	9903805	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000442:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9903806	9907352	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000442:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9907353	9907511	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000442:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9907512	9909005	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000442:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9909006	9909151	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000442:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9909152	9909237	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000442:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9909238	9909428	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000442;gene_id=HG01258_ch_G0000175;Parent=HG01258_ch_T0000442;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000442:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9911953	9914749	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_230.3;gene_id=HG01258_ch_G0000176;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000176;Name=TSPY1
HG01258_chrY	CAT	transcript	9911953	9914749	100	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_G0000176;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01258_ch_T0000443;Name=TSPY1
HG01258_chrY	CAT	exon	9911953	9912484	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9911999	9912484	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9911999	9912001	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000443;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912485	9913091	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000443:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913092	9913169	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913092	9913169	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913170	9913297	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000443:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913298	9913409	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913298	9913409	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913410	9913510	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000443:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913511	9913656	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913511	9913656	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913657	9913762	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000443:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913763	9913844	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913763	9913844	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913845	9914538	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000443:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9914539	9914749	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000443:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9914539	9914561	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000443:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9914559	9914561	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3;transcript_id=HG01258_ch_T0000443;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000443;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000443;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9911953	9914749	100	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_G0000176;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01258_ch_T0000444;Name=TSPY1
HG01258_chrY	CAT	exon	9911953	9912085	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9911999	9912085	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9911999	9912001	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000444;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912086	9912346	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9912347	9912484	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9912347	9912484	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912485	9913091	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913092	9913169	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913092	9913169	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913170	9913297	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913298	9913409	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913298	9913409	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913410	9913510	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913511	9913656	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913511	9913656	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913657	9913762	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913763	9913844	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913763	9913844	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913845	9914538	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000444:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9914539	9914749	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000444:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9914539	9914561	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000444:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9914559	9914561	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG01258_ch_T0000444;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000444;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000444;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9911953	9914749	100	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_G0000176;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01258_ch_T0000445;Name=TSPY1
HG01258_chrY	CAT	exon	9911953	9912484	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9911999	9912484	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000445:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9911999	9912001	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000445;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912485	9913091	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000445:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913092	9913169	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913092	9913169	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000445:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913170	9913297	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000445:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913298	9913409	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913298	9913409	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000445:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913410	9913510	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000445:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913511	9913656	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913511	9913656	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000445:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913657	9913751	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000445:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913752	9913844	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913752	9913814	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000445:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9913812	9913814	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000445;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913845	9914538	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000445:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9914539	9914749	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1;transcript_id=HG01258_ch_T0000445;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000445;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000445:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9911953	9914749	100	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_G0000176;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG01258_ch_T0000446;Name=TSPY1
HG01258_chrY	CAT	exon	9911953	9912484	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9911999	9912484	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000446:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9911999	9912001	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000446;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912485	9913091	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000446:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913092	9913169	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913092	9913169	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000446:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913170	9913297	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000446:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913298	9913409	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913298	9913409	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000446:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913410	9913517	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000446:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913518	9913656	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913518	9913656	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000446:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913657	9913762	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000446:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913763	9913844	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9913763	9913814	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000446:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9913812	9913814	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000446;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913845	9914538	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000446:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9914539	9914749	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4;transcript_id=HG01258_ch_T0000446;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000446;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000446:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9911953	9914749	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_G0000176;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG01258_ch_T0000447;Name=TSPY1
HG01258_chrY	CAT	exon	9911953	9912484	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9912485	9913091	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000447:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913092	9913169	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913170	9913297	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000447:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913298	9913409	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913410	9913517	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000447:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913518	9913656	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913657	9913751	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000447:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9913752	9913844	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9913845	9914538	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000447:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9914539	9914749	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5;transcript_id=HG01258_ch_T0000447;gene_id=HG01258_ch_G0000176;Parent=HG01258_ch_T0000447;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000447:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9924048	9929733	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_231;alternative_source_transcripts=hg002_chrY_paternal_231.1;gene_id=HG01258_ch_G0000177;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000177;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9924048	9929733	1000	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_G0000177;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000448;Name=FAM197Y2
HG01258_chrY	CAT	exon	9924048	9924107	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000448:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9924108	9927657	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000448:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9927658	9927816	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000448:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9927817	9929310	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000448:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9929311	9929456	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000448:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9929457	9929542	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000448:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9929543	9929733	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG01258_ch_T0000448;gene_id=HG01258_ch_G0000177;Parent=HG01258_ch_T0000448;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000448:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9932257	9935053	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_232.1;gene_id=HG01258_ch_G0000178;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG01258_ch_G0000178;Name=TSPY1
HG01258_chrY	CAT	transcript	9932257	9935053	100	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_G0000178;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01258_ch_T0000449;Name=TSPY1
HG01258_chrY	CAT	exon	9932257	9932788	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9932303	9932788	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000449:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9932303	9932305	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000449;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932789	9933395	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000449:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933396	9933473	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933396	9933473	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000449:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933474	9933601	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000449:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933602	9933713	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933602	9933713	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000449:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933714	9933814	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000449:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933815	9933960	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933815	9933960	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000449:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933961	9934055	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000449:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934056	9934148	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934056	9934118	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000449:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9934116	9934118	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000449;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9934149	9934842	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000449:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934843	9935053	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.1;transcript_id=HG01258_ch_T0000449;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000449;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000449:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9932257	9935053	100	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_G0000178;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01258_ch_T0000450;Name=TSPY1
HG01258_chrY	CAT	exon	9932257	9932389	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9932303	9932389	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9932303	9932305	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000450;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932390	9932650	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9932651	9932788	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9932651	9932788	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932789	9933395	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933396	9933473	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933396	9933473	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933474	9933601	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933602	9933713	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933602	9933713	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933714	9933814	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933815	9933960	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933815	9933960	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933961	9934066	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934067	9934148	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934067	9934148	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9934149	9934842	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000450:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934843	9935053	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000450:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934843	9934865	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000450:6;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9934863	9934865	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;transcript_id=HG01258_ch_T0000450;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000450;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000450;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9932257	9935053	100	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_G0000178;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01258_ch_T0000451;Name=TSPY1
HG01258_chrY	CAT	exon	9932257	9932788	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9932303	9932788	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9932303	9932305	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000451;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932789	9933395	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000451:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933396	9933473	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933396	9933473	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933474	9933601	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000451:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933602	9933713	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933602	9933713	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933714	9933814	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000451:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933815	9933960	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933815	9933960	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933961	9934066	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000451:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934067	9934148	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934067	9934148	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9934149	9934842	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000451:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934843	9935053	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000451:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934843	9934865	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000451:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9934863	9934865	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.3;transcript_id=HG01258_ch_T0000451;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000451;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000451;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9932257	9935053	100	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_G0000178;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG01258_ch_T0000452;Name=TSPY1
HG01258_chrY	CAT	exon	9932257	9932788	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9932303	9932788	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000452:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9932303	9932305	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG01258_ch_T0000452;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932789	9933395	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000452:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933396	9933473	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933396	9933473	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000452:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933474	9933601	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000452:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933602	9933713	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933602	9933713	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000452:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933714	9933821	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000452:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933822	9933960	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9933822	9933960	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000452:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933961	9934066	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000452:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934067	9934148	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9934067	9934118	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG01258_ch_T0000452:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9934116	9934118	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG01258_ch_T0000452;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9934149	9934842	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG01258_ch_T0000452:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934843	9935053	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.4;transcript_id=HG01258_ch_T0000452;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000452;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG01258_ch_T0000452:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9932257	9935053	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_G0000178;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=HG01258_ch_T0000453;Name=TSPY1
HG01258_chrY	CAT	exon	9932257	9932788	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9932789	9933395	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000453:0;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933396	9933473	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933474	9933601	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000453:1;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933602	9933713	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933714	9933821	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000453:2;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9933822	9933960	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9933961	9934055	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000453:3;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934056	9934148	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9934149	9934842	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG01258_ch_T0000453:4;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9934843	9935053	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.5;transcript_id=HG01258_ch_T0000453;gene_id=HG01258_ch_G0000178;Parent=HG01258_ch_T0000453;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG01258_ch_T0000453:5;Name=TSPY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9944325	9950010	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;gene_id=HG01258_ch_G0000179;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000179;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9944325	9950010	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_G0000179;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000454;Name=FAM197Y2
HG01258_chrY	CAT	exon	9944325	9944384	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000454:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9944385	9947934	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000454:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9947935	9948093	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000454:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9948094	9949587	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000454:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9949588	9949733	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000454:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9949734	9949819	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000454:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9949820	9950010	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000454;gene_id=HG01258_ch_G0000179;Parent=HG01258_ch_T0000454;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000454:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9952534	9955331	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_234.2;gene_id=HG01258_ch_G0000180;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000180;Name=TSPY10
HG01258_chrY	CAT	transcript	9952534	9955331	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_G0000180;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01258_ch_T0000455;Name=TSPY10
HG01258_chrY	CAT	exon	9952534	9953065	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9952580	9953065	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000455:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9952580	9952582	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000455;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953066	9953672	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000455:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953673	9953750	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953673	9953750	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000455:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953751	9953878	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000455:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953879	9953990	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953879	9953990	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000455:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953991	9954091	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000455:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954092	9954237	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954092	9954237	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000455:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954238	9954332	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000455:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954333	9954425	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954333	9954395	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000455:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9954393	9954395	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000455;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954426	9955119	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000455:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9955120	9955331	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2;transcript_id=HG01258_ch_T0000455;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000455;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000455:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9952534	9955331	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_G0000180;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01258_ch_T0000456;Name=TSPY10
HG01258_chrY	CAT	exon	9952534	9953065	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9952580	9953065	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9952580	9952582	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000456;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953066	9953672	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000456:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953673	9953750	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953673	9953750	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953751	9953878	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000456:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953879	9953990	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953879	9953990	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953991	9954091	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000456:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954092	9954237	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954092	9954237	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954238	9954343	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000456:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954344	9954425	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954344	9954425	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954426	9955119	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000456:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9955120	9955331	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000456:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9955120	9955142	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000456:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9955140	9955142	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1;transcript_id=HG01258_ch_T0000456;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000456;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000456;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9952534	9955331	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_G0000180;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG01258_ch_T0000457;Name=TSPY10
HG01258_chrY	CAT	exon	9952534	9953065	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9952580	9953065	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000457:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9952580	9952582	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000457;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953066	9953672	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000457:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953673	9953750	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953673	9953750	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000457:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953751	9953878	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000457:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953879	9953990	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9953879	9953990	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000457:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953991	9954098	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000457:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954099	9954237	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954099	9954237	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000457:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954238	9954343	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000457:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954344	9954425	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9954344	9954395	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000457:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9954393	9954395	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000457;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954426	9955119	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000457:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9955120	9955331	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3;transcript_id=HG01258_ch_T0000457;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000457;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000457:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9952534	9955331	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_G0000180;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG01258_ch_T0000458;Name=TSPY10
HG01258_chrY	CAT	exon	9952534	9953065	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953066	9953672	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000458:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953673	9953750	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953751	9953878	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000458:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9953879	9953990	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9953991	9954098	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000458:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954099	9954237	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954238	9954332	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000458:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9954333	9954425	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9954426	9955119	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000458:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9955120	9955331	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4;transcript_id=HG01258_ch_T0000458;gene_id=HG01258_ch_G0000180;Parent=HG01258_ch_T0000458;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000458:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9964623	9970318	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;gene_id=HG01258_ch_G0000181;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG01258_ch_G0000181;Name=FAM197Y2
HG01258_chrY	CAT	transcript	9964623	9970318	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_G0000181;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG01258_ch_T0000459;Name=FAM197Y2
HG01258_chrY	CAT	exon	9964623	9964682	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000459:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9964683	9968232	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000459:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9968233	9968391	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000459:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9968392	9969895	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000459:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9969896	9970041	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000459:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9970042	9970127	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG01258_ch_T0000459:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9970128	9970318	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG01258_ch_T0000459;gene_id=HG01258_ch_G0000181;Parent=HG01258_ch_T0000459;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG01258_ch_T0000459:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9972842	9975638	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.2;gene_id=HG01258_ch_G0000182;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff;ID=HG01258_ch_G0000182;Name=TSPY10P
HG01258_chrY	CAT	transcript	9972842	9975638	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_G0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000460;Name=TSPY10P
HG01258_chrY	CAT	exon	9972842	9973373	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9972888	9973373	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000460:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9972888	9972890	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01258_ch_T0000460;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9973374	9973980	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000460:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9973981	9974058	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9973981	9974058	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000460:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974059	9974186	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000460:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974187	9974298	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974187	9974298	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000460:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974299	9974399	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000460:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974400	9974545	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974400	9974434	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000460:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9974432	9974434	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG01258_ch_T0000460;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974546	9974640	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000460:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974641	9974733	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974734	9975427	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000460:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9975428	9975638	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2;transcript_id=HG01258_ch_T0000460;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000460;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000460:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9972842	9975638	1000	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_G0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000461;Name=TSPY10P
HG01258_chrY	CAT	exon	9972842	9973373	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9972888	9973373	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000461:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9972888	9972890	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01258_ch_T0000461;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9973374	9973980	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000461:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9973981	9974058	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9973981	9974058	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000461:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974059	9974186	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000461:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974187	9974298	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974187	9974298	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000461:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974299	9974406	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000461:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974407	9974545	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974407	9974545	.	+	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000461:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974546	9974651	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000461:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974652	9974733	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974652	9974703	.	+	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000461:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9974701	9974703	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG01258_ch_T0000461;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974734	9975427	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000461:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9975428	9975638	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3;transcript_id=HG01258_ch_T0000461;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000461;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000461:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9972842	9975638	1000	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_G0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000462;Name=TSPY10P
HG01258_chrY	CAT	exon	9972842	9973373	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9973374	9973980	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000462:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9973981	9974058	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974059	9974186	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000462:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974187	9974298	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974299	9974406	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000462:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974407	9974545	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974546	9974640	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000462:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974641	9974733	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974734	9975427	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000462:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9975428	9975638	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4;transcript_id=HG01258_ch_T0000462;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000462;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000462:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9972842	9975638	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_G0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG01258_ch_T0000463;Name=TSPY10P
HG01258_chrY	CAT	exon	9972842	9973373	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9972888	9973373	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000463:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9972888	9972890	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG01258_ch_T0000463;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9973374	9973980	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000463:0;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9973981	9974058	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9973981	9974058	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000463:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974059	9974186	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000463:1;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974187	9974298	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974187	9974298	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000463:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974299	9974399	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000463:2;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974400	9974545	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9974400	9974434	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG01258_ch_T0000463:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9974432	9974434	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG01258_ch_T0000463;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974546	9974651	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000463:3;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9974652	9974733	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9974734	9975427	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG01258_ch_T0000463:4;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9975428	9975638	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1;transcript_id=HG01258_ch_T0000463;gene_id=HG01258_ch_G0000182;Parent=HG01258_ch_T0000463;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG01258_ch_T0000463:5;Name=TSPY10P;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9984946	9990550	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1;gene_id=HG01258_ch_G0000183;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG01258_ch_G0000183;Name=FAM197Y3
HG01258_chrY	CAT	transcript	9984946	9990550	1000	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_G0000183;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000464;Name=FAM197Y3
HG01258_chrY	CAT	exon	9984946	9985005	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000464:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9985006	9988554	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000464:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9988555	9988713	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000464:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9988714	9990216	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000464:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9990217	9990362	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000464:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9990363	9990448	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000464:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9990449	9990550	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1;transcript_id=HG01258_ch_T0000464;gene_id=HG01258_ch_G0000183;Parent=HG01258_ch_T0000464;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000464:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	9993160	9995956	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;gene_id=HG01258_ch_G0000184;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG01258_ch_G0000184;Name=TSPY10
HG01258_chrY	CAT	transcript	9993160	9995956	100	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_G0000184;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01258_ch_T0000465;Name=TSPY10
HG01258_chrY	CAT	exon	9993160	9993691	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9993206	9993691	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000465:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9993206	9993208	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000465;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9993692	9994298	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000465:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994299	9994376	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994299	9994376	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000465:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994377	9994504	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000465:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994505	9994616	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994505	9994616	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000465:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994617	9994717	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000465:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994718	9994863	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994718	9994863	.	+	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000465:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994864	9994958	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000465:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994959	9995051	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994959	9995021	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000465:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9995019	9995021	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000465;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9995052	9995745	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000465:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9995746	9995956	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000465;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000465;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000465:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9993160	9995956	100	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_G0000184;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01258_ch_T0000466;Name=TSPY10
HG01258_chrY	CAT	exon	9993160	9993691	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9993206	9993691	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000466:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9993206	9993208	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000466;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9993692	9994298	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000466:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994299	9994376	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994299	9994376	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000466:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994377	9994504	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000466:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994505	9994616	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994505	9994616	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000466:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994617	9994724	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000466:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994725	9994863	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994725	9994863	.	+	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000466:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994864	9994969	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000466:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994970	9995051	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994970	9995021	.	+	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000466:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9995019	9995021	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000466;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9995052	9995745	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000466:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9995746	9995956	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000466;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000466;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000466:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9993160	9995956	100	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_G0000184;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG01258_ch_T0000467;Name=TSPY10
HG01258_chrY	CAT	exon	9993160	9993691	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9993206	9993691	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	9993206	9993208	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG01258_ch_T0000467;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9993692	9994298	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000467:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994299	9994376	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994299	9994376	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994377	9994504	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000467:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994505	9994616	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994505	9994616	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994617	9994717	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000467:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994718	9994863	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994718	9994863	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994864	9994969	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000467:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994970	9995051	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9994970	9995051	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9995052	9995745	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG01258_ch_T0000467:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9995746	9995956	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG01258_ch_T0000467:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	9995746	9995768	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG01258_ch_T0000467:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	9995766	9995768	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000467;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000467;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG01258_ch_T0000467;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	9993160	9995956	1000	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_G0000184;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=HG01258_ch_T0000468;Name=TSPY10
HG01258_chrY	CAT	exon	9993160	9993691	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9993692	9994298	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000468:0;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994299	9994376	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994377	9994504	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000468:1;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994505	9994616	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994617	9994724	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000468:2;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994725	9994863	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9994864	9994958	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000468:3;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9994959	9995051	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	9995052	9995745	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG01258_ch_T0000468:4;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	9995746	9995956	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG01258_ch_T0000468;gene_id=HG01258_ch_G0000184;Parent=HG01258_ch_T0000468;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG01258_ch_T0000468:5;Name=TSPY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10005268	10010860	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_239.1;gene_id=HG01258_ch_G0000185;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000185;Name=FAM197Y3
HG01258_chrY	CAT	transcript	10005268	10010860	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_G0000185;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000469;Name=FAM197Y3
HG01258_chrY	CAT	exon	10005268	10005327	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000469:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10005328	10008878	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000469:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10008879	10009037	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000469:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10009038	10010526	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000469:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10010527	10010672	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000469:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10010673	10010758	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000469:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10010759	10010860	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1;transcript_id=HG01258_ch_T0000469;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000469;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000469:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	10008952	10010860	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_G0000185;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG01258_ch_T0000470;Name=FAM197Y3
HG01258_chrY	CAT	exon	10008952	10009037	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000470;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000470:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10009038	10010526	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000470;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000470:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10010527	10010672	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000470;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000470:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10010673	10010758	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000470;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG01258_ch_T0000470:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10010759	10010860	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=271.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG01258_ch_T0000470;gene_id=HG01258_ch_G0000185;Parent=HG01258_ch_T0000470;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG01258_ch_T0000470:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10013473	10016285	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=HG01258_ch_G0000186;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000186;Name=TSPY9
HG01258_chrY	CAT	transcript	10013473	10016285	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_G0000186;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG01258_ch_T0000471;Name=TSPY9
HG01258_chrY	CAT	exon	10013473	10014022	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10013519	10014022	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	10013519	10013521	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000471;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014023	10014629	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000471:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10014630	10014707	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10014630	10014707	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014708	10014835	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000471:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10014836	10014947	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10014836	10014947	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014948	10015048	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000471:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10015049	10015194	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10015049	10015194	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10015195	10015300	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000471:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10015301	10015382	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10015301	10015382	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10015383	10016074	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000471:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10016075	10016285	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000471:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10016075	10016097	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000471:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	10016095	10016097	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000471;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000471;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000471;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	10013473	10016285	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_G0000186;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG01258_ch_T0000472;Name=TSPY9
HG01258_chrY	CAT	exon	10013473	10014022	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10013519	10014022	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000472:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	10013519	10013521	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG01258_ch_T0000472;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014023	10014629	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000472:0;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10014630	10014707	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10014630	10014707	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000472:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014708	10014835	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000472:1;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10014836	10014947	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10014836	10014947	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000472:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10014948	10015048	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000472:2;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10015049	10015194	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10015049	10015194	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000472:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10015195	10015289	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000472:3;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10015290	10015382	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10015290	10015352	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG01258_ch_T0000472:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	10015350	10015352	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG01258_ch_T0000472;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10015383	10016074	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG01258_ch_T0000472:4;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10016075	10016285	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000472;gene_id=HG01258_ch_G0000186;Parent=HG01258_ch_T0000472;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG01258_ch_T0000472:5;Name=TSPY9;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10096343	10100775	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=HG01258_ch_G0000187;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG01258_ch_G0000187;Name=RBMY3AP
HG01258_chrY	CAT	transcript	10096343	10100775	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_G0000187;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG01258_ch_T0000473;Name=RBMY3AP
HG01258_chrY	CAT	exon	10096343	10096493	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_T0000473;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01258_ch_T0000473:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10096494	10100403	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_T0000473;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG01258_ch_T0000473:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10100404	10100505	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_T0000473;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01258_ch_T0000473:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10100506	10100711	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_T0000473;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG01258_ch_T0000473:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10100712	10100775	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG01258_ch_T0000473;gene_id=HG01258_ch_G0000187;Parent=HG01258_ch_T0000473;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG01258_ch_T0000473:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10176721	10179320	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=HG01258_ch_G0000188;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG01258_ch_G0000188;Name=TTTY8
HG01258_chrY	CAT	transcript	10176721	10179320	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_G0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG01258_ch_T0000474;Name=TTTY8
HG01258_chrY	CAT	exon	10176721	10176856	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_T0000474;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01258_ch_T0000474:0;Name=TTTY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10176857	10177333	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_T0000474;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG01258_ch_T0000474:0;Name=TTTY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10177334	10177538	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_T0000474;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01258_ch_T0000474:1;Name=TTTY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10177539	10179130	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_T0000474;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG01258_ch_T0000474:1;Name=TTTY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10179131	10179320	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG01258_ch_T0000474;gene_id=HG01258_ch_G0000188;Parent=HG01258_ch_T0000474;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG01258_ch_T0000474:2;Name=TTTY8;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10192445	10200883	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=HG01258_ch_G0000189;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG01258_ch_G0000189;Name=TTTY7B
HG01258_chrY	CAT	transcript	10192445	10200883	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_G0000189;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG01258_ch_T0000475;Name=TTTY7B
HG01258_chrY	CAT	exon	10192445	10192690	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:0;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10192691	10194165	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01258_ch_T0000475:0;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10194166	10194279	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:1;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10194280	10196196	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01258_ch_T0000475:1;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10196197	10196673	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:2;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10196674	10197361	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01258_ch_T0000475:2;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10197362	10197436	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:3;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10197437	10199743	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01258_ch_T0000475:3;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10199744	10199905	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:4;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10199906	10200846	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG01258_ch_T0000475:4;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10200847	10200883	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG01258_ch_T0000475;gene_id=HG01258_ch_G0000189;Parent=HG01258_ch_T0000475;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG01258_ch_T0000475:5;Name=TTTY7B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10203274	10206917	.	-	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=HG01258_ch_G0000190;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG01258_ch_G0000190;Name=TTTY21B
HG01258_chrY	CAT	transcript	10203274	10206917	1000	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01258_ch_T0000476;gene_id=HG01258_ch_G0000190;Parent=HG01258_ch_G0000190;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG01258_ch_T0000476;Name=TTTY21B
HG01258_chrY	CAT	exon	10203274	10203378	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01258_ch_T0000476;gene_id=HG01258_ch_G0000190;Parent=HG01258_ch_T0000476;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG01258_ch_T0000476:0;Name=TTTY21B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10203379	10206715	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01258_ch_T0000476;gene_id=HG01258_ch_G0000190;Parent=HG01258_ch_T0000476;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG01258_ch_T0000476:0;Name=TTTY21B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10206716	10206917	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG01258_ch_T0000476;gene_id=HG01258_ch_G0000190;Parent=HG01258_ch_T0000476;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG01258_ch_T0000476:1;Name=TTTY21B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10221907	10244108	.	+	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=HG01258_ch_G0000191;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG01258_ch_G0000191;Name=TTTY2
HG01258_chrY	CAT	transcript	10221907	10244108	1000	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_G0000191;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG01258_ch_T0000477;Name=TTTY2
HG01258_chrY	CAT	exon	10221907	10222111	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:0;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10222112	10227945	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:0;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10227946	10228023	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:1;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10228024	10230499	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:1;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10230500	10230586	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:2;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10230587	10237980	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:2;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10237981	10238129	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:3;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10238130	10238821	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:3;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10238822	10238978	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:4;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10238979	10241808	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:4;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10241809	10241887	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:5;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10241888	10242007	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:5;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10242008	10242205	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:6;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10242206	10243428	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG01258_ch_T0000477:6;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10243429	10244108	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG01258_ch_T0000477;gene_id=HG01258_ch_G0000191;Parent=HG01258_ch_T0000477;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG01258_ch_T0000477:7;Name=TTTY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10238788	10259953	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=HG01258_ch_G0000192;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG01258_ch_G0000192;Name=TTTY1B
HG01258_chrY	CAT	transcript	10238788	10259953	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_G0000192;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG01258_ch_T0000478;Name=TTTY1B
HG01258_chrY	CAT	exon	10238788	10239045	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01258_ch_T0000478:0;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10239046	10246626	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01258_ch_T0000478:0;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10246627	10246764	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01258_ch_T0000478:1;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10246765	10249120	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01258_ch_T0000478:1;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10249121	10249229	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01258_ch_T0000478:2;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10249230	10256094	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01258_ch_T0000478:2;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10256095	10256254	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01258_ch_T0000478:3;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10256255	10259678	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG01258_ch_T0000478:3;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10259679	10259953	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG01258_ch_T0000478;gene_id=HG01258_ch_G0000192;Parent=HG01258_ch_T0000478;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG01258_ch_T0000478:4;Name=TTTY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10280434	10283845	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;gene_id=HG01258_ch_G0000193;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG01258_ch_G0000193;Name=LOC107987353
HG01258_chrY	CAT	transcript	10280434	10283845	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_G0000193;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG01258_ch_T0000479;Name=LOC107987353
HG01258_chrY	CAT	exon	10280434	10280602	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_T0000479;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01258_ch_T0000479:0;Name=LOC107987353;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10280603	10280978	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_T0000479;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG01258_ch_T0000479:0;Name=LOC107987353;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10280979	10281051	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_T0000479;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01258_ch_T0000479:1;Name=LOC107987353;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10281052	10283582	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_T0000479;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG01258_ch_T0000479:1;Name=LOC107987353;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10283583	10283845	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG01258_ch_T0000479;gene_id=HG01258_ch_G0000193;Parent=HG01258_ch_T0000479;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG01258_ch_T0000479:2;Name=LOC107987353;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10288949	10293155	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=HG01258_ch_G0000194;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG01258_ch_G0000194;Name=LINC00280
HG01258_chrY	CAT	transcript	10288949	10293155	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_G0000194;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG01258_ch_T0000480;Name=LINC00280
HG01258_chrY	CAT	exon	10288949	10289034	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_T0000480;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000480:0;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10289035	10291535	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_T0000480;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG01258_ch_T0000480:0;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10291536	10291678	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_T0000480;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000480:1;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10291679	10292936	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_T0000480;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG01258_ch_T0000480:1;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10292937	10293155	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG01258_ch_T0000480;gene_id=HG01258_ch_G0000194;Parent=HG01258_ch_T0000480;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG01258_ch_T0000480:2;Name=LINC00280;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10386439	10392042	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;gene_id=HG01258_ch_G0000195;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG01258_ch_G0000195;Name=FAM197Y9
HG01258_chrY	CAT	transcript	10386439	10392042	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_G0000195;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG01258_ch_T0000481;Name=FAM197Y9
HG01258_chrY	CAT	exon	10386439	10386540	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01258_ch_T0000481:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10386541	10386626	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01258_ch_T0000481:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10386627	10386772	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01258_ch_T0000481:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10386773	10388272	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01258_ch_T0000481:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10388273	10388431	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01258_ch_T0000481:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10388432	10391982	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG01258_ch_T0000481:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10391983	10392042	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG01258_ch_T0000481;gene_id=HG01258_ch_G0000195;Parent=HG01258_ch_T0000481;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG01258_ch_T0000481:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10401357	10404152	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;gene_id=HG01258_ch_G0000196;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000196;Name=TSPY2
HG01258_chrY	CAT	transcript	10401357	10404152	100	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_G0000196;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01258_ch_T0000482;Name=TSPY2
HG01258_chrY	CAT	exon	10401357	10401572	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10401550	10401572	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	10401550	10401552	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01258_ch_T0000482;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10401573	10402266	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000482:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402267	10402348	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402267	10402348	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402349	10402454	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000482:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402455	10402600	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402455	10402600	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402601	10402701	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000482:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402702	10402813	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402702	10402813	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402814	10402941	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000482:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402942	10403019	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402942	10403019	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10403020	10403620	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000482:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10403621	10404152	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000482:5;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10403621	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000482:5;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	10404104	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000482;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000482;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01258_ch_T0000482;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	10401357	10404152	100	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_G0000196;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01258_ch_T0000483;Name=TSPY2
HG01258_chrY	CAT	exon	10401357	10401572	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10401573	10402266	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000483:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402267	10402359	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402297	10402359	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000483:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	10402297	10402299	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01258_ch_T0000483;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402360	10402454	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000483:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402455	10402600	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402455	10402600	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000483:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402601	10402701	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000483:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402702	10402813	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402702	10402813	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000483:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402814	10402941	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000483:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402942	10403019	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402942	10403019	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000483:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10403020	10403620	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000483:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10403621	10404152	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000483:5;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10403621	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000483:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	10404104	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000483;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000483;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01258_ch_T0000483;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	10401357	10404152	100	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_G0000196;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG01258_ch_T0000484;Name=TSPY2
HG01258_chrY	CAT	exon	10401357	10401572	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10401573	10402266	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000484:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402267	10402348	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402297	10402348	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000484:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	10402297	10402299	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG01258_ch_T0000484;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402349	10402454	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000484:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402455	10402593	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402455	10402593	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000484:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402594	10402701	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000484:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402702	10402813	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402702	10402813	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000484:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402814	10402941	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000484:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402942	10403019	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10402942	10403019	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000484:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10403020	10403620	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG01258_ch_T0000484:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10403621	10404152	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG01258_ch_T0000484:5;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	10403621	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG01258_ch_T0000484:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	10404104	10404106	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000484;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000484;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG01258_ch_T0000484;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	10401357	10404152	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_G0000196;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG01258_ch_T0000485;Name=TSPY2
HG01258_chrY	CAT	exon	10401357	10401572	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10401573	10402266	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01258_ch_T0000485:0;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402267	10402359	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402360	10402454	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01258_ch_T0000485:1;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402455	10402593	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402594	10402701	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01258_ch_T0000485:2;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402702	10402813	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10402814	10402941	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01258_ch_T0000485:3;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10402942	10403019	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10403020	10403620	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG01258_ch_T0000485:4;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10403621	10404152	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000485;gene_id=HG01258_ch_G0000196;Parent=HG01258_ch_T0000485;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG01258_ch_T0000485:5;Name=TSPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	10406756	10407920	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=HG01258_ch_G0000197;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG01258_ch_G0000197;Name=TTTY23B
HG01258_chrY	CAT	transcript	10406756	10407920	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_G0000197;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG01258_ch_T0000486;Name=TTTY23B
HG01258_chrY	CAT	exon	10406756	10406812	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_T0000486;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01258_ch_T0000486:0;Name=TTTY23B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10406813	10406925	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_T0000486;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG01258_ch_T0000486:0;Name=TTTY23B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10406926	10407071	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_T0000486;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01258_ch_T0000486:1;Name=TTTY23B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	10407072	10407611	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_T0000486;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG01258_ch_T0000486:1;Name=TTTY23B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	10407612	10407920	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG01258_ch_T0000486;gene_id=HG01258_ch_G0000197;Parent=HG01258_ch_T0000486;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG01258_ch_T0000486:2;Name=TTTY23B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	11940963	11943977	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG01258_ch_G0000198;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG01258_ch_G0000198;Name=LOC124904996
HG01258_chrY	CAT	transcript	11940963	11943977	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01258_ch_T0000487;gene_id=HG01258_ch_G0000198;Parent=HG01258_ch_G0000198;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG01258_ch_T0000487;Name=LOC124904996
HG01258_chrY	CAT	exon	11940963	11942228	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01258_ch_T0000487;gene_id=HG01258_ch_G0000198;Parent=HG01258_ch_T0000487;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG01258_ch_T0000487:0;Name=LOC124904996;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	11942229	11943555	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01258_ch_T0000487;gene_id=HG01258_ch_G0000198;Parent=HG01258_ch_T0000487;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG01258_ch_T0000487:0;Name=LOC124904996;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	11943556	11943977	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG01258_ch_T0000487;gene_id=HG01258_ch_G0000198;Parent=HG01258_ch_T0000487;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG01258_ch_T0000487:1;Name=LOC124904996;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	12026507	12034864	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG01258_ch_G0000199;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG01258_ch_G0000199;Name=LOC105379273
HG01258_chrY	CAT	transcript	12026507	12034864	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_G0000199;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG01258_ch_T0000488;Name=LOC105379273
HG01258_chrY	CAT	exon	12026507	12026548	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_T0000488;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01258_ch_T0000488:0;Name=LOC105379273;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	12026549	12032610	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_T0000488;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG01258_ch_T0000488:0;Name=LOC105379273;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	12032611	12032669	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_T0000488;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01258_ch_T0000488:1;Name=LOC105379273;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	12032670	12034804	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_T0000488;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG01258_ch_T0000488:1;Name=LOC105379273;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	12034805	12034864	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG01258_ch_T0000488;gene_id=HG01258_ch_G0000199;Parent=HG01258_ch_T0000488;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG01258_ch_T0000488:2;Name=LOC105379273;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	13775092	13784026	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG01258_ch_G0000200;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG01258_ch_G0000200;Name=LOC107987343
HG01258_chrY	CAT	transcript	13775092	13784026	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_G0000200;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG01258_ch_T0000489;Name=LOC107987343
HG01258_chrY	CAT	exon	13775092	13776484	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_T0000489;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01258_ch_T0000489:0;Name=LOC107987343;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13776485	13779046	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_T0000489;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG01258_ch_T0000489:0;Name=LOC107987343;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13779047	13779173	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_T0000489;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01258_ch_T0000489:1;Name=LOC107987343;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13779174	13782130	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_T0000489;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG01258_ch_T0000489:1;Name=LOC107987343;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13782131	13784026	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG01258_ch_T0000489;gene_id=HG01258_ch_G0000200;Parent=HG01258_ch_T0000489;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG01258_ch_T0000489:2;Name=LOC107987343;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	13826626	13842100	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG01258_ch_G0000201;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG01258_ch_G0000201;Name=GYG2P1
HG01258_chrY	CAT	transcript	13826626	13842100	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_G0000201;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG01258_ch_T0000490;Name=GYG2P1
HG01258_chrY	CAT	exon	13826626	13827010	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01258_ch_T0000490:0;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13827011	13827305	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01258_ch_T0000490:0;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13827306	13827447	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01258_ch_T0000490:1;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13827448	13827702	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01258_ch_T0000490:1;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13827703	13827819	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01258_ch_T0000490:2;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13827820	13840825	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01258_ch_T0000490:2;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13840826	13840964	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01258_ch_T0000490:3;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	13840965	13842059	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG01258_ch_T0000490:3;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	13842060	13842100	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG01258_ch_T0000490;gene_id=HG01258_ch_G0000201;Parent=HG01258_ch_T0000490;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG01258_ch_T0000490:4;Name=GYG2P1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14082492	14084659	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG01258_ch_G0000202;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG01258_ch_G0000202;Name=LOC112268311
HG01258_chrY	CAT	transcript	14082492	14084659	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01258_ch_T0000491;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_G0000202;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG01258_ch_T0000491;Name=LOC112268311
HG01258_chrY	CAT	exon	14082492	14083927	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01258_ch_T0000491;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000491;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01258_ch_T0000491:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083928	14084536	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01258_ch_T0000491;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000491;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG01258_ch_T0000491:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14084537	14084659	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG01258_ch_T0000491;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000491;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01258_ch_T0000491:1;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14082492	14084668	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01258_ch_T0000492;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_G0000202;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG01258_ch_T0000492;Name=LOC112268311
HG01258_chrY	CAT	exon	14082492	14083927	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01258_ch_T0000492;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000492;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01258_ch_T0000492:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083928	14084479	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01258_ch_T0000492;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000492;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG01258_ch_T0000492:0;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14084480	14084668	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG01258_ch_T0000492;gene_id=HG01258_ch_G0000202;Parent=HG01258_ch_T0000492;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG01258_ch_T0000492:1;Name=LOC112268311;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14083528	14113407	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG01258_ch_G0000203;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG01258_ch_G0000203;Name=TTTY15
HG01258_chrY	CAT	transcript	14083528	14113407	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_G0000203;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01258_ch_T0000493;Name=TTTY15
HG01258_chrY	CAT	exon	14083528	14083882	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000493:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083883	14085815	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000493:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14085816	14085862	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000493:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14085863	14107686	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000493:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14107687	14107780	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000493:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14107781	14108637	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000493:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14108638	14113407	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG01258_ch_T0000493;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000493;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000493:3;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14083528	14113407	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_G0000203;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01258_ch_T0000494;Name=TTTY15
HG01258_chrY	CAT	exon	14083528	14083882	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000494;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000494:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083883	14107686	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000494;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000494:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14107687	14107780	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000494;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000494:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14107781	14108637	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000494;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000494:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14108638	14113407	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG01258_ch_T0000494;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000494;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000494:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14083528	14113407	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_G0000203;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01258_ch_T0000495;Name=TTTY15
HG01258_chrY	CAT	exon	14083528	14083882	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000495;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000495:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083883	14107686	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000495;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000495:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14107687	14107780	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000495;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000495:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14107781	14108858	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000495;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000495:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14108859	14113407	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG01258_ch_T0000495;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000495;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000495:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14083528	14113407	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_G0000203;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01258_ch_T0000496;Name=TTTY15
HG01258_chrY	CAT	exon	14083528	14083882	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000496:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083883	14085815	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000496:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14085816	14085862	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000496:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14085863	14107686	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000496:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14107687	14107780	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000496:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14107781	14108858	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000496:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14108859	14113407	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG01258_ch_T0000496;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000496;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000496:3;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14083528	14113407	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_G0000203;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG01258_ch_T0000497;Name=TTTY15
HG01258_chrY	CAT	exon	14083528	14083882	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000497:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14083883	14085815	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000497:0;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14085816	14085862	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000497:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14085863	14107686	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000497:1;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14107687	14107780	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000497:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14107781	14111499	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG01258_ch_T0000497:2;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14111500	14113407	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG01258_ch_T0000497;gene_id=HG01258_ch_G0000203;Parent=HG01258_ch_T0000497;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG01258_ch_T0000497:3;Name=TTTY15;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14122405	14281982	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG01258_ch_G0000204;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000204;Name=USP9Y
HG01258_chrY	CAT	transcript	14122405	14281982	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_G0000204;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01258_ch_T0000498;Name=USP9Y
HG01258_chrY	CAT	exon	14122405	14123229	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14123230	14129811	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14129812	14129871	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14129872	14130565	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14130566	14130721	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14130626	14130721	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	14130626	14130628	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01258_ch_T0000498;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14130722	14141767	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14141768	14141916	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14141768	14141916	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14141917	14143285	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14143286	14143365	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14143286	14143365	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14143366	14146290	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14146291	14146403	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14146291	14146403	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14146404	14147752	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14147753	14147971	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14147753	14147971	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14147972	14156789	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14156790	14156905	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14156790	14156905	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14156906	14157175	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157176	14157427	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157176	14157427	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157428	14157588	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157589	14157727	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157589	14157727	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157728	14159334	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14159335	14159487	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14159335	14159487	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14159488	14160702	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14160703	14160807	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14160703	14160807	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14160808	14178369	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14178370	14178576	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14178370	14178576	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14178577	14179683	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14179684	14179820	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14179684	14179820	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14179821	14181661	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14181662	14181795	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14181662	14181795	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14181796	14192246	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14192247	14192334	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14192247	14192334	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14192335	14194761	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14194762	14195104	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14194762	14195104	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14195105	14196649	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14196650	14196745	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14196650	14196745	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14196746	14197827	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14197828	14198039	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14197828	14198039	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14198040	14199197	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199198	14199438	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199198	14199438	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199439	14199784	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199785	14199934	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199785	14199934	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199935	14200704	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14200705	14200825	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14200705	14200825	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14200826	14207381	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207382	14207512	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207382	14207512	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207513	14207699	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207700	14207978	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207700	14207978	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207979	14211584	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14211585	14211710	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14211585	14211710	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14211711	14212676	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14212677	14212802	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14212677	14212802	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14212803	14214209	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14214210	14214379	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14214210	14214379	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14214380	14231331	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231332	14231440	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231332	14231440	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231441	14231824	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231825	14231971	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231825	14231971	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231972	14232787	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14232788	14232934	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14232788	14232934	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14232935	14233982	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14233983	14234205	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14233983	14234205	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14234206	14237276	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14237277	14237497	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14237277	14237497	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14237498	14239572	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14239573	14239763	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14239573	14239763	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14239764	14254832	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14254833	14255006	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14254833	14255006	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14255007	14259055	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14259056	14259197	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14259056	14259197	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14259198	14261008	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14261009	14261759	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14261009	14261759	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14261760	14262154	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14262155	14262278	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14262155	14262278	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14262279	14263382	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14263383	14263608	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14263383	14263608	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14263609	14264206	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14264207	14264336	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14264207	14264336	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14264337	14267475	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14267476	14267661	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14267476	14267661	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14267662	14268075	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268076	14268296	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268076	14268296	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268297	14268381	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268382	14268470	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268382	14268470	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268471	14277482	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277483	14277639	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277483	14277639	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277640	14277775	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277776	14277988	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277776	14277988	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277989	14278708	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14278709	14278804	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:44;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14278709	14278804	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14278805	14280421	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000498:44;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14280422	14281982	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000498:45;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14280422	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000498:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	14280557	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000498;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000498;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01258_ch_T0000498;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14129031	14281982	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_G0000204;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01258_ch_T0000499;Name=USP9Y
HG01258_chrY	CAT	exon	14129031	14129059	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14129060	14129811	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14129812	14129871	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14129872	14130565	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14130566	14130721	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14130626	14130721	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	14130626	14130628	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01258_ch_T0000499;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14130722	14141767	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14141768	14141916	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14141768	14141916	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14141917	14143285	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14143286	14143365	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14143286	14143365	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14143366	14146290	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14146291	14146403	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14146291	14146403	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14146404	14147752	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14147753	14147971	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14147753	14147971	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14147972	14156789	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14156790	14156905	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14156790	14156905	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14156906	14157175	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157176	14157427	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157176	14157427	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157428	14157588	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157589	14157727	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157589	14157727	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157728	14159334	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14159335	14159487	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14159335	14159487	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14159488	14160702	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14160703	14160807	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14160703	14160807	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14160808	14178369	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14178370	14178576	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14178370	14178576	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14178577	14179683	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14179684	14179820	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14179684	14179820	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14179821	14181661	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14181662	14181795	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14181662	14181795	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14181796	14192246	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14192247	14192334	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14192247	14192334	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14192335	14194761	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14194762	14195104	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14194762	14195104	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14195105	14196649	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14196650	14196745	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14196650	14196745	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14196746	14197827	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14197828	14198039	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14197828	14198039	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14198040	14199197	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199198	14199438	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199198	14199438	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199439	14199784	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199785	14199934	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199785	14199934	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199935	14200704	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14200705	14200825	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14200705	14200825	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14200826	14207381	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207382	14207512	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207382	14207512	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207513	14207699	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207700	14207978	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207700	14207978	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207979	14211584	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14211585	14211710	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14211585	14211710	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14211711	14212676	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14212677	14212802	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14212677	14212802	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14212803	14214209	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14214210	14214379	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14214210	14214379	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14214380	14231331	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231332	14231440	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231332	14231440	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231441	14231824	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231825	14231971	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231825	14231971	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231972	14232787	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14232788	14232934	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14232788	14232934	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14232935	14233982	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14233983	14234205	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14233983	14234205	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14234206	14237276	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14237277	14237497	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14237277	14237497	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14237498	14239572	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14239573	14239763	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14239573	14239763	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14239764	14254832	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14254833	14255006	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14254833	14255006	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14255007	14259055	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14259056	14259197	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14259056	14259197	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14259198	14261008	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14261009	14261759	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14261009	14261759	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14261760	14262154	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14262155	14262278	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14262155	14262278	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14262279	14263382	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14263383	14263608	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14263383	14263608	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14263609	14264206	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14264207	14264336	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14264207	14264336	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14264337	14267475	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14267476	14267661	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14267476	14267661	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14267662	14268075	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268076	14268296	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268076	14268296	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268297	14268381	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268382	14268470	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268382	14268470	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268471	14277482	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277483	14277639	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277483	14277639	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277640	14277775	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277776	14277988	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277776	14277988	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277989	14278708	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14278709	14278804	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:44;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14278709	14278804	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14278805	14280421	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000499:44;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14280422	14281982	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000499:45;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14280422	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000499:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	14280557	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000499;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000499;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01258_ch_T0000499;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14130634	14281982	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_G0000204;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG01258_ch_T0000500;Name=USP9Y
HG01258_chrY	CAT	exon	14130634	14130721	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14130722	14135817	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14135818	14135968	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14135969	14141767	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14141768	14141916	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14141906	14141916	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:0;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	14141906	14141908	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG01258_ch_T0000500;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14141917	14143285	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14143286	14143365	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14143286	14143365	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:1;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14143366	14146290	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14146291	14146403	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14146291	14146403	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:2;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14146404	14147752	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14147753	14147971	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14147753	14147971	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:3;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14147972	14156789	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14156790	14156905	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14156790	14156905	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:4;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14156906	14157175	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157176	14157427	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157176	14157427	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:5;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157428	14157588	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14157589	14157727	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14157589	14157727	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:6;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14157728	14159334	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14159335	14159487	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14159335	14159487	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:7;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14159488	14160702	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14160703	14160807	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14160703	14160807	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:8;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14160808	14178369	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14178370	14178576	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14178370	14178576	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:9;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14178577	14179683	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14179684	14179820	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14179684	14179820	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:10;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14179821	14181661	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14181662	14181795	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14181662	14181795	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:11;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14181796	14192246	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14192247	14192334	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14192247	14192334	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:12;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14192335	14194761	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14194762	14195104	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14194762	14195104	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:13;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14195105	14196649	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14196650	14196745	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14196650	14196745	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:14;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14196746	14197827	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14197828	14198039	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14197828	14198039	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:15;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14198040	14199197	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199198	14199438	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199198	14199438	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:16;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199439	14199784	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14199785	14199934	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14199785	14199934	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:17;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14199935	14200704	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14200705	14200825	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14200705	14200825	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:18;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14200826	14207381	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207382	14207512	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207382	14207512	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:19;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207513	14207699	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14207700	14207978	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14207700	14207978	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:20;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14207979	14211584	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14211585	14211710	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14211585	14211710	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:21;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14211711	14212676	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14212677	14212802	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14212677	14212802	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:22;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14212803	14214209	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14214210	14214379	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14214210	14214379	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:23;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14214380	14231331	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231332	14231440	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231332	14231440	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:24;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231441	14231824	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14231825	14231971	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14231825	14231971	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:25;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14231972	14232787	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14232788	14232934	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14232788	14232934	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:26;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14232935	14233982	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14233983	14234205	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14233983	14234205	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:27;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14234206	14237276	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14237277	14237497	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14237277	14237497	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:28;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14237498	14239572	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14239573	14239763	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14239573	14239763	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:29;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14239764	14254832	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14254833	14255006	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14254833	14255006	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:30;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14255007	14259055	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14259056	14259197	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14259056	14259197	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:31;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14259198	14261008	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14261009	14261759	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14261009	14261759	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:32;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14261760	14262154	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14262155	14262278	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14262155	14262278	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:33;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14262279	14263382	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14263383	14263608	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14263383	14263608	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:34;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14263609	14264206	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14264207	14264336	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14264207	14264336	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:35;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14264337	14267475	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14267476	14267661	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14267476	14267661	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:36;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14267662	14268075	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268076	14268296	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268076	14268296	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:37;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268297	14268381	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14268382	14268470	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14268382	14268470	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:38;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14268471	14277482	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277483	14277639	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277483	14277639	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:39;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277640	14277775	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14277776	14277988	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14277776	14277988	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:40;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14277989	14278708	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14278709	14278804	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14278709	14278804	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:41;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14278805	14280421	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG01258_ch_T0000500:43;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14280422	14281982	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG01258_ch_T0000500:44;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14280422	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG01258_ch_T0000500:42;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	14280557	14280559	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000500;gene_id=HG01258_ch_G0000204;Parent=HG01258_ch_T0000500;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG01258_ch_T0000500;Name=USP9Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14326006	14341616	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;gene_id=HG01258_ch_G0000205;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG01258_ch_G0000205;Name=DDX3Y
HG01258_chrY	CAT	transcript	14326006	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000501;Name=DDX3Y
HG01258_chrY	CAT	exon	14326006	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326120	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000501:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000501;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000501;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000501:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326006	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000502;Name=DDX3Y
HG01258_chrY	CAT	exon	14326006	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326120	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14335787	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14335788	14336021	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336022	14336120	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336121	14336204	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336205	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000502:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000502;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000502;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000502:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326006	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000503;Name=DDX3Y
HG01258_chrY	CAT	exon	14326006	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326120	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000503:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000503;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000503;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000503:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326006	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000504;Name=DDX3Y
HG01258_chrY	CAT	exon	14326006	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326120	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338113	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338114	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000504:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000504;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000504;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000504:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326006	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000505;Name=DDX3Y
HG01258_chrY	CAT	exon	14326006	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326120	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14335787	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14335788	14336021	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336022	14336120	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336121	14336221	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336222	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000505:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000505;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000505;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000505:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326843	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000506;Name=DDX3Y
HG01258_chrY	CAT	exon	14326843	14326953	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326954	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14335787	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14335788	14336021	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336022	14336120	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336121	14336204	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336205	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000506:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000506;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000506;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000506:14;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14326843	14341616	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG01258_ch_T0000507;Name=DDX3Y
HG01258_chrY	CAT	exon	14326843	14326953	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14326954	14328674	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14328675	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14332976	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14332977	14333106	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14333107	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000507:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000507;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000507;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000507:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14328707	14341616	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_G0000205;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG01258_ch_T0000508;Name=DDX3Y
HG01258_chrY	CAT	exon	14328707	14328732	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14328733	14330497	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14330498	14330545	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14330546	14333864	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14333865	14334200	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334201	14334855	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14334856	14334991	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14334871	14334991	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:0;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	14334871	14334873	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG01258_ch_T0000508;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14334992	14335701	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14335702	14335787	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14335702	14335787	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:1;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14335788	14336021	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336022	14336120	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14336022	14336120	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:2;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336121	14336204	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336205	14336365	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14336205	14336365	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:3;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336366	14336767	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14336768	14336912	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14336768	14336912	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:4;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14336913	14337020	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337021	14337165	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14337021	14337165	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:5;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337166	14337398	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337399	14337580	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14337399	14337580	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:6;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337581	14337654	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14337655	14337772	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14337655	14337772	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:7;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14337773	14338044	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338045	14338198	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14338045	14338198	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:8;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338199	14338540	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:11;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14338541	14338680	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14338541	14338680	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:9;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14338681	14339180	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG01258_ch_T0000508:12;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14339181	14341616	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG01258_ch_T0000508:13;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	14339181	14339260	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG01258_ch_T0000508:10;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	14339258	14339260	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000508;gene_id=HG01258_ch_G0000205;Parent=HG01258_ch_T0000508;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG01258_ch_T0000508;Name=DDX3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14532462	14545214	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;gene_id=HG01258_ch_G0000206;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG01258_ch_G0000206;Name=LOC112268312
HG01258_chrY	CAT	transcript	14532462	14540023	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_G0000206;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01258_ch_T0000509;Name=LOC112268312
HG01258_chrY	CAT	exon	14532462	14532550	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000509;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000509:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532551	14532736	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000509;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000509:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14532737	14532899	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000509;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000509:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532900	14538824	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000509;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000509:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14538825	14540023	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1,hg002_chrY_paternal_318.1;transcript_id=HG01258_ch_T0000509;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000509;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000509:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14532462	14545214	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_G0000206;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01258_ch_T0000510;Name=LOC112268312
HG01258_chrY	CAT	exon	14532462	14532550	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000510:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532551	14532736	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000510:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14532737	14532899	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000510:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532900	14538824	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000510:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14538825	14538960	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000510:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14538961	14544847	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000510:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14544848	14545214	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2,hg002_chrY_paternal_318.2;transcript_id=HG01258_ch_T0000510;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000510;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000510:3;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14532584	14540023	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_G0000206;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG01258_ch_T0000511;Name=LOC112268312
HG01258_chrY	CAT	exon	14532584	14532602	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000511;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000511:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532603	14532736	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000511;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000511:0;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14532737	14532899	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000511;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000511:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14532900	14538824	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000511;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG01258_ch_T0000511:1;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14538825	14540023	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3,hg002_chrY_paternal_318.3;transcript_id=HG01258_ch_T0000511;gene_id=HG01258_ch_G0000206;Parent=HG01258_ch_T0000511;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG01258_ch_T0000511:2;Name=LOC112268312;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14653464	14900248	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG01258_ch_G0000207;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG01258_ch_G0000207;Name=UTY
HG01258_chrY	CAT	transcript	14653464	14899611	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000512;Name=UTY
HG01258_chrY	CAT	exon	14653464	14654395	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14654396	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000512:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14899611	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000512;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000512;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000512:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000513;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000513:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000513;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000513;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000513:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000514;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000514:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000514;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000514;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000514:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000515;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725220	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725221	14725288	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725289	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788827	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788828	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000515:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000515;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000515;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000515:29;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000516;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14753784	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14753785	14753907	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14753908	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000516:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000516;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000516;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000516:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000517;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14775095	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775096	14775204	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775205	14775270	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775271	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000517:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000517;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000517;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000517:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000518;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755367	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755368	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000518:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000518;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000518;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000518:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000519;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000519:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000519;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000519;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000519:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000520;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14895480	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14895481	14895603	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14895604	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000520:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000520;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000520;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000520:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000521;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755367	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755368	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000521:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000521;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000521;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000521:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000522;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14697808	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14697809	14697913	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14697914	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780047	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780048	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000522:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000522;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000522;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000522:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000523;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14777877	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777878	14778013	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778014	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000523:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000523;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000523;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000523:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000524;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14777877	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777878	14778088	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778089	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000524:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000524;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000524;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000524:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000525;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725220	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725221	14725288	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725289	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780047	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780048	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000525:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000525;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000525;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000525:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000526;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14775095	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775096	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000526:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000526;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000526;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000526:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000527;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725220	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725221	14725288	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725289	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000527:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000527;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000527;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000527:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000528;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000528:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000528;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000528;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000528:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000529;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000529:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000529;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000529;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000529:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000530;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000530:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000530;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000530;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000530:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000531;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719568	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719569	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778120	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778121	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14819506	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14819507	14819620	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14819621	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000531:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000531;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000531;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000531:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000532;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719568	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719569	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778088	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778089	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000532:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000532;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000532;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000532:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000533;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725053	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725054	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14819506	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14819507	14819620	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14819621	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000533:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000533;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000533;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000533:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000534;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14723749	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14723750	14723778	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14723779	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745909	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745910	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000534:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000534;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000534;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000534:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000535;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719544	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719545	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774659	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774660	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:29;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000535:29;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000535;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000535;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000535:30;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000536;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778088	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778089	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000536:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000536;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000536;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000536:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000537;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000537:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000537;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000537;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000537:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000538;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745909	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745910	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000538:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000538;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000538;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000538:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000539;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000539:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000539;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000539;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000539:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000540;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719568	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719569	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000540:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000540;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000540;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000540:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000541;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14819506	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14819507	14819620	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14819621	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000541:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000541;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000541;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000541:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000542;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000542:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000542;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000542;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000542:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000543;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000543:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000543;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000543;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000543:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000544;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755367	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755368	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000544:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000544;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000544;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000544:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000545;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774352	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774353	14774400	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774401	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000545:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000545;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000545;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000545:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000546;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14742668	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14742669	14742935	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14742936	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000546:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000546;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000546;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000546:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000547;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719544	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719545	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000547:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000547;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000547;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000547:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000548;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719568	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719569	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14859256	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14859257	14859336	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14859337	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000548:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000548;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000548;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000548:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000549;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774941	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774942	14775095	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775096	14775204	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775205	14775270	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775271	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778120	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778121	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000549:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000549;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000549;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000549:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000550;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745909	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745910	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000550:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000550;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000550;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000550:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000551;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788827	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788828	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000551:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000551;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000551;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000551:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000552;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774352	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774353	14774400	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774401	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778120	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778121	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000552:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000552;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000552;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000552:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000553;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670569	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670570	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778088	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778089	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000553:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000553;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000553;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000553:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000554;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788827	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788828	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000554:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000554;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000554;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000554:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000555;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000555:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000555;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000555;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000555:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000556;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745909	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745910	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000556:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000556;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000556;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000556:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000557;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725220	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725221	14725288	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725289	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000557:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000557;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000557;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000557:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000558;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14697808	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14697809	14697913	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14697914	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000558:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000558;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000558;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000558:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000559;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755367	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755368	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000559:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000559;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000559;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000559:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000560;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778088	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778089	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000560:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000560;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000560;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000560:28;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000561;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14823350	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14823351	14823456	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14823457	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000561:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000561;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000561;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000561:27;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000562;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000562:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000562;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000562;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000562:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14667947	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000563;Name=UTY
HG01258_chrY	CAT	exon	14667947	14669450	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14669451	14670584	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14670585	14670755	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14670756	14679845	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14679846	14679972	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14679973	14717274	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14717275	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779510	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779511	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000563:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000563;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000563;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000563:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14717077	14899611	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000564;Name=UTY
HG01258_chrY	CAT	exon	14717077	14717416	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14717417	14718524	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14718525	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719544	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719545	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000564:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14899611	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000564;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000564;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000564:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14718658	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000565;Name=UTY
HG01258_chrY	CAT	exon	14718658	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719544	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719545	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774352	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774353	14774400	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774401	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000565:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000565;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000565;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000565:26;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14718694	14900248	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_G0000207;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG01258_ch_T0000566;Name=UTY
HG01258_chrY	CAT	exon	14718694	14718712	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14718713	14719544	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:0;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14719545	14719636	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14719637	14722444	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:1;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14722445	14722559	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14722560	14724966	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:2;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14724967	14725115	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725116	14725605	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:3;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14725606	14725818	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14725819	14743121	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:4;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14743122	14743327	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14743328	14744167	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:5;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14744168	14744273	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14744274	14745787	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:6;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14745788	14745917	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14745918	14755129	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:7;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14755130	14755902	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14755903	14774569	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:8;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14774570	14774965	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14774966	14775489	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:9;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14775490	14775585	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14775586	14777443	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:10;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14777444	14777536	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14777537	14778030	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:11;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778031	14778186	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778187	14778654	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:12;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14778655	14778789	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14778790	14779333	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:13;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779334	14779553	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14779554	14779996	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:14;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14779997	14780095	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14780096	14785833	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:15;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14785834	14785960	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14785961	14788822	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:16;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14788823	14788916	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14788917	14813427	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:17;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14813428	14813462	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14813463	14816486	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:18;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14816487	14816541	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14816542	14830560	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:19;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14830561	14830681	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14830682	14834302	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:20;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14834303	14834361	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14834362	14868594	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:21;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14868595	14868644	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14868645	14889698	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:22;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14889699	14889807	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14889808	14898831	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:23;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14898832	14898895	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	14898896	14899091	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG01258_ch_T0000566:24;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	14899092	14900248	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG01258_ch_T0000566;gene_id=HG01258_ch_G0000207;Parent=HG01258_ch_T0000566;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG01258_ch_T0000566:25;Name=UTY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	14898755	14898792	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG01258_ch_G0000208;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG01258_ch_G0000208;Name=MIR12120
HG01258_chrY	CAT	transcript	14898755	14898844	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG01258_ch_T0000567;gene_id=HG01258_ch_G0000208;Parent=HG01258_ch_G0000208;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG01258_ch_T0000567;Name=MIR12120
HG01258_chrY	CAT	exon	14898755	14898844	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG01258_ch_T0000567;gene_id=HG01258_ch_G0000208;Parent=HG01258_ch_T0000567;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG01258_ch_T0000567:0;Name=MIR12120;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	14898767	14898792	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG01258_ch_T0000568;gene_id=HG01258_ch_G0000208;Parent=HG01258_ch_G0000208;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG01258_ch_T0000568;Name=MIR12120
HG01258_chrY	CAT	exon	14898767	14898792	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG01258_ch_T0000568;gene_id=HG01258_ch_G0000208;Parent=HG01258_ch_T0000568;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG01258_ch_T0000568:0;Name=MIR12120;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	15123413	15125538	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG01258_ch_G0000209;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG01258_ch_G0000209;Name=TMSB4Y
HG01258_chrY	CAT	transcript	15123413	15125538	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_G0000209;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG01258_ch_T0000569;Name=TMSB4Y
HG01258_chrY	CAT	exon	15123413	15123949	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG01258_ch_T0000569:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15123850	15123949	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG01258_ch_T0000569:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	15123850	15123852	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG01258_ch_T0000569;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15123950	15124738	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG01258_ch_T0000569:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	15124739	15125538	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG01258_ch_T0000569:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15124739	15124773	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG01258_ch_T0000569:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	15124771	15124773	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG01258_ch_T0000569;gene_id=HG01258_ch_G0000209;Parent=HG01258_ch_T0000569;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG01258_ch_T0000569;Name=TMSB4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	15405302	15406003	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=HG01258_ch_G0000210;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000210;Name=VCY
HG01258_chrY	CAT	transcript	15405302	15406003	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_G0000210;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG01258_ch_T0000570;Name=VCY
HG01258_chrY	CAT	exon	15405302	15405676	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG01258_ch_T0000570:0;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15405401	15405676	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG01258_ch_T0000570:0;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	15405401	15405403	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG01258_ch_T0000570;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15405677	15405868	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG01258_ch_T0000570:0;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	15405869	15406003	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG01258_ch_T0000570:1;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15405869	15405970	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG01258_ch_T0000570:1;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	15405968	15405970	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000570;gene_id=HG01258_ch_G0000210;Parent=HG01258_ch_T0000570;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG01258_ch_T0000570;Name=VCY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	15475770	15476501	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=HG01258_ch_G0000211;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000211;Name=VCY1B
HG01258_chrY	CAT	transcript	15475770	15476501	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_G0000211;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG01258_ch_T0000571;Name=VCY1B
HG01258_chrY	CAT	exon	15475770	15475934	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG01258_ch_T0000571:0;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15475833	15475934	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG01258_ch_T0000571:0;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	15475833	15475835	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG01258_ch_T0000571;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15475935	15476126	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG01258_ch_T0000571:0;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	15476127	15476501	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG01258_ch_T0000571:1;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	15476127	15476402	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG01258_ch_T0000571:1;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	15476400	15476402	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000571;gene_id=HG01258_ch_G0000211;Parent=HG01258_ch_T0000571;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG01258_ch_T0000571;Name=VCY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	15942063	16264997	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG01258_ch_G0000212;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000212;Name=NLGN4Y
HG01258_chrY	CAT	transcript	15942063	16152971	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000572;Name=NLGN4Y
HG01258_chrY	CAT	exon	15942063	15942388	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000572:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15942389	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000572:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000572:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000572:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000572;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000572:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000572:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000572:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000572:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000572:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000572:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16152873	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000572:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16152874	16152971	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000572:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16152874	16152959	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000572:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16152957	16152959	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000572;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000572;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000572;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15942063	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000573;Name=NLGN4Y
HG01258_chrY	CAT	exon	15942063	15942388	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15942389	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000573:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000573:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142571	16142691	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000573:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16142571	16142573	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000573;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000573:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000573:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000573:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000573:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000573:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000573:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000573:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000573;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000573;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000573;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15942063	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000574;Name=NLGN4Y
HG01258_chrY	CAT	exon	15942063	15942388	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15942389	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000574;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000574:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000574:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000574:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000574;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000574;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000574;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15942063	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000575;Name=NLGN4Y
HG01258_chrY	CAT	exon	15942063	15942388	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15942389	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000575:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000575:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000575;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000575:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000575:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000575:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000575:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000575:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000575:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000575:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000575:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000575:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000575;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000575;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000575;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15942063	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000576;Name=NLGN4Y
HG01258_chrY	CAT	exon	15942063	15943019	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15943020	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000576;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000576:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000576:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000576:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000576;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000576;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000576;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943193	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000577;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943193	15943345	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15943346	16041472	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000577:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041473	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000577:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000577;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000577:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000577:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000577:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000577:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000577:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000577:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000577:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000577:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000577:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000577;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000577;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000577;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943419	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000578;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943419	15943731	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15943732	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000578;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000578:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000578:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000578:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000578;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000578;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000578;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943419	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000579;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943419	15943731	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15943732	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000579:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000579:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000579;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000579:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000579:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000579:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000579:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000579:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000579:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000579:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000579:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000579:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000579;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000579;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000579;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16152971	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000580;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000580:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000580:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000580:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000580:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000580;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000580:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000580:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000580:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000580:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000580:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000580:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16152873	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000580:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16152874	16152971	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000580:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16152874	16152959	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000580:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16152957	16152959	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000580;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000580;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000580;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000581;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000581;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000581:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000581:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000581:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000581;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000581;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000581;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000582;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944155	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944156	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000582;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000582:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000582:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000582:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000582;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000582;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000582;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000583;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	16003634	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16003635	16003736	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16003737	16007070	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16007071	16007175	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16007176	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000583:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000583;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000583:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000583:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000583:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000583:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000583:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000583:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000583;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000583;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000583;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000584;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944155	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944156	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000584:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000584:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000584;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000584:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000584:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000584:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000584:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000584:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000584:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000584:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000584:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000584:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000584;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000584;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000584;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000585;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944004	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944005	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000585:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000585:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000585;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000585:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000585:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000585:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000585:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000585:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000585:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000585:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000585:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000585:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000585;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000585;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000585;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000586;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000586:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000586:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000586;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000586:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000586:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000586:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000586:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000586:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000586:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000586:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000586:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000586:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000586;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000586;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000586;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000587;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	15980040	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	15980041	15980120	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15980121	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000587;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000587:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000587:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000587:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000587;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000587;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000587;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000588;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944004	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944005	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000588;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000588:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000588:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000588:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000588;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000588;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000588;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000589;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944383	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944384	15980040	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	15980041	15980120	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15980121	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000589:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000589;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000589:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000589:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000589:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000589:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000589:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000589:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000589;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000589;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000589;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15943976	16152971	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000590;Name=NLGN4Y
HG01258_chrY	CAT	exon	15943976	15944155	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000590:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15944156	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000590:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000590:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000590:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000590;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000590:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000590:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000590:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000590:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000590:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000590:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16152873	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000590:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16152874	16152971	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000590:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16152874	16152959	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000590:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16152957	16152959	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000590;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000590;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000590;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	15973183	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000591;Name=NLGN4Y
HG01258_chrY	CAT	exon	15973183	15980120	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	15980121	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000591;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000591:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000591:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000591:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000591;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000591;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000591;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16002050	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000592;Name=NLGN4Y
HG01258_chrY	CAT	exon	16002050	16003752	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16003753	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000592;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000592:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000592:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000592:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000592;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000592;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000592;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16002050	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000593;Name=NLGN4Y
HG01258_chrY	CAT	exon	16002050	16003752	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16003753	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000593:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000593:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000593;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000593:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000593:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000593:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000593:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000593:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000593:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000593:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000593:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000593:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000593;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000593;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000593;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16007071	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000594;Name=NLGN4Y
HG01258_chrY	CAT	exon	16007071	16007175	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16007176	16041460	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000594;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000594:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000594:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000594:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000594;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000594;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000594;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16041461	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000595;Name=NLGN4Y
HG01258_chrY	CAT	exon	16041461	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16120486	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16120487	16120580	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16120544	16120580	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16120544	16120546	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000595;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16120581	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000595:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000595:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000595:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000595;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000595;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000595;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16041473	16152971	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000596;Name=NLGN4Y
HG01258_chrY	CAT	exon	16041473	16042043	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000596:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16041572	16042043	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000596:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16041572	16041574	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000596;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16042044	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000596:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000596:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16138902	16138961	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000596:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000596:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000596:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142539	16142691	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000596:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16152873	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000596:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16152874	16152971	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000596:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16152874	16152959	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000596:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16152957	16152959	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000596;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000596;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000596;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	16124233	16264997	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_G0000212;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG01258_ch_T0000597;Name=NLGN4Y
HG01258_chrY	CAT	exon	16124233	16124253	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16124254	16138901	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000597:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16138902	16138961	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16138962	16142538	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000597:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16142539	16142691	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16142571	16142691	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000597:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	16142571	16142573	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG01258_ch_T0000597;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16142692	16243556	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000597:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16243557	16243742	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16243557	16243742	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000597:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16243743	16249072	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000597:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16249073	16249862	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16249073	16249862	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000597:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16249863	16259755	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG01258_ch_T0000597:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16259756	16264997	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG01258_ch_T0000597:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	16259756	16260605	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG01258_ch_T0000597:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	16260603	16260605	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000597;gene_id=HG01258_ch_G0000212;Parent=HG01258_ch_T0000597;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG01258_ch_T0000597;Name=NLGN4Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	16213053	16223402	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG01258_ch_G0000213;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG01258_ch_G0000213;Name=NLGN4Y-AS1
HG01258_chrY	CAT	transcript	16213053	16223402	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_G0000213;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG01258_ch_T0000598;Name=NLGN4Y-AS1
HG01258_chrY	CAT	exon	16213053	16213398	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01258_ch_T0000598:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16213399	16218033	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01258_ch_T0000598:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16218034	16218121	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01258_ch_T0000598:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16218122	16220687	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01258_ch_T0000598:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16220688	16220756	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01258_ch_T0000598:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16220757	16223373	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG01258_ch_T0000598:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16223374	16223402	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG01258_ch_T0000598;gene_id=HG01258_ch_G0000213;Parent=HG01258_ch_T0000598;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG01258_ch_T0000598:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	16666418	16784435	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG01258_ch_G0000214;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG01258_ch_G0000214;Name=LOC107987355
HG01258_chrY	CAT	transcript	16666418	16784435	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_G0000214;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG01258_ch_T0000599;Name=LOC107987355
HG01258_chrY	CAT	exon	16666418	16666490	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_T0000599;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01258_ch_T0000599:0;Name=LOC107987355;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16666491	16767970	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_T0000599;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG01258_ch_T0000599:0;Name=LOC107987355;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16767971	16768193	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_T0000599;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01258_ch_T0000599:1;Name=LOC107987355;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	16768194	16784349	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_T0000599;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG01258_ch_T0000599:1;Name=LOC107987355;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	16784350	16784435	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG01258_ch_T0000599;gene_id=HG01258_ch_G0000214;Parent=HG01258_ch_T0000599;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG01258_ch_T0000599:2;Name=LOC107987355;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	17557606	17557737	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG01258_ch_G0000215;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG01258_ch_G0000215;Name=LOC124900508
HG01258_chrY	CAT	transcript	17557606	17557737	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG01258_ch_T0000600;gene_id=HG01258_ch_G0000215;Parent=HG01258_ch_G0000215;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG01258_ch_T0000600;Name=LOC124900508
HG01258_chrY	CAT	exon	17557606	17557737	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG01258_ch_T0000600;gene_id=HG01258_ch_G0000215;Parent=HG01258_ch_T0000600;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG01258_ch_T0000600:0;Name=LOC124900508;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	18920283	18936059	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;gene_id=HG01258_ch_G0000216;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG01258_ch_G0000216;Name=FAM41AY2
HG01258_chrY	CAT	transcript	18920283	18936059	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_G0000216;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG01258_ch_T0000601;Name=FAM41AY2
HG01258_chrY	CAT	exon	18920283	18920440	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18920441	18921035	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18921036	18921085	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18921086	18932414	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18932415	18932543	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18932544	18932790	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18932791	18932884	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18932885	18933477	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18933478	18933648	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18933649	18933757	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18933758	18933851	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18933852	18934125	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18934126	18934335	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18934336	18934628	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18934629	18934816	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18934817	18935028	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18935029	18935250	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18935251	18935332	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG01258_ch_T0000601:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18935333	18936059	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG01258_ch_T0000601;gene_id=HG01258_ch_G0000216;Parent=HG01258_ch_T0000601;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG01258_ch_T0000601:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	18973464	18982724	.	-	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;gene_id=HG01258_ch_G0000217;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG01258_ch_G0000217;Name=LOC105377217
HG01258_chrY	CAT	transcript	18973464	18982724	1000	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_G0000217;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG01258_ch_T0000602;Name=LOC105377217
HG01258_chrY	CAT	exon	18973464	18975330	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_T0000602;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01258_ch_T0000602:0;Name=LOC105377217;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18975331	18976040	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_T0000602;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG01258_ch_T0000602:0;Name=LOC105377217;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18976041	18976169	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_T0000602;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01258_ch_T0000602:1;Name=LOC105377217;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18976170	18977382	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_T0000602;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG01258_ch_T0000602:1;Name=LOC105377217;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18977383	18982724	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG01258_ch_T0000602;gene_id=HG01258_ch_G0000217;Parent=HG01258_ch_T0000602;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG01258_ch_T0000602:2;Name=LOC105377217;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	18994513	18998812	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;gene_id=HG01258_ch_G0000218;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG01258_ch_G0000218;Name=FAM224A
HG01258_chrY	CAT	transcript	18994513	18998812	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_G0000218;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG01258_ch_T0000603;Name=FAM224A
HG01258_chrY	CAT	exon	18994513	18994696	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_T0000603;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01258_ch_T0000603:0;Name=FAM224A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18994697	18996031	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_T0000603;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG01258_ch_T0000603:0;Name=FAM224A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18996032	18996149	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_T0000603;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01258_ch_T0000603:1;Name=FAM224A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	18996150	18998654	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_T0000603;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG01258_ch_T0000603:1;Name=FAM224A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	18998655	18998812	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG01258_ch_T0000603;gene_id=HG01258_ch_G0000218;Parent=HG01258_ch_T0000603;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG01258_ch_T0000603:2;Name=FAM224A;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19107848	19108648	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=HG01258_ch_G0000219;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG01258_ch_G0000219;Name=LOC105377219
HG01258_chrY	CAT	transcript	19107848	19108648	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_G0000219;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG01258_ch_T0000604;Name=LOC105377219
HG01258_chrY	CAT	exon	19107848	19108304	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_T0000604;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01258_ch_T0000604:0;Name=LOC105377219;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19108305	19108392	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_T0000604;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG01258_ch_T0000604:0;Name=LOC105377219;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19108393	19108478	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_T0000604;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01258_ch_T0000604:1;Name=LOC105377219;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19108479	19108565	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_T0000604;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG01258_ch_T0000604:1;Name=LOC105377219;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19108566	19108648	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG01258_ch_T0000604;gene_id=HG01258_ch_G0000219;Parent=HG01258_ch_T0000604;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG01258_ch_T0000604:2;Name=LOC105377219;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19112266	19119126	.	-	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;gene_id=HG01258_ch_G0000220;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=HG01258_ch_G0000220;Name=LOC124905303
HG01258_chrY	CAT	transcript	19112266	19119126	1000	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_G0000220;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG01258_ch_T0000605;Name=LOC124905303
HG01258_chrY	CAT	exon	19112266	19116210	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_T0000605;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01258_ch_T0000605:0;Name=LOC124905303;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19116211	19116298	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_T0000605;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG01258_ch_T0000605:0;Name=LOC124905303;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19116299	19117047	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_T0000605;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01258_ch_T0000605:1;Name=LOC124905303;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19117048	19117134	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_T0000605;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG01258_ch_T0000605:1;Name=LOC124905303;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19117135	19119126	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG01258_ch_T0000605;gene_id=HG01258_ch_G0000220;Parent=HG01258_ch_T0000605;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG01258_ch_T0000605:2;Name=LOC124905303;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19188318	19189898	.	-	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;gene_id=HG01258_ch_G0000221;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG01258_ch_G0000221;Name=XKRY
HG01258_chrY	CAT	transcript	19188318	19189898	1000	-	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG01258_ch_T0000606;gene_id=HG01258_ch_G0000221;Parent=HG01258_ch_G0000221;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=HG01258_ch_T0000606;Name=XKRY
HG01258_chrY	CAT	exon	19188318	19189898	.	-	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG01258_ch_T0000606;gene_id=HG01258_ch_G0000221;Parent=HG01258_ch_T0000606;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:HG01258_ch_T0000606:0;Name=XKRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19297590	19299549	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1;gene_id=HG01258_ch_G0000222;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=augTM,transMap;ID=HG01258_ch_G0000222;Name=CDY2A
HG01258_chrY	CAT	transcript	19297590	19299549	10000	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000607;gene_id=HG01258_ch_G0000222;Parent=HG01258_ch_G0000222;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG01258_ch_T0000607;Name=CDY2A
HG01258_chrY	CAT	exon	19297590	19299549	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000607;gene_id=HG01258_ch_G0000222;Parent=HG01258_ch_T0000607;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG01258_ch_T0000607:0;Name=CDY2A;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19297596	19299221	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000607;gene_id=HG01258_ch_G0000222;Parent=HG01258_ch_T0000607;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG01258_ch_T0000607:0;Name=CDY2A;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	19297596	19297598	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000607;gene_id=HG01258_ch_G0000222;Parent=HG01258_ch_T0000607;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG01258_ch_T0000607;Name=CDY2A;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19299219	19299221	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000607;gene_id=HG01258_ch_G0000222;Parent=HG01258_ch_T0000607;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG01258_ch_T0000607;Name=CDY2A;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19445040	19447000	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1;gene_id=HG01258_ch_G0000223;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=augTM,transMap;ID=HG01258_ch_G0000223;Name=CDY2B
HG01258_chrY	CAT	transcript	19445040	19447000	10000	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000608;gene_id=HG01258_ch_G0000223;Parent=HG01258_ch_G0000223;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG01258_ch_T0000608;Name=CDY2B
HG01258_chrY	CAT	exon	19445040	19447000	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000608;gene_id=HG01258_ch_G0000223;Parent=HG01258_ch_T0000608;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG01258_ch_T0000608:0;Name=CDY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19445368	19446993	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000608;gene_id=HG01258_ch_G0000223;Parent=HG01258_ch_T0000608;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG01258_ch_T0000608:0;Name=CDY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19445368	19445370	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000608;gene_id=HG01258_ch_G0000223;Parent=HG01258_ch_T0000608;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG01258_ch_T0000608;Name=CDY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	19446991	19446993	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000608;gene_id=HG01258_ch_G0000223;Parent=HG01258_ch_T0000608;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG01258_ch_T0000608;Name=CDY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19554711	19556291	.	+	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;gene_id=HG01258_ch_G0000224;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG01258_ch_G0000224;Name=XKRY2
HG01258_chrY	CAT	transcript	19554711	19556291	1000	+	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG01258_ch_T0000609;gene_id=HG01258_ch_G0000224;Parent=HG01258_ch_G0000224;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG01258_ch_T0000609;Name=XKRY2
HG01258_chrY	CAT	exon	19554711	19556291	.	+	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG01258_ch_T0000609;gene_id=HG01258_ch_G0000224;Parent=HG01258_ch_T0000609;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG01258_ch_T0000609:0;Name=XKRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19625490	19632350	.	+	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;gene_id=HG01258_ch_G0000225;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=HG01258_ch_G0000225;Name=LOC124905302
HG01258_chrY	CAT	transcript	19625490	19632350	1000	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_G0000225;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG01258_ch_T0000610;Name=LOC124905302
HG01258_chrY	CAT	exon	19625490	19627481	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_T0000610;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01258_ch_T0000610:0;Name=LOC124905302;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19627482	19627568	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_T0000610;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG01258_ch_T0000610:0;Name=LOC124905302;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19627569	19628317	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_T0000610;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01258_ch_T0000610:1;Name=LOC124905302;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19628318	19628405	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_T0000610;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG01258_ch_T0000610:1;Name=LOC124905302;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19628406	19632350	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=HG01258_ch_T0000610;gene_id=HG01258_ch_G0000225;Parent=HG01258_ch_T0000610;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG01258_ch_T0000610:2;Name=LOC124905302;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19635968	19636768	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=HG01258_ch_G0000226;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG01258_ch_G0000226;Name=LOC105377218
HG01258_chrY	CAT	transcript	19635968	19636768	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_G0000226;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG01258_ch_T0000611;Name=LOC105377218
HG01258_chrY	CAT	exon	19635968	19636050	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_T0000611;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01258_ch_T0000611:0;Name=LOC105377218;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19636051	19636137	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_T0000611;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG01258_ch_T0000611:0;Name=LOC105377218;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19636138	19636223	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_T0000611;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01258_ch_T0000611:1;Name=LOC105377218;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19636224	19636311	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_T0000611;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG01258_ch_T0000611:1;Name=LOC105377218;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19636312	19636768	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG01258_ch_T0000611;gene_id=HG01258_ch_G0000226;Parent=HG01258_ch_T0000611;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG01258_ch_T0000611:2;Name=LOC105377218;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19745802	19750093	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;gene_id=HG01258_ch_G0000227;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG01258_ch_G0000227;Name=FAM224B
HG01258_chrY	CAT	transcript	19745802	19750093	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_G0000227;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG01258_ch_T0000612;Name=FAM224B
HG01258_chrY	CAT	exon	19745802	19745938	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_T0000612;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01258_ch_T0000612:0;Name=FAM224B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19745939	19748433	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_T0000612;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG01258_ch_T0000612:0;Name=FAM224B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19748434	19748551	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_T0000612;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01258_ch_T0000612:1;Name=FAM224B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19748552	19749886	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_T0000612;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG01258_ch_T0000612:1;Name=FAM224B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19749887	19750093	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG01258_ch_T0000612;gene_id=HG01258_ch_G0000227;Parent=HG01258_ch_T0000612;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG01258_ch_T0000612:2;Name=FAM224B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19766421	19771113	.	+	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;gene_id=HG01258_ch_G0000228;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG01258_ch_G0000228;Name=LOC105377220
HG01258_chrY	CAT	transcript	19766421	19771113	1000	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_G0000228;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG01258_ch_T0000613;Name=LOC105377220
HG01258_chrY	CAT	exon	19766421	19767195	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_T0000613;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01258_ch_T0000613:0;Name=LOC105377220;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19767196	19768407	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_T0000613;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG01258_ch_T0000613:0;Name=LOC105377220;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19768408	19768536	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_T0000613;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01258_ch_T0000613:1;Name=LOC105377220;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19768537	19769246	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_T0000613;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG01258_ch_T0000613:1;Name=LOC105377220;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19769247	19771113	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG01258_ch_T0000613;gene_id=HG01258_ch_G0000228;Parent=HG01258_ch_T0000613;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG01258_ch_T0000613:2;Name=LOC105377220;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19808519	19824301	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;gene_id=HG01258_ch_G0000229;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG01258_ch_G0000229;Name=FAM41AY1
HG01258_chrY	CAT	transcript	19808519	19824301	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_G0000229;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG01258_ch_T0000614;Name=FAM41AY1
HG01258_chrY	CAT	exon	19808519	19809245	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19809246	19809327	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19809328	19809549	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19809550	19809761	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19809762	19809949	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19809950	19810242	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19810243	19810452	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19810453	19810726	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19810727	19810820	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19810821	19810929	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19810930	19811100	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19811101	19811693	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19811694	19811787	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19811788	19812034	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19812035	19812163	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19812164	19823498	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19823499	19823548	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19823549	19824143	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG01258_ch_T0000614:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19824144	19824301	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG01258_ch_T0000614;gene_id=HG01258_ch_G0000229;Parent=HG01258_ch_T0000614;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG01258_ch_T0000614:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19903291	19937126	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;gene_id=HG01258_ch_G0000230;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=HG01258_ch_G0000230;Name=LOC124905304
HG01258_chrY	CAT	transcript	19903291	19937126	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_G0000230;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=HG01258_ch_T0000615;Name=LOC124905304
HG01258_chrY	CAT	exon	19903291	19903331	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:0;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19903332	19905732	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:0;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19905733	19905895	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:1;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19905896	19906558	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:1;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19906559	19906660	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:2;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19906661	19909022	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:2;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19909023	19909226	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:3;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19909227	19910942	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:3;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19910943	19911077	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:4;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19911078	19919879	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:4;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19919880	19920112	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:5;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19920113	19920205	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:5;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19920206	19920311	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:6;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19920312	19925922	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:6;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19925923	19926050	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:7;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19926051	19934818	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG01258_ch_T0000615:7;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19934819	19937126	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG01258_ch_T0000615;gene_id=HG01258_ch_G0000230;Parent=HG01258_ch_T0000615;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG01258_ch_T0000615:8;Name=LOC124905304;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	19948902	20008191	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=HG01258_ch_G0000231;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000231;Name=HSFY1
HG01258_chrY	CAT	transcript	19948902	19967851	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01258_ch_T0000616;Name=HSFY1
HG01258_chrY	CAT	exon	19948902	19949096	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000616:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19949071	19949096	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000616:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19949071	19949073	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01258_ch_T0000616;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19949097	19966291	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000616:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19966292	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000616:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19966292	19966559	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000616:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	19967037	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000616:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19967038	19967851	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000616:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19967038	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000616:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	19967728	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000616;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000616;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01258_ch_T0000616;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	19965940	19967851	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01258_ch_T0000617;Name=HSFY1
HG01258_chrY	CAT	exon	19965940	19966193	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000617:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19966183	19966193	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000617:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19966183	19966185	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01258_ch_T0000617;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966194	19966291	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000617:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19966292	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000617:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19966292	19966559	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000617:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	19967037	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000617:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19967038	19967851	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000617:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19967038	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000617:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	19967728	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000617;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000617;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01258_ch_T0000617;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	19965950	20008191	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01258_ch_T0000618;Name=HSFY1
HG01258_chrY	CAT	exon	19965950	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000618:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19966047	19966559	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000618:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19966047	19966049	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01258_ch_T0000618;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	20007763	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000618:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20007764	20008191	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000618:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20007764	20007862	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000618:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20007860	20007862	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000618;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000618;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01258_ch_T0000618;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	19965950	19971333	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG01258_ch_T0000619;Name=HSFY1
HG01258_chrY	CAT	exon	19965950	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000619:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	19969372	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000619:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19969373	19969482	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000619:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19969483	19970043	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000619:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19970044	19970130	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000619:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19970131	19971177	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000619:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19971178	19971333	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000619;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000619;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000619:3;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	19965950	20008191	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG01258_ch_T0000620;Name=HSFY1
HG01258_chrY	CAT	exon	19965950	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	19969372	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000620:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19969373	19969482	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19969483	19970043	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000620:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19970044	19970130	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19970131	19971177	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000620:2;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19971178	19971332	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:3;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19971333	20001900	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000620:3;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20001901	20001986	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:4;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20001987	20007763	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG01258_ch_T0000620:4;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20007764	20008191	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000620;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000620;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG01258_ch_T0000620:5;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	19965979	19967851	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_G0000231;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG01258_ch_T0000621;Name=HSFY1
HG01258_chrY	CAT	exon	19965979	19966559	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000621:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19966047	19966559	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000621:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	19966047	19966049	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG01258_ch_T0000621;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	19966560	19967037	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG01258_ch_T0000621:0;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	19967038	19967851	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG01258_ch_T0000621:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	19967038	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG01258_ch_T0000621:1;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	19967728	19967730	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000621;gene_id=HG01258_ch_G0000231;Parent=HG01258_ch_T0000621;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG01258_ch_T0000621;Name=HSFY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20000434	20009749	.	-	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=HG01258_ch_G0000232;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG01258_ch_G0000232;Name=TTTY9B
HG01258_chrY	CAT	transcript	20000434	20009749	1000	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_G0000232;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG01258_ch_T0000622;Name=TTTY9B
HG01258_chrY	CAT	exon	20000434	20001576	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01258_ch_T0000622:0;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20001577	20006639	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01258_ch_T0000622:0;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20006640	20006776	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01258_ch_T0000622:1;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20006777	20007358	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01258_ch_T0000622:1;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20007359	20007472	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01258_ch_T0000622:2;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20007473	20007833	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01258_ch_T0000622:2;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20007834	20007934	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01258_ch_T0000622:3;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20007935	20009607	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG01258_ch_T0000622:3;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20009608	20009749	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG01258_ch_T0000622;gene_id=HG01258_ch_G0000232;Parent=HG01258_ch_T0000622;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG01258_ch_T0000622:4;Name=TTTY9B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20149113	20158428	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=HG01258_ch_G0000233;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG01258_ch_G0000233;Name=TTTY9A
HG01258_chrY	CAT	transcript	20149113	20158428	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_G0000233;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG01258_ch_T0000623;Name=TTTY9A
HG01258_chrY	CAT	exon	20149113	20149254	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01258_ch_T0000623:0;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20149255	20150927	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01258_ch_T0000623:0;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20150928	20151028	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01258_ch_T0000623:1;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20151029	20151389	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01258_ch_T0000623:1;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20151390	20151503	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01258_ch_T0000623:2;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20151504	20152085	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01258_ch_T0000623:2;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20152086	20152222	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01258_ch_T0000623:3;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20152223	20157285	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG01258_ch_T0000623:3;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20157286	20158428	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG01258_ch_T0000623;gene_id=HG01258_ch_G0000233;Parent=HG01258_ch_T0000623;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG01258_ch_T0000623:4;Name=TTTY9A;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20150671	20209967	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;gene_id=HG01258_ch_G0000234;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000234;Name=HSFY2
HG01258_chrY	CAT	transcript	20150671	20192934	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01258_ch_T0000624;Name=HSFY2
HG01258_chrY	CAT	exon	20150671	20151098	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000624:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20151000	20151098	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000624:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20151000	20151002	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01258_ch_T0000624;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20151099	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000624:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192934	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000624:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192305	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000624:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20192815	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000624;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000624;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01258_ch_T0000624;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20150671	20192934	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG01258_ch_T0000625;Name=HSFY2
HG01258_chrY	CAT	exon	20150671	20151098	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20151099	20156875	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01258_ch_T0000625:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20156876	20156961	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20156962	20187529	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01258_ch_T0000625:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20187530	20187684	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20187685	20188731	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01258_ch_T0000625:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20188732	20188818	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:3;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20188819	20189381	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01258_ch_T0000625:3;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20189382	20189491	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:4;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20189492	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG01258_ch_T0000625:4;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192934	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000625;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000625;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG01258_ch_T0000625:5;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20188707	20192934	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01258_ch_T0000626;Name=HSFY2
HG01258_chrY	CAT	exon	20188707	20188818	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000626:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20188797	20188818	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000626:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20188797	20188799	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01258_ch_T0000626;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20188819	20189381	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000626:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20189382	20189491	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000626:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20189382	20189491	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000626:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20189492	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000626:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192934	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000626:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192305	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000626:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20192815	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000626;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000626;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01258_ch_T0000626;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20191013	20192925	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01258_ch_T0000627;Name=HSFY2
HG01258_chrY	CAT	exon	20191013	20191826	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000627:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20191134	20191826	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000627:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20191134	20191136	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01258_ch_T0000627;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20191827	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000627:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192572	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000627:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192305	20192572	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000627:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20192573	20192670	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000627:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192671	20192925	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000627:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192671	20192681	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000627:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20192679	20192681	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000627;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000627;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01258_ch_T0000627;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20191013	20192934	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01258_ch_T0000628;Name=HSFY2
HG01258_chrY	CAT	exon	20191013	20191826	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000628:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20191134	20191826	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000628:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20191134	20191136	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01258_ch_T0000628;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20191827	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000628:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192934	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000628:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192305	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000628:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20192815	20192817	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000628;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000628;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01258_ch_T0000628;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20191013	20209967	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_G0000234;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG01258_ch_T0000629;Name=HSFY2
HG01258_chrY	CAT	exon	20191013	20191826	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000629:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20191134	20191826	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000629:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20191134	20191136	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG01258_ch_T0000629;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20191827	20192304	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000629:0;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20192305	20192572	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000629:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20192305	20192572	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000629:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20192573	20209772	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG01258_ch_T0000629:1;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20209773	20209967	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG01258_ch_T0000629:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20209773	20209798	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG01258_ch_T0000629:2;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20209796	20209798	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000629;gene_id=HG01258_ch_G0000234;Parent=HG01258_ch_T0000629;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG01258_ch_T0000629;Name=HSFY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20221744	20255598	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG01258_ch_G0000235;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=HG01258_ch_G0000235;Name=LOC124905305
HG01258_chrY	CAT	transcript	20221744	20255596	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_G0000235;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG01258_ch_T0000630;Name=LOC124905305
HG01258_chrY	CAT	exon	20221744	20224051	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:0;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20224052	20232819	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:0;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20232820	20232947	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:1;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20232948	20238558	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:1;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20238559	20238990	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:2;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20238991	20247783	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:2;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20247784	20247918	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:3;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20247919	20249634	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:3;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20249635	20249838	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:4;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20249839	20252200	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:4;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20252201	20252302	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:5;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20252303	20252955	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:5;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20252956	20253118	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:6;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20253119	20255519	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000630:6;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20255520	20255596	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000630;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000630;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000630:7;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20221744	20255598	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_G0000235;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG01258_ch_T0000631;Name=LOC124905305
HG01258_chrY	CAT	exon	20221744	20224051	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:0;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20224052	20238558	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:0;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20238559	20238990	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:1;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20238991	20247783	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:1;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20247784	20247918	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:2;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20247919	20249634	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:2;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20249635	20249838	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:3;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20249839	20252200	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:3;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20252201	20252302	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:4;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20252303	20252955	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:4;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20252956	20253118	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:5;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20253119	20255519	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG01258_ch_T0000631:5;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20255520	20255598	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG01258_ch_T0000631;gene_id=HG01258_ch_G0000235;Parent=HG01258_ch_T0000631;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG01258_ch_T0000631:6;Name=LOC124905305;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20252929	20253090	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG01258_ch_G0000236;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG01258_ch_G0000236;Name=LOC124905307
HG01258_chrY	CAT	transcript	20252929	20253090	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG01258_ch_T0000632;gene_id=HG01258_ch_G0000236;Parent=HG01258_ch_G0000236;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG01258_ch_T0000632;Name=LOC124905307
HG01258_chrY	CAT	exon	20252929	20253090	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG01258_ch_T0000632;gene_id=HG01258_ch_G0000236;Parent=HG01258_ch_T0000632;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG01258_ch_T0000632:0;Name=LOC124905307;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20291710	20496769	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG01258_ch_G0000237;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG01258_ch_G0000237;Name=TTTY14
HG01258_chrY	CAT	transcript	20291710	20495225	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000633;Name=TTTY14
HG01258_chrY	CAT	exon	20291710	20292043	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000633:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20292044	20296276	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000633:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20296277	20296414	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000633:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20296415	20331584	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000633:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20331585	20331699	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000633:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20331700	20487945	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000633:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20487946	20488020	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000633:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20488021	20495162	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000633:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20495163	20495225	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG01258_ch_T0000633;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000633;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000633:4;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20291710	20495251	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000634;Name=TTTY14
HG01258_chrY	CAT	exon	20291710	20292043	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000634:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20292044	20296276	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000634:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20296277	20296414	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000634:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20296415	20492720	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000634:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20492721	20492783	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000634:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20492784	20495162	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000634:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20495163	20495251	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG01258_ch_T0000634;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000634;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000634:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20291710	20496769	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000635;Name=TTTY14
HG01258_chrY	CAT	exon	20291710	20292043	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000635:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20292044	20351959	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000635:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20351960	20352058	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000635:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20352059	20352573	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000635:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20352574	20352692	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000635:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20352693	20487945	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000635:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20487946	20488020	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000635:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20488021	20496266	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000635:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20496267	20496769	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG01258_ch_T0000635;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000635;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000635:4;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20291710	20496769	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000636;Name=TTTY14
HG01258_chrY	CAT	exon	20291710	20292043	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000636:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20292044	20296276	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000636:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20296277	20296414	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000636:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20296415	20487945	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000636:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20487946	20488020	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000636:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20488021	20496266	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000636:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20496267	20496769	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG01258_ch_T0000636;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000636;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000636:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20291710	20496769	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000637;Name=TTTY14
HG01258_chrY	CAT	exon	20291710	20292043	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000637;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000637:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20292044	20296276	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000637;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000637:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20296277	20296414	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000637;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000637:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20296415	20496266	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000637;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000637:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20496267	20496769	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG01258_ch_T0000637;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000637;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000637:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20351224	20495251	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000638;Name=TTTY14
HG01258_chrY	CAT	exon	20351224	20352058	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000638:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20352059	20463764	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000638:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20463765	20463918	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000638:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20463919	20464464	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000638:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20464465	20464514	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000638:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20464515	20487945	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000638:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20487946	20488020	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000638:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20488021	20495162	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000638:3;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20495163	20495251	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG01258_ch_T0000638;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000638;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000638:4;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20351668	20495225	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000639;Name=TTTY14
HG01258_chrY	CAT	exon	20351668	20352058	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000639;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000639:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20352059	20487945	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000639;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000639:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20487946	20488020	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000639;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000639:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20488021	20495162	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000639;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000639:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20495163	20495225	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG01258_ch_T0000639;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000639;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000639:2;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20351668	20496769	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01258_ch_T0000640;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_G0000237;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG01258_ch_T0000640;Name=TTTY14
HG01258_chrY	CAT	exon	20351668	20352058	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01258_ch_T0000640;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000640;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000640:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20352059	20496266	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01258_ch_T0000640;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000640;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG01258_ch_T0000640:0;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20496267	20496769	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG01258_ch_T0000640;gene_id=HG01258_ch_G0000237;Parent=HG01258_ch_T0000640;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG01258_ch_T0000640:1;Name=TTTY14;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20499078	20508100	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG01258_ch_G0000238;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG01258_ch_G0000238;Name=LOC124905306
HG01258_chrY	CAT	transcript	20499078	20508100	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01258_ch_T0000641;gene_id=HG01258_ch_G0000238;Parent=HG01258_ch_G0000238;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG01258_ch_T0000641;Name=LOC124905306
HG01258_chrY	CAT	exon	20499078	20499947	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01258_ch_T0000641;gene_id=HG01258_ch_G0000238;Parent=HG01258_ch_T0000641;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG01258_ch_T0000641:0;Name=LOC124905306;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20499948	20505721	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01258_ch_T0000641;gene_id=HG01258_ch_G0000238;Parent=HG01258_ch_T0000641;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG01258_ch_T0000641:0;Name=LOC124905306;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20505722	20508100	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG01258_ch_T0000641;gene_id=HG01258_ch_G0000238;Parent=HG01258_ch_T0000641;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG01258_ch_T0000641:1;Name=LOC124905306;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20874707	20922418	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG01258_ch_G0000239;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG01258_ch_G0000239;Name=BCORP1
HG01258_chrY	CAT	transcript	20874707	20922418	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_G0000239;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG01258_ch_T0000642;Name=BCORP1
HG01258_chrY	CAT	exon	20874707	20876140	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:0;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20876141	20878189	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:0;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20878190	20878345	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:1;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20878346	20878554	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:1;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20878555	20878632	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:2;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20878633	20884370	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:2;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20884371	20884492	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:3;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20884493	20885720	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:3;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20885721	20886639	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:4;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20886640	20893169	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:4;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20893170	20893409	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:5;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20893410	20893904	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:5;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20893905	20894168	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:6;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20894169	20899433	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:6;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20899434	20899559	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:7;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20899560	20922296	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000642:7;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20922297	20922418	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG01258_ch_T0000642;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000642;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000642:8;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20874707	20922418	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_G0000239;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG01258_ch_T0000643;Name=BCORP1
HG01258_chrY	CAT	exon	20874707	20876140	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:0;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20876141	20876332	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:0;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20876333	20876393	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:1;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20876394	20878189	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:1;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20878190	20878345	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:2;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20878346	20878554	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:2;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20878555	20878632	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:3;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20878633	20879224	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:3;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20879225	20879370	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:4;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20879371	20884370	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:4;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20884371	20884492	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:5;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20884493	20885720	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:5;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20885721	20886639	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:6;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20886640	20893169	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:6;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20893170	20893409	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:7;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20893410	20893904	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:7;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20893905	20894168	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:8;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20894169	20899433	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:8;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20899434	20899559	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:9;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20899560	20922296	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG01258_ch_T0000643:9;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20922297	20922418	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG01258_ch_T0000643;gene_id=HG01258_ch_G0000239;Parent=HG01258_ch_T0000643;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG01258_ch_T0000643:10;Name=BCORP1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20900881	20902720	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG01258_ch_G0000240;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000240;Name=LOC102723934
HG01258_chrY	CAT	transcript	20900881	20902720	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_G0000240;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG01258_ch_T0000644;Name=LOC102723934
HG01258_chrY	CAT	exon	20900881	20901269	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01258_ch_T0000644:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20900881	20901269	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01258_ch_T0000644:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	20900881	20900883	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG01258_ch_T0000644;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20901270	20901581	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG01258_ch_T0000644:0;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20901582	20901593	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01258_ch_T0000644:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20901582	20901593	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01258_ch_T0000644:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20901594	20901673	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG01258_ch_T0000644:1;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20901674	20902720	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG01258_ch_T0000644:2;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	20901674	20902697	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG01258_ch_T0000644:2;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	20902695	20902697	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000644;gene_id=HG01258_ch_G0000240;Parent=HG01258_ch_T0000644;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG01258_ch_T0000644;Name=LOC102723934;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20973138	20986248	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG01258_ch_G0000241;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG01258_ch_G0000241;Name=LOC105377223
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000645;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20976051	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000645:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976052	20976468	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000645:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20976469	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000645:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977262	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000645:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977263	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000645:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20986220	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000645:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20986221	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG01258_ch_T0000645;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000645;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000645:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000646;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20976051	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000646:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976052	20976468	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000646:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20976469	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000646:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977278	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000646:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977279	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000646:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20986220	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000646:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20986221	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG01258_ch_T0000646;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000646;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000646:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000647;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20976051	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000647:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976052	20976468	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000647:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20976469	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000647:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977262	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000647:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977263	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000647:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20978578	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000647:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20978579	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG01258_ch_T0000647;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000647;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000647:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000648;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20974793	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000648:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20974794	20976468	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000648:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20976469	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000648:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977278	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000648:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977279	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000648:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20978578	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000648:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20978579	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG01258_ch_T0000648;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000648;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000648:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000649;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20974793	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000649:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20974794	20976468	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000649:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20976469	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000649:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977262	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000649:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977263	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000649:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20986220	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000649:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20986221	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG01258_ch_T0000649;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000649;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000649:3;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000650;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000650;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000650:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977262	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000650;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000650:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977263	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000650;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000650:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20978578	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000650;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000650:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20978579	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG01258_ch_T0000650;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000650;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000650:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20973138	20986248	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_G0000241;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG01258_ch_T0000651;Name=LOC105377223
HG01258_chrY	CAT	exon	20973138	20976528	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000651;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000651:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20976529	20977262	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000651;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000651:0;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20977263	20977379	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000651;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000651:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20977380	20986220	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000651;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG01258_ch_T0000651:1;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	20986221	20986248	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG01258_ch_T0000651;gene_id=HG01258_ch_G0000241;Parent=HG01258_ch_T0000651;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG01258_ch_T0000651:2;Name=LOC105377223;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	20986597	21026412	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG01258_ch_G0000242;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG01258_ch_G0000242;Name=TXLNGY
HG01258_chrY	CAT	transcript	20986597	21009663	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_G0000242;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG01258_ch_T0000652;Name=TXLNGY
HG01258_chrY	CAT	exon	20986597	20986721	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000652:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20986722	21006449	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000652:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21006450	21006747	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000652:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21006748	21008760	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000652:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21008761	21008852	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000652:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21008853	21009322	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000652:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21009323	21009663	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG01258_ch_T0000652;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000652;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000652:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	20986597	21026412	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_G0000242;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG01258_ch_T0000653;Name=TXLNGY
HG01258_chrY	CAT	exon	20986597	20986721	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	20986722	21006449	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:0;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21006450	21006747	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21006748	21008760	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:1;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21008761	21008852	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21008853	21011019	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:2;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21011020	21011199	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21011200	21012638	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:3;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21012639	21012833	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:4;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21012834	21015254	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:4;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21015255	21015374	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:5;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21015375	21016832	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:5;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21016833	21016907	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:6;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21016908	21018980	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:6;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21018981	21019073	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:7;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21019074	21021457	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:7;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21021458	21021553	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:8;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21021554	21023038	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG01258_ch_T0000653:8;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21023039	21026412	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG01258_ch_T0000653;gene_id=HG01258_ch_G0000242;Parent=HG01258_ch_T0000653;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG01258_ch_T0000653:9;Name=TXLNGY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	21123101	21163962	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG01258_ch_G0000243;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000243;Name=KDM5D
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000654;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000654;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21142576	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21142577	21142669	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21142577	21142669	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21142670	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000654:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000654;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000654:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000654;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000654;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000654:27;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000655;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000655;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127557	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127558	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127558	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21128814	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21128814	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128815	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000655:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000655;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000655:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000655;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000655;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000655:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000656;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000656;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21128814	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21128814	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128815	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000656:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000656;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000656:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000656;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000656;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000656:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000657;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000657;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127557	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127558	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127558	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21128814	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21128814	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128815	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000657:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000657;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000657:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000657;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000657;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000657:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000658;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000658;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000658:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000658;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000658:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000658;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000658;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000658:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000659;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000659;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000659:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000659;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000659:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000659;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000659;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000659:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000660;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000660;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000660:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000660;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000660:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000660;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000660;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000660:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000661;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000661;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21128814	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21128814	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128815	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000661:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000661;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000661:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000661;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000661;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000661:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000662;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000662;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127557	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127558	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127558	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000662:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000662;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000662:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000662;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000662;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000662:26;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21123101	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000663;Name=KDM5D
HG01258_chrY	CAT	exon	21123101	21125581	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125231	21125581	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125231	21125233	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000663;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125582	21125676	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21125677	21125876	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125677	21125876	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125877	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127557	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127558	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127558	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000663:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000663;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000663:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000663;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000663;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000663:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21125714	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000664;Name=KDM5D
HG01258_chrY	CAT	exon	21125714	21125844	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21125816	21125844	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21125816	21125818	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000664;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21125845	21126029	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126030	21126099	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126030	21126099	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126100	21126382	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21126383	21126982	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21126383	21126982	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21126983	21127169	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127170	21127307	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127170	21127307	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127308	21127479	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21127480	21127659	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21127480	21127659	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21127660	21128110	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128111	21128249	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128111	21128249	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21128250	21128686	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21128687	21129045	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21128687	21129045	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129046	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:20;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:21;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:22;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:23;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000664:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000664;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000664:24;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000664;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000664;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000664:25;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21128696	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000665;Name=KDM5D
HG01258_chrY	CAT	exon	21128696	21129496	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129413	21129496	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21129413	21129415	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000665;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129497	21129611	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21129612	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21129612	21129708	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134587	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134588	21134735	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134588	21134735	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134736	21134850	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134851	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134851	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000665:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000665;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000665:18;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000665;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000665;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000665:19;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21129636	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000666;Name=KDM5D
HG01258_chrY	CAT	exon	21129636	21129708	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21129709	21134819	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21134820	21134975	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21134843	21134975	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21134843	21134845	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000666;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21134976	21135058	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135059	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135059	21135240	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000666:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000666;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000666:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000666;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000666;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000666:17;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21135107	21163962	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_G0000243;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG01258_ch_T0000667;Name=KDM5D
HG01258_chrY	CAT	exon	21135107	21135240	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135224	21135240	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21135224	21135226	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG01258_ch_T0000667;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135241	21135334	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:0;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135335	21135347	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135335	21135347	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135348	21135514	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:1;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135515	21135709	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135515	21135709	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135710	21135831	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:2;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21135832	21135951	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21135832	21135951	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21135952	21140107	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:3;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140108	21140270	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140108	21140270	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140271	21140365	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:4;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21140366	21140547	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21140366	21140547	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21140548	21151007	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:5;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151008	21151166	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151008	21151166	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151167	21151281	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:6;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151282	21151401	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151282	21151401	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151402	21151819	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:7;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21151820	21151978	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21151820	21151978	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21151979	21154587	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:8;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154588	21154733	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154588	21154733	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154734	21154856	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:9;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21154857	21154986	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21154857	21154986	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21154987	21158763	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:10;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21158764	21158898	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21158764	21158898	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21158899	21160553	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:11;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160554	21160724	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160554	21160724	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21160725	21160970	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:12;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21160971	21161093	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21160971	21161093	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21161094	21162397	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:13;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21162398	21162475	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21162398	21162475	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21162476	21163620	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:14;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163621	21163789	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21163621	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG01258_ch_T0000667:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21163768	21163770	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG01258_ch_T0000667;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21163790	21163906	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG01258_ch_T0000667:15;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21163907	21163962	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000667;gene_id=HG01258_ch_G0000243;Parent=HG01258_ch_T0000667;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG01258_ch_T0000667:16;Name=KDM5D;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	21163992	21176685	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG01258_ch_G0000244;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG01258_ch_G0000244;Name=LOC105377224
HG01258_chrY	CAT	transcript	21163992	21176792	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_G0000244;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01258_ch_T0000668;Name=LOC105377224
HG01258_chrY	CAT	exon	21163992	21164949	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000668;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000668:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21164950	21173861	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000668;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000668:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21173862	21174051	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000668;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000668:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21174052	21174440	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000668;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000668:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21174441	21176792	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG01258_ch_T0000668;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000668;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000668:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21164021	21178307	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_G0000244;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01258_ch_T0000669;Name=LOC105377224
HG01258_chrY	CAT	exon	21164021	21164949	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000669;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000669:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21164950	21173962	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000669;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000669:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21173963	21174051	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000669;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000669:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21174052	21174440	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000669;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000669:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21174441	21178307	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG01258_ch_T0000669;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000669;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000669:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21164074	21176685	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_G0000244;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG01258_ch_T0000670;Name=LOC105377224
HG01258_chrY	CAT	exon	21164074	21164949	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000670:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21164950	21173962	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000670:0;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21173963	21174051	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000670:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21174052	21174440	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000670:1;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21174441	21174560	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000670:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21174561	21175878	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG01258_ch_T0000670:2;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21175879	21176685	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG01258_ch_T0000670;gene_id=HG01258_ch_G0000244;Parent=HG01258_ch_T0000670;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG01258_ch_T0000670:3;Name=LOC105377224;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	21848659	21902203	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG01258_ch_G0000245;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG01258_ch_G0000245;Name=TTTY10
HG01258_chrY	CAT	transcript	21848659	21902203	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_G0000245;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG01258_ch_T0000671;Name=TTTY10
HG01258_chrY	CAT	exon	21848659	21848813	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:0;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21848814	21849418	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01258_ch_T0000671:0;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21849419	21849658	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:1;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21849659	21851179	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01258_ch_T0000671:1;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21851180	21851239	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:2;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21851240	21852862	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01258_ch_T0000671:2;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21852863	21852972	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:3;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21852973	21890326	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01258_ch_T0000671:3;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21890327	21890431	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:4;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21890432	21901245	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG01258_ch_T0000671:4;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21901246	21902203	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG01258_ch_T0000671;gene_id=HG01258_ch_G0000245;Parent=HG01258_ch_T0000671;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG01258_ch_T0000671:5;Name=TTTY10;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	21958750	21976129	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG01258_ch_G0000246;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000246;Name=EIF1AY
HG01258_chrY	CAT	transcript	21958750	21976129	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_G0000246;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG01258_ch_T0000672;Name=EIF1AY
HG01258_chrY	CAT	exon	21958750	21958861	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21958846	21958861	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21958846	21958848	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG01258_ch_T0000672;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21958862	21962581	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000672:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21962582	21962665	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21962582	21962665	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21962666	21965563	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000672:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21965564	21965667	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21965564	21965667	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21965668	21970998	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000672:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21970999	21971080	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21970999	21971080	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21971081	21972458	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000672:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21972459	21972550	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21972459	21972550	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21972551	21975315	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000672:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21975316	21976129	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000672:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21975316	21975321	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000672:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21975319	21975321	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000672;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000672;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG01258_ch_T0000672;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	21958750	21976129	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_G0000246;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG01258_ch_T0000673;Name=EIF1AY
HG01258_chrY	CAT	exon	21958750	21958861	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21958846	21958861	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	21958846	21958848	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG01258_ch_T0000673;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21958862	21962581	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:0;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21962582	21962665	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21962582	21962665	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21962666	21965563	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:1;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21965564	21965667	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21965564	21965667	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21965668	21967448	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:2;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21967449	21967499	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21967449	21967499	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21967500	21970998	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:3;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21970999	21971080	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21970999	21971080	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21971081	21972458	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:4;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21972459	21972550	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21972459	21972550	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	21972551	21975315	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG01258_ch_T0000673:5;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	21975316	21976129	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG01258_ch_T0000673:6;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	21975316	21975321	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG01258_ch_T0000673:6;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	21975319	21975321	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000673;gene_id=HG01258_ch_G0000246;Parent=HG01258_ch_T0000673;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG01258_ch_T0000673;Name=EIF1AY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22139091	22164015	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG01258_ch_G0000247;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000247;Name=RPS4Y2
HG01258_chrY	CAT	transcript	22139091	22164015	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_G0000247;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG01258_ch_T0000674;Name=RPS4Y2
HG01258_chrY	CAT	exon	22139091	22139149	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22139147	22139149	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22139147	22139149	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG01258_ch_T0000674;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22139150	22139760	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22139761	22139838	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22139761	22139838	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22139839	22142850	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22142851	22143031	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22142851	22143031	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22143032	22144266	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22144267	22144364	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22144267	22144364	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22144365	22151787	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22151788	22151959	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22151788	22151959	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22151960	22162491	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22162492	22162649	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22162492	22162649	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22162650	22163913	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG01258_ch_T0000674:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22163914	22164015	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG01258_ch_T0000674:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22163914	22164015	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG01258_ch_T0000674:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22164013	22164015	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000674;gene_id=HG01258_ch_G0000247;Parent=HG01258_ch_T0000674;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG01258_ch_T0000674;Name=RPS4Y2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22521679	22556019	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG01258_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG01258_ch_G0000248;Name=LOC105377225
HG01258_chrY	CAT	transcript	22521679	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000675;Name=LOC105377225
HG01258_chrY	CAT	exon	22521679	22521914	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22521915	22531224	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000675:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531225	22531275	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531276	22531467	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000675:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531468	22531562	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531563	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000675:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000675:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000675:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG01258_ch_T0000675;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000675;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000675:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22521679	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000676;Name=LOC105377225
HG01258_chrY	CAT	exon	22521679	22521914	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000676:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22521915	22531467	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000676:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531468	22531562	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000676:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531563	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000676:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000676:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000676:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000676:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000676:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG01258_ch_T0000676;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000676;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000676:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22521679	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000677;Name=LOC105377225
HG01258_chrY	CAT	exon	22521679	22521914	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000677:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22521915	22531590	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000677:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531591	22531644	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000677:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531645	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000677:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000677:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000677:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000677:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000677:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG01258_ch_T0000677;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000677;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000677:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22521679	22556019	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000678;Name=LOC105377225
HG01258_chrY	CAT	exon	22521679	22521914	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22521915	22527828	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22527829	22527920	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22527921	22531224	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531225	22531275	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531276	22531467	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531468	22531562	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531563	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000678:5;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22556019	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG01258_ch_T0000678;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000678;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000678:6;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22527088	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000679;Name=LOC105377225
HG01258_chrY	CAT	exon	22527088	22531275	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000679:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531276	22531467	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000679:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531468	22531644	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000679:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531645	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000679:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000679:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000679:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000679:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000679:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG01258_ch_T0000679;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000679;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000679:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22527088	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000680;Name=LOC105377225
HG01258_chrY	CAT	exon	22527088	22531275	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000680:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531276	22531590	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000680:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531591	22531644	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000680:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531645	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000680:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000680:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535879	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000680:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535880	22536014	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000680:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22536015	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000680:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG01258_ch_T0000680;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000680;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000680:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22527088	22553264	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_G0000248;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG01258_ch_T0000681;Name=LOC105377225
HG01258_chrY	CAT	exon	22527088	22531275	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000681:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531276	22531467	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000681:0;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22531468	22531644	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000681:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22531645	22534629	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000681:1;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22534630	22534683	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000681:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22534684	22535720	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000681:2;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22535721	22535812	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000681:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22535813	22553000	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG01258_ch_T0000681:3;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22553001	22553264	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG01258_ch_T0000681;gene_id=HG01258_ch_G0000248;Parent=HG01258_ch_T0000681;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG01258_ch_T0000681:4;Name=LOC105377225;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22611183	22636419	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG01258_ch_G0000249;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG01258_ch_G0000249;Name=LOC107987346
HG01258_chrY	CAT	transcript	22611183	22636419	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_G0000249;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG01258_ch_T0000682;Name=LOC107987346
HG01258_chrY	CAT	exon	22611183	22611220	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000682;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000682:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22611221	22611397	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000682;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01258_ch_T0000682:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22611398	22611505	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000682;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000682:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22611506	22633594	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000682;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01258_ch_T0000682:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22633595	22636419	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG01258_ch_T0000682;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000682;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000682:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22611183	22636419	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_G0000249;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG01258_ch_T0000683;Name=LOC107987346
HG01258_chrY	CAT	exon	22611183	22611220	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000683:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22611221	22611397	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01258_ch_T0000683:0;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22611398	22611505	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000683:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22611506	22633594	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01258_ch_T0000683:1;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22633595	22633753	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000683:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22633754	22636167	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG01258_ch_T0000683:2;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22636168	22636419	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG01258_ch_T0000683;gene_id=HG01258_ch_G0000249;Parent=HG01258_ch_T0000683;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG01258_ch_T0000683:3;Name=LOC107987346;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22631110	22686051	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG01258_ch_G0000250;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG01258_ch_G0000250;Name=LOC107987347
HG01258_chrY	CAT	transcript	22631110	22686051	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_G0000250;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG01258_ch_T0000684;Name=LOC107987347
HG01258_chrY	CAT	exon	22631110	22632195	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_T0000684;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01258_ch_T0000684:0;Name=LOC107987347;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22632196	22679195	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_T0000684;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG01258_ch_T0000684:0;Name=LOC107987347;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22679196	22679261	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_T0000684;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01258_ch_T0000684:1;Name=LOC107987347;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22679262	22685601	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_T0000684;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG01258_ch_T0000684:1;Name=LOC107987347;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22685602	22686051	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG01258_ch_T0000684;gene_id=HG01258_ch_G0000250;Parent=HG01258_ch_T0000684;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG01258_ch_T0000684:2;Name=LOC107987347;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22764956	22834901	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG01258_ch_G0000251;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG01258_ch_G0000251;Name=PRORY
HG01258_chrY	CAT	transcript	22764956	22834901	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_G0000251;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG01258_ch_T0000685;Name=PRORY
HG01258_chrY	CAT	exon	22764956	22766330	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01258_ch_T0000685:0;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22766331	22766481	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01258_ch_T0000685:0;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22766482	22766846	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01258_ch_T0000685:1;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22766847	22766962	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01258_ch_T0000685:1;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22766963	22767019	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01258_ch_T0000685:2;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22767020	22769281	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01258_ch_T0000685:2;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22769282	22769406	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01258_ch_T0000685:3;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22769407	22834698	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG01258_ch_T0000685:3;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22834699	22834901	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG01258_ch_T0000685;gene_id=HG01258_ch_G0000251;Parent=HG01258_ch_T0000685;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG01258_ch_T0000685:4;Name=PRORY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22778202	22784616	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG01258_ch_G0000252;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG01258_ch_G0000252;Name=RBMY2EP
HG01258_chrY	CAT	transcript	22778202	22784616	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_G0000252;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG01258_ch_T0000686;Name=RBMY2EP
HG01258_chrY	CAT	exon	22778202	22778345	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01258_ch_T0000686:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22778346	22778753	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01258_ch_T0000686:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22778754	22778842	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01258_ch_T0000686:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22778843	22778924	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01258_ch_T0000686:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22778925	22779035	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01258_ch_T0000686:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22779036	22783976	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01258_ch_T0000686:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22783977	22784080	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01258_ch_T0000686:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22784081	22784530	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG01258_ch_T0000686:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22784531	22784616	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG01258_ch_T0000686;gene_id=HG01258_ch_G0000252;Parent=HG01258_ch_T0000686;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG01258_ch_T0000686:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22894393	22908829	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=HG01258_ch_G0000253;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000253;Name=RBMY1A1
HG01258_chrY	CAT	transcript	22894393	22907841	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_G0000253;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000687;Name=RBMY1A1
HG01258_chrY	CAT	exon	22894393	22894540	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22894541	22896401	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896402	22896514	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896406	22896514	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22896406	22896408	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000687;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22896515	22896976	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896977	22897080	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896977	22897080	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22897081	22900099	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22900100	22900277	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22900100	22900277	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22900278	22902192	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22902193	22902345	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22902193	22902345	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22902346	22904355	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22904356	22904470	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22904356	22904470	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22904471	22905425	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905426	22905536	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905426	22905536	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22905537	22905977	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905978	22906088	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905978	22906088	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906089	22906522	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22906523	22906633	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22906523	22906633	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906634	22907554	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907555	22907665	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907555	22907665	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907666	22907752	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000687:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907753	22907841	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000687:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907753	22907840	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000687:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22907838	22907840	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000687;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000687;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000687;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22894393	22908829	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_G0000253;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000688;Name=RBMY1A1
HG01258_chrY	CAT	exon	22894393	22894540	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22894541	22896401	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896402	22896514	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896406	22896514	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22896406	22896408	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000688;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22896515	22896976	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896977	22897080	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896977	22897080	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22897081	22900099	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22900100	22900277	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22900100	22900277	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22900278	22902192	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22902193	22902345	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22902193	22902345	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22902346	22904355	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22904356	22904470	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22904356	22904470	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22904471	22905425	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905426	22905536	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905426	22905536	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22905537	22905977	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905978	22906088	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905978	22906088	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906089	22906522	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22906523	22906633	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22906523	22906633	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906634	22907752	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907753	22907841	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907753	22907841	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907842	22908252	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000688:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22908253	22908829	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000688:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22908253	22908551	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000688:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22908549	22908551	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000688;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000688;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000688;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22894393	22908829	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_G0000253;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000689;Name=RBMY1A1
HG01258_chrY	CAT	exon	22894393	22894540	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22894541	22896401	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896402	22896514	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22896515	22896976	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896977	22897080	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22897081	22902192	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22902193	22902345	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22902222	22902345	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22902222	22902224	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000689;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22902346	22904355	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22904356	22904470	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22904356	22904470	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22904471	22905425	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905426	22905536	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905426	22905536	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22905537	22905977	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905978	22906088	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905978	22906088	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906089	22906522	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22906523	22906633	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22906523	22906633	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906634	22907554	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907555	22907665	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907555	22907665	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907666	22907752	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907753	22907841	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907753	22907841	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907842	22908252	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000689:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22908253	22908829	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000689:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22908253	22908551	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000689:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22908549	22908551	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000689;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000689;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000689;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22894393	22908829	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_G0000253;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000690;Name=RBMY1A1
HG01258_chrY	CAT	exon	22894393	22894540	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22894541	22896401	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896402	22896514	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896406	22896514	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22896406	22896408	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000690;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22896515	22896976	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22896977	22897080	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22896977	22897080	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22897081	22900099	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22900100	22900277	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22900100	22900277	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22900278	22902192	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22902193	22902345	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22902193	22902345	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22902346	22904355	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22904356	22904470	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22904356	22904470	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22904471	22905425	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905426	22905536	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905426	22905536	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22905537	22905977	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22905978	22906088	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22905978	22906088	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906089	22906522	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22906523	22906633	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22906523	22906633	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22906634	22907554	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907555	22907665	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907555	22907665	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907666	22907752	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22907753	22907841	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22907753	22907841	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22907842	22908252	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000690:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22908253	22908829	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000690:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22908253	22908551	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000690:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22908549	22908551	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000690;gene_id=HG01258_ch_G0000253;Parent=HG01258_ch_T0000690;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000690;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22911701	22944014	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG01258_ch_G0000254;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000254;Name=RBMY1D
HG01258_chrY	CAT	transcript	22911701	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000691;Name=RBMY1D
HG01258_chrY	CAT	exon	22911701	22911721	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22911722	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000691;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931092	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931093	22931203	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931093	22931203	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931204	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000691:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000691:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000691:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000691;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000691;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000691;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000692;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000692;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931092	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931093	22931203	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931093	22931203	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931204	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000692:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000692:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000692:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000692;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000692;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000692;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000693;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000693;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000693:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000693:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000693:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000693;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000693;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000693;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000694;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22918741	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22918742	22918806	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918807	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919992	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919992	22919994	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000694;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920528	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920529	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920529	22920618	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000694:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000694:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000694:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000694;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000694;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000694;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000695;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000695;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000695:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000695:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000695:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000695;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000695;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000695;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22933785	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000696;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000696;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931092	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931093	22931203	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931093	22931203	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931204	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22932626	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000696:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22932627	22933785	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000696:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22932627	22932634	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000696:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932632	22932634	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000696;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000696;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000696;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22917921	22944014	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000697;Name=RBMY1D
HG01258_chrY	CAT	exon	22917921	22918068	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22918069	22919929	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22919930	22920042	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22919934	22920042	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22919934	22919936	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000697;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920043	22920514	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22920515	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22920515	22920618	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22923637	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22923638	22923815	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22923638	22923815	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22923816	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925731	22925883	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931092	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931093	22931203	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931093	22931203	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931204	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:9;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22942630	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000697:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22942631	22944014	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000697:11;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22942631	22942707	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000697:10;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22942705	22942707	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000697;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000697;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000697;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	22920529	22932367	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_G0000254;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG01258_ch_T0000698;Name=RBMY1D
HG01258_chrY	CAT	exon	22920529	22920618	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22920619	22925730	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22925731	22925883	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22925760	22925883	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:0;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	22925760	22925762	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG01258_ch_T0000698;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22925884	22927893	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22927894	22928008	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22927894	22928008	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:1;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22928009	22928963	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22928964	22929074	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22928964	22929074	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:2;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929075	22929515	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22929516	22929626	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22929516	22929626	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:3;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22929627	22930060	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22930061	22930171	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22930061	22930171	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:4;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22930172	22931092	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931093	22931203	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931093	22931203	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:5;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931204	22931290	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931291	22931379	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931291	22931379	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:6;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22931380	22931790	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG01258_ch_T0000698:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22931791	22932367	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG01258_ch_T0000698:8;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	22931791	22932089	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG01258_ch_T0000698:7;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	22932087	22932089	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000698;gene_id=HG01258_ch_G0000254;Parent=HG01258_ch_T0000698;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG01258_ch_T0000698;Name=RBMY1D;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22952074	22954327	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG01258_ch_G0000255;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG01258_ch_G0000255;Name=LOC105379266
HG01258_chrY	CAT	transcript	22952074	22954327	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000699;gene_id=HG01258_ch_G0000255;Parent=HG01258_ch_G0000255;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG01258_ch_T0000699;Name=LOC105379266
HG01258_chrY	CAT	exon	22952074	22953354	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000699;gene_id=HG01258_ch_G0000255;Parent=HG01258_ch_T0000699;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG01258_ch_T0000699:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22953355	22954032	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000699;gene_id=HG01258_ch_G0000255;Parent=HG01258_ch_T0000699;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG01258_ch_T0000699:0;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22954033	22954327	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG01258_ch_T0000699;gene_id=HG01258_ch_G0000255;Parent=HG01258_ch_T0000699;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG01258_ch_T0000699:1;Name=LOC105379266;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	22966634	22977700	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG01258_ch_G0000256;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG01258_ch_G0000256;Name=TTTY13
HG01258_chrY	CAT	transcript	22966634	22977700	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_G0000256;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG01258_ch_T0000700;Name=TTTY13
HG01258_chrY	CAT	exon	22966634	22966696	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:0;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22966697	22967816	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01258_ch_T0000700:0;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22967817	22967908	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:1;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22967909	22970534	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01258_ch_T0000700:1;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22970535	22970696	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:2;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22970697	22972305	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01258_ch_T0000700:2;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22972306	22972404	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:3;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22972405	22972999	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01258_ch_T0000700:3;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22973000	22973161	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:4;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	22973162	22977619	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG01258_ch_T0000700:4;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	22977620	22977700	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG01258_ch_T0000700;gene_id=HG01258_ch_G0000256;Parent=HG01258_ch_T0000700;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG01258_ch_T0000700:5;Name=TTTY13;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23152471	23167123	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG01258_ch_G0000257;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG01258_ch_G0000257;Name=LOC105377236
HG01258_chrY	CAT	transcript	23152471	23165895	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_G0000257;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01258_ch_T0000701;Name=LOC105377236
HG01258_chrY	CAT	exon	23152471	23154014	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000701:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23154015	23161393	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000701:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23161394	23161529	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000701:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23161530	23164524	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000701:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164525	23164686	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000701:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23164687	23164930	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000701:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164931	23165895	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG01258_ch_T0000701;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000701;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000701:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23152471	23165895	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_G0000257;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01258_ch_T0000702;Name=LOC105377236
HG01258_chrY	CAT	exon	23152471	23154014	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000702:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23154015	23161393	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000702:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23161394	23161529	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000702:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23161530	23164524	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000702:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164525	23164599	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000702:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23164600	23164930	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000702:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164931	23165895	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG01258_ch_T0000702;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000702;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000702:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23152471	23167123	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_G0000257;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG01258_ch_T0000703;Name=LOC105377236
HG01258_chrY	CAT	exon	23152471	23154014	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000703:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23154015	23161393	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000703:0;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23161394	23161529	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000703:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23161530	23164524	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000703:1;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164525	23164686	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000703:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23164687	23164930	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000703:2;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23164931	23165716	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000703:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23165717	23166967	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG01258_ch_T0000703:3;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23166968	23167123	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG01258_ch_T0000703;gene_id=HG01258_ch_G0000257;Parent=HG01258_ch_T0000703;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG01258_ch_T0000703:4;Name=LOC105377236;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23179586	23182474	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG01258_ch_G0000258;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG01258_ch_G0000258;Name=LOC105377237
HG01258_chrY	CAT	transcript	23179586	23182474	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_G0000258;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG01258_ch_T0000704;Name=LOC105377237
HG01258_chrY	CAT	exon	23179586	23180823	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_T0000704;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01258_ch_T0000704:0;Name=LOC105377237;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23180824	23181995	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_T0000704;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG01258_ch_T0000704:0;Name=LOC105377237;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23181996	23182155	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_T0000704;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01258_ch_T0000704:1;Name=LOC105377237;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23182156	23182315	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_T0000704;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG01258_ch_T0000704:1;Name=LOC105377237;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23182316	23182474	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG01258_ch_T0000704;gene_id=HG01258_ch_G0000258;Parent=HG01258_ch_T0000704;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG01258_ch_T0000704:2;Name=LOC105377237;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23223405	23237841	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=HG01258_ch_G0000259;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000259;Name=RBMY1A1
HG01258_chrY	CAT	transcript	23223405	23237841	1000	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_G0000259;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000705;Name=RBMY1A1
HG01258_chrY	CAT	exon	23223405	23223981	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23223683	23223981	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23223683	23223685	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000705;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23223982	23224392	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224393	23224481	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224393	23224481	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224482	23225600	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23225601	23225711	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23225601	23225711	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23225712	23226145	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226146	23226256	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226146	23226256	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226257	23226697	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226698	23226808	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226698	23226808	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226809	23227763	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23227764	23227878	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23227764	23227878	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23227879	23229888	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23229889	23230041	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23229889	23230041	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23230042	23231956	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23231957	23232134	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23231957	23232134	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23232135	23235153	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235154	23235257	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235154	23235257	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235258	23235719	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235720	23235832	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235720	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000705:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23235826	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000705;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235833	23237693	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000705:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23237694	23237841	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000705;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000705;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000705:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23223405	23237841	1000	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_G0000259;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000706;Name=RBMY1A1
HG01258_chrY	CAT	exon	23223405	23223981	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23223683	23223981	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23223683	23223685	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000706;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23223982	23224392	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224393	23224481	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224393	23224481	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224482	23224568	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224569	23224679	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224569	23224679	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224680	23225600	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23225601	23225711	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23225601	23225711	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23225712	23226145	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226146	23226256	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226146	23226256	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226257	23226697	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226698	23226808	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226698	23226808	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226809	23227763	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23227764	23227878	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23227764	23227878	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23227879	23229888	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23229889	23230041	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23229889	23230012	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000706:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23230010	23230012	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000706;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23230042	23235153	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235154	23235257	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235258	23235719	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235720	23235832	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235833	23237693	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000706:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23237694	23237841	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000706;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000706;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000706:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23223405	23237841	1000	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_G0000259;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000707;Name=RBMY1A1
HG01258_chrY	CAT	exon	23223405	23223981	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23223683	23223981	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23223683	23223685	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000707;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23223982	23224392	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224393	23224481	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224393	23224481	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224482	23224568	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224569	23224679	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224569	23224679	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224680	23225600	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23225601	23225711	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23225601	23225711	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23225712	23226145	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226146	23226256	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226146	23226256	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226257	23226697	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226698	23226808	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226698	23226808	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226809	23227763	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23227764	23227878	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23227764	23227878	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23227879	23229888	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23229889	23230041	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23229889	23230041	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23230042	23231956	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23231957	23232134	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23231957	23232134	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23232135	23235153	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235154	23235257	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235154	23235257	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235258	23235719	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235720	23235832	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235720	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000707:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23235826	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000707;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235833	23237693	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000707:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23237694	23237841	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000707;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000707;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000707:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23224393	23237841	1000	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_G0000259;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG01258_ch_T0000708;Name=RBMY1A1
HG01258_chrY	CAT	exon	23224393	23224481	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224394	23224481	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23224394	23224396	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG01258_ch_T0000708;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224482	23224568	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23224569	23224679	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23224569	23224679	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23224680	23225600	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23225601	23225711	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23225601	23225711	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23225712	23226145	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226146	23226256	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226146	23226256	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226257	23226697	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23226698	23226808	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23226698	23226808	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23226809	23227763	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23227764	23227878	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23227764	23227878	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23227879	23229888	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23229889	23230041	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23229889	23230041	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23230042	23231956	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23231957	23232134	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23231957	23232134	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23232135	23235153	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235154	23235257	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235154	23235257	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235258	23235719	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23235720	23235832	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23235720	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG01258_ch_T0000708:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23235826	23235828	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG01258_ch_T0000708;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23235833	23237693	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG01258_ch_T0000708:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23237694	23237841	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000708;gene_id=HG01258_ch_G0000259;Parent=HG01258_ch_T0000708;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG01258_ch_T0000708:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23245493	23261340	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG01258_ch_G0000260;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000260;Name=RBMY1E
HG01258_chrY	CAT	transcript	23245493	23261340	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_G0000260;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01258_ch_T0000709;Name=RBMY1E
HG01258_chrY	CAT	exon	23245493	23246674	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23246667	23246674	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23246667	23246669	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01258_ch_T0000709;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23246675	23247921	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23247922	23248010	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247922	23248010	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248011	23248096	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23248097	23248207	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23248097	23248207	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248208	23249128	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249129	23249239	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249129	23249239	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249240	23249673	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249674	23249784	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249674	23249784	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249785	23250225	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23250226	23250336	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23250226	23250336	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23250337	23251291	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23251292	23251406	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23251292	23251406	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23251407	23253416	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23253417	23253569	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23253417	23253569	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23253570	23255484	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23255485	23255662	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23255485	23255662	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23255663	23258681	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23258682	23258785	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23258682	23258785	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23258786	23259249	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23259250	23259362	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23259250	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000709:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23259356	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01258_ch_T0000709;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23259363	23261223	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000709:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23261224	23261340	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000709;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000709;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000709:11;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23246938	23258772	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_G0000260;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01258_ch_T0000710;Name=RBMY1E
HG01258_chrY	CAT	exon	23246938	23247510	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247212	23247510	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23247212	23247214	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01258_ch_T0000710;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23247511	23247921	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23247922	23248010	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247922	23248010	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248011	23248096	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23248097	23248207	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23248097	23248207	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248208	23249128	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249129	23249239	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249129	23249239	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249240	23249673	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249674	23249784	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249674	23249784	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249785	23250225	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23250226	23250336	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23250226	23250336	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23250337	23251291	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23251292	23251406	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23251292	23251406	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23251407	23253416	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23253417	23253569	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23253417	23253540	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000710:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23253538	23253540	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01258_ch_T0000710;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23253570	23258681	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000710:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23258682	23258772	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000710;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000710;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000710:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23246938	23261340	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_G0000260;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01258_ch_T0000711;Name=RBMY1E
HG01258_chrY	CAT	exon	23246938	23247510	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247212	23247510	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23247212	23247214	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01258_ch_T0000711;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23247511	23247921	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23247922	23248010	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247922	23248010	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248011	23248096	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23248097	23248207	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23248097	23248207	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248208	23249128	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249129	23249239	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249129	23249239	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249240	23249673	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249674	23249784	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249674	23249784	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249785	23250225	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23250226	23250336	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23250226	23250336	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23250337	23251291	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23251292	23251406	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23251292	23251406	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23251407	23253416	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23253417	23253569	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23253417	23253569	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23253570	23255484	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23255485	23255662	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23255485	23255662	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23255663	23258681	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23258682	23258785	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23258682	23258785	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23258786	23259249	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23259250	23259362	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23259250	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000711:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23259356	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01258_ch_T0000711;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23259363	23261223	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000711:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23261224	23261340	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000711;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000711;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000711:11;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23246938	23261340	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_G0000260;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01258_ch_T0000712;Name=RBMY1E
HG01258_chrY	CAT	exon	23246938	23247510	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247212	23247510	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23247212	23247214	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01258_ch_T0000712;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23247511	23247921	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23247922	23248010	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247922	23248010	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248011	23249128	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249129	23249239	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249129	23249239	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249240	23249673	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23249674	23249784	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23249674	23249784	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23249785	23250225	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23250226	23250336	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23250226	23250336	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23250337	23251291	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23251292	23251406	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23251292	23251406	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23251407	23253416	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23253417	23253569	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23253417	23253569	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23253570	23255484	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23255485	23255662	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23255485	23255662	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23255663	23258681	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23258682	23258785	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23258682	23258785	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23258786	23259249	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23259250	23259362	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23259250	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000712:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23259356	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01258_ch_T0000712;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23259363	23261223	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000712:9;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23261224	23261340	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000712;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000712;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000712:10;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23246938	23261340	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_G0000260;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG01258_ch_T0000713;Name=RBMY1E
HG01258_chrY	CAT	exon	23246938	23247510	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247212	23247510	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23247212	23247214	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG01258_ch_T0000713;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23247511	23247921	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:0;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23247922	23248010	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23247922	23248010	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23248011	23250225	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:1;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23250226	23250336	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23250226	23250336	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23250337	23251291	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:2;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23251292	23251406	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23251292	23251406	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23251407	23253416	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:3;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23253417	23253569	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23253417	23253569	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23253570	23255484	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:4;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23255485	23255662	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23255485	23255662	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23255663	23258681	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:5;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23258682	23258785	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23258682	23258785	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23258786	23259249	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:6;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23259250	23259362	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23259250	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG01258_ch_T0000713:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23259356	23259358	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG01258_ch_T0000713;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23259363	23261223	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG01258_ch_T0000713:7;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23261224	23261340	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000713;gene_id=HG01258_ch_G0000260;Parent=HG01258_ch_T0000713;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG01258_ch_T0000713:8;Name=RBMY1E;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23371655	23373682	.	+	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;gene_id=HG01258_ch_G0000261;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG01258_ch_G0000261;Name=LOC107987356
HG01258_chrY	CAT	transcript	23371655	23373682	1000	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_G0000261;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG01258_ch_T0000714;Name=LOC107987356
HG01258_chrY	CAT	exon	23371655	23371767	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_T0000714;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01258_ch_T0000714:0;Name=LOC107987356;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23371768	23371884	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_T0000714;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG01258_ch_T0000714:0;Name=LOC107987356;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23371885	23371945	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_T0000714;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01258_ch_T0000714:1;Name=LOC107987356;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23371946	23373480	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_T0000714;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG01258_ch_T0000714:1;Name=LOC107987356;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23373481	23373682	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG01258_ch_T0000714;gene_id=HG01258_ch_G0000261;Parent=HG01258_ch_T0000714;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG01258_ch_T0000714:2;Name=LOC107987356;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23415093	23439335	.	-	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;gene_id=HG01258_ch_G0000262;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000262;Name=PRY
HG01258_chrY	CAT	transcript	23415093	23439335	100	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_G0000262;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG01258_ch_T0000715;Name=PRY
HG01258_chrY	CAT	exon	23415093	23415918	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01258_ch_T0000715:0;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23415660	23415918	.	-	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01258_ch_T0000715:0;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23415660	23415662	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG01258_ch_T0000715;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23415919	23425405	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01258_ch_T0000715:0;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23425406	23425521	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01258_ch_T0000715:1;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23425406	23425521	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01258_ch_T0000715:1;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23425522	23428096	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01258_ch_T0000715:1;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23428097	23428217	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01258_ch_T0000715:2;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23428097	23428165	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG01258_ch_T0000715:2;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23428163	23428165	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG01258_ch_T0000715;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23428218	23439059	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01258_ch_T0000715:2;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23439060	23439146	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01258_ch_T0000715:3;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23439147	23439247	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG01258_ch_T0000715:3;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23439248	23439335	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000715;gene_id=HG01258_ch_G0000262;Parent=HG01258_ch_T0000715;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG01258_ch_T0000715:4;Name=PRY;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23445041	23490876	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;gene_id=HG01258_ch_G0000263;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG01258_ch_G0000263;Name=LOC102725532
HG01258_chrY	CAT	transcript	23445041	23490876	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_G0000263;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG01258_ch_T0000716;Name=LOC102725532
HG01258_chrY	CAT	exon	23445041	23445718	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:0;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23445719	23446233	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:0;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23446234	23446351	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:1;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23446352	23446895	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:1;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23446896	23447092	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:2;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23447093	23447212	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:2;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23447213	23447298	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:3;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23447299	23449098	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:3;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23449099	23449434	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:4;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23449435	23450900	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:4;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23450901	23450990	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:5;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23450991	23464619	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:5;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23464620	23464973	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:6;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23464974	23465403	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:6;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23465404	23465522	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:7;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23465523	23472700	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:7;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23472701	23472786	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:8;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23472787	23473094	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:8;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23473095	23473317	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:9;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23473318	23483285	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:9;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23483286	23483426	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:10;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23483427	23489975	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:10;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23489976	23490285	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:11;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23490286	23490619	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG01258_ch_T0000716:11;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23490620	23490876	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=HG01258_ch_T0000716;gene_id=HG01258_ch_G0000263;Parent=HG01258_ch_T0000716;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG01258_ch_T0000716:12;Name=LOC102725532;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23488323	23490170	.	+	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;gene_id=HG01258_ch_G0000264;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG01258_ch_G0000264;Name=TTTY6B
HG01258_chrY	CAT	transcript	23488323	23490170	1000	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_G0000264;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG01258_ch_T0000717;Name=TTTY6B
HG01258_chrY	CAT	exon	23488323	23488415	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_T0000717;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01258_ch_T0000717:0;Name=TTTY6B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23488416	23488633	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_T0000717;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG01258_ch_T0000717:0;Name=TTTY6B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23488634	23488771	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_T0000717;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01258_ch_T0000717:1;Name=TTTY6B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23488772	23489928	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_T0000717;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG01258_ch_T0000717:1;Name=TTTY6B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23489929	23490170	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=HG01258_ch_T0000717;gene_id=HG01258_ch_G0000264;Parent=HG01258_ch_T0000717;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG01258_ch_T0000717:2;Name=TTTY6B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23504890	23526351	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;gene_id=HG01258_ch_G0000265;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000265;Name=RBMY1J
HG01258_chrY	CAT	transcript	23504890	23526351	100	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_G0000265;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01258_ch_T0000718;Name=RBMY1J
HG01258_chrY	CAT	exon	23504890	23506393	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23506383	23506393	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23506383	23506385	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01258_ch_T0000718;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23506394	23508986	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23508987	23509133	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23508987	23509133	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23509134	23512866	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23512867	23512955	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512867	23512955	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512956	23513041	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23513042	23513152	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23513042	23513152	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23513153	23514075	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514076	23514186	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514076	23514186	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514187	23514620	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514621	23514731	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514621	23514731	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514732	23515171	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23515172	23515282	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23515172	23515282	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23515283	23516237	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23516238	23516352	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23516238	23516352	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23516353	23518362	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23518363	23518515	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23518363	23518515	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23518516	23520430	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23520431	23520608	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23520431	23520608	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23520609	23523631	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23523632	23523735	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23523632	23523735	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23523736	23524203	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23524204	23524316	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23524204	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000718:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23524310	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01258_ch_T0000718;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23524317	23526177	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000718:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23526178	23526351	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1,hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000718;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000718;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000718:12;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23511879	23523723	100	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_G0000265;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01258_ch_T0000719;Name=RBMY1J
HG01258_chrY	CAT	exon	23511879	23512455	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512157	23512455	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23512157	23512159	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01258_ch_T0000719;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512456	23512866	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23512867	23512955	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512867	23512955	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512956	23513041	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23513042	23513152	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23513042	23513152	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23513153	23514075	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514076	23514186	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514076	23514186	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514187	23514620	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514621	23514731	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514621	23514731	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514732	23515171	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23515172	23515282	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23515172	23515282	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23515283	23516237	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23516238	23516352	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23516238	23516352	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23516353	23518362	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23518363	23518515	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23518363	23518486	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000719:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23518484	23518486	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01258_ch_T0000719;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23518516	23523631	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000719:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23523632	23523723	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2,hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000719;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000719;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000719:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23511879	23526351	100	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_G0000265;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01258_ch_T0000720;Name=RBMY1J
HG01258_chrY	CAT	exon	23511879	23512455	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512157	23512455	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23512157	23512159	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01258_ch_T0000720;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512456	23512866	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23512867	23512955	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512867	23512955	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512956	23513041	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23513042	23513152	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23513042	23513152	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23513153	23514075	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514076	23514186	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514076	23514186	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514187	23514620	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514621	23514731	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514621	23514731	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514732	23515171	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23515172	23515282	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23515172	23515282	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23515283	23516237	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23516238	23516352	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23516238	23516352	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23516353	23518362	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23518363	23518515	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23518363	23518515	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23518516	23520430	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23520431	23520608	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23520431	23520608	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23520609	23523631	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23523632	23523735	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23523632	23523735	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23523736	23524203	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23524204	23524316	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23524204	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000720:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23524310	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01258_ch_T0000720;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23524317	23526177	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000720:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23526178	23526351	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3,hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000720;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000720;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000720:11;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23511879	23526351	100	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_G0000265;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG01258_ch_T0000721;Name=RBMY1J
HG01258_chrY	CAT	exon	23511879	23512455	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512157	23512455	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23512157	23512159	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG01258_ch_T0000721;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512456	23512866	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:0;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23512867	23512955	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23512867	23512955	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23512956	23514075	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:1;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514076	23514186	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514076	23514186	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514187	23514620	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:2;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23514621	23514731	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23514621	23514731	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23514732	23515171	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:3;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23515172	23515282	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23515172	23515282	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23515283	23516237	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:4;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23516238	23516352	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23516238	23516352	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23516353	23518362	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:5;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23518363	23518515	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23518363	23518515	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23518516	23520430	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:6;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23520431	23520608	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23520431	23520608	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23520609	23523631	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:7;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23523632	23523735	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23523632	23523735	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23523736	23524203	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:8;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23524204	23524316	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23524204	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG01258_ch_T0000721:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23524310	23524312	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG01258_ch_T0000721;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23524317	23526177	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG01258_ch_T0000721:9;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23526178	23526351	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4,hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000721;gene_id=HG01258_ch_G0000265;Parent=HG01258_ch_T0000721;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG01258_ch_T0000721:10;Name=RBMY1J;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23609356	23613062	.	-	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;gene_id=HG01258_ch_G0000266;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG01258_ch_G0000266;Name=LOC100652931
HG01258_chrY	CAT	transcript	23609356	23613062	1000	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_G0000266;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG01258_ch_T0000722;Name=LOC100652931
HG01258_chrY	CAT	exon	23609356	23609377	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_T0000722;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01258_ch_T0000722:0;Name=LOC100652931;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23609378	23610842	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_T0000722;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG01258_ch_T0000722:0;Name=LOC100652931;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23610843	23610957	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_T0000722;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01258_ch_T0000722:1;Name=LOC100652931;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23610958	23612992	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_T0000722;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG01258_ch_T0000722:1;Name=LOC100652931;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23612993	23613062	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG01258_ch_T0000722;gene_id=HG01258_ch_G0000266;Parent=HG01258_ch_T0000722;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG01258_ch_T0000722:2;Name=LOC100652931;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23613535	23620883	.	-	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;gene_id=HG01258_ch_G0000267;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG01258_ch_G0000267;Name=RBMY2FP
HG01258_chrY	CAT	transcript	23613535	23620883	1000	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_G0000267;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG01258_ch_T0000723;Name=RBMY2FP
HG01258_chrY	CAT	exon	23613535	23615247	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01258_ch_T0000723:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23615248	23618241	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01258_ch_T0000723:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23618242	23618345	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01258_ch_T0000723:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23618346	23618767	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01258_ch_T0000723:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23618768	23618880	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01258_ch_T0000723:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23618881	23620771	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG01258_ch_T0000723:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23620772	23620883	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG01258_ch_T0000723;gene_id=HG01258_ch_G0000267;Parent=HG01258_ch_T0000723;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG01258_ch_T0000723:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23630872	23632950	.	+	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;gene_id=HG01258_ch_G0000268;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG01258_ch_G0000268;Name=TTTY5
HG01258_chrY	CAT	transcript	23630872	23632950	1000	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG01258_ch_T0000724;gene_id=HG01258_ch_G0000268;Parent=HG01258_ch_G0000268;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG01258_ch_T0000724;Name=TTTY5
HG01258_chrY	CAT	exon	23630872	23631442	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG01258_ch_T0000724;gene_id=HG01258_ch_G0000268;Parent=HG01258_ch_T0000724;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG01258_ch_T0000724:0;Name=TTTY5;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23631443	23631959	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG01258_ch_T0000724;gene_id=HG01258_ch_G0000268;Parent=HG01258_ch_T0000724;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG01258_ch_T0000724:0;Name=TTTY5;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23631960	23632950	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG01258_ch_T0000724;gene_id=HG01258_ch_G0000268;Parent=HG01258_ch_T0000724;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG01258_ch_T0000724:1;Name=TTTY5;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23746901	23766941	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;gene_id=HG01258_ch_G0000269;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000269;Name=RBMY1F
HG01258_chrY	CAT	transcript	23746901	23761284	100	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000725;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000725;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760010	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760011	23760121	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760011	23760121	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760122	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760291	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760291	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760292	23760707	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000725:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760708	23761284	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000725:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760708	23760780	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000725:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23760778	23760780	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1,hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000725;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000725;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000725;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23746901	23761284	100	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000726;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000726;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760296	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760296	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760297	23760707	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000726:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760708	23761284	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000726:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760708	23761006	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000726:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23761004	23761006	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2,hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000726;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000726;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000726;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23746901	23761284	100	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000727;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000727;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760010	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760011	23760121	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760011	23760121	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760122	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760296	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760296	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760297	23760707	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000727:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760708	23761284	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000727:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760708	23761006	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000727:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23761004	23761006	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3,hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000727;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000727;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000727;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23746901	23766941	100	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000728;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000728;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760010	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760011	23760121	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760011	23760121	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760122	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760296	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760296	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760297	23764029	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23764030	23764176	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23764030	23764176	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23764177	23766769	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000728:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23766770	23766941	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000728:12;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23766770	23766780	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000728:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23766778	23766780	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4,hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000728;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000728;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000728;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23746901	23766941	100	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000729;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000729;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760296	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760296	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760297	23764029	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23764030	23764176	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23764030	23764176	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23764177	23766769	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000729:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23766770	23766941	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000729:11;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23766770	23766780	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000729:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23766778	23766780	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5,hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000729;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000729;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000729;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	23746901	23766941	100	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_G0000269;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG01258_ch_T0000730;Name=RBMY1F
HG01258_chrY	CAT	exon	23746901	23746989	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23746990	23748850	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23748851	23748963	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23748855	23748963	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:0;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23748855	23748857	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG01258_ch_T0000730;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23748964	23749427	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23749428	23749531	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23749428	23749531	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:1;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23749532	23752554	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23752555	23752732	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23752555	23752732	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:2;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23752733	23754647	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23754648	23754800	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23754648	23754800	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:3;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23754801	23756810	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23756811	23756925	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23756811	23756925	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:4;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23756926	23757880	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23757881	23757991	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23757881	23757991	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:5;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23757992	23758431	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758432	23758542	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758432	23758542	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:6;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23758543	23758976	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23758977	23759087	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23758977	23759087	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:7;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23759088	23760207	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23760208	23760296	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23760208	23760296	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:8;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23760297	23766769	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG01258_ch_T0000730:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23766770	23766941	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG01258_ch_T0000730:10;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23766770	23766780	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG01258_ch_T0000730:9;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23766778	23766780	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6,hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000730;gene_id=HG01258_ch_G0000269;Parent=HG01258_ch_T0000730;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG01258_ch_T0000730;Name=RBMY1F;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23782344	23828122	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;gene_id=HG01258_ch_G0000270;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG01258_ch_G0000270;Name=LOC101929148
HG01258_chrY	CAT	transcript	23782344	23828122	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_G0000270;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG01258_ch_T0000731;Name=LOC101929148
HG01258_chrY	CAT	exon	23782344	23782544	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:0;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23782545	23782878	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:0;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23782879	23783188	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:1;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23783189	23789737	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:1;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23789738	23789878	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:2;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23789879	23799845	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:2;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23799846	23800068	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:3;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23800069	23800376	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:3;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23800377	23800462	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:4;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23800463	23807640	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:4;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23807641	23807759	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:5;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23807760	23808189	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:5;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23808190	23808543	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:6;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23808544	23822172	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:6;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23822173	23822262	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:7;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23822263	23823728	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:7;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23823729	23824064	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:8;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23824065	23825864	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:8;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23825865	23825950	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:9;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23825951	23826070	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:9;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23826071	23826267	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:10;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23826268	23826811	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:10;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23826812	23826929	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:11;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23826930	23827444	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG01258_ch_T0000731:11;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23827445	23828122	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=HG01258_ch_T0000731;gene_id=HG01258_ch_G0000270;Parent=HG01258_ch_T0000731;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG01258_ch_T0000731:12;Name=LOC101929148;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23782997	23784863	.	-	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;gene_id=HG01258_ch_G0000271;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG01258_ch_G0000271;Name=TTTY6
HG01258_chrY	CAT	transcript	23782997	23784863	1000	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_G0000271;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG01258_ch_T0000732;Name=TTTY6
HG01258_chrY	CAT	exon	23782997	23783235	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_T0000732;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01258_ch_T0000732:0;Name=TTTY6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23783236	23784392	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_T0000732;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG01258_ch_T0000732:0;Name=TTTY6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23784393	23784530	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_T0000732;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01258_ch_T0000732:1;Name=TTTY6;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23784531	23784748	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_T0000732;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG01258_ch_T0000732:1;Name=TTTY6;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23784749	23784863	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=HG01258_ch_T0000732;gene_id=HG01258_ch_G0000271;Parent=HG01258_ch_T0000732;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG01258_ch_T0000732:2;Name=TTTY6;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23833808	23858058	.	+	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;gene_id=HG01258_ch_G0000272;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000272;Name=PRY2
HG01258_chrY	CAT	transcript	23833808	23858058	100	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_G0000272;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG01258_ch_T0000733;Name=PRY2
HG01258_chrY	CAT	exon	23833808	23833895	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01258_ch_T0000733:0;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23833896	23833996	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01258_ch_T0000733:0;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23833997	23834083	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01258_ch_T0000733:1;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23834084	23844922	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01258_ch_T0000733:1;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23844923	23845043	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01258_ch_T0000733:2;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23844975	23845043	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01258_ch_T0000733:0;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	23844975	23844977	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG01258_ch_T0000733;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23845044	23847618	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01258_ch_T0000733:2;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23847619	23847734	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01258_ch_T0000733:3;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23847619	23847734	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01258_ch_T0000733:1;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23847735	23857232	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG01258_ch_T0000733:3;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23857233	23858058	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG01258_ch_T0000733:4;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	23857233	23857491	.	+	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG01258_ch_T0000733:2;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	23857489	23857491	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000733;gene_id=HG01258_ch_G0000272;Parent=HG01258_ch_T0000733;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG01258_ch_T0000733;Name=PRY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	23899467	23901464	.	-	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;gene_id=HG01258_ch_G0000273;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG01258_ch_G0000273;Name=LOC107987357
HG01258_chrY	CAT	transcript	23899467	23901464	1000	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_G0000273;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG01258_ch_T0000734;Name=LOC107987357
HG01258_chrY	CAT	exon	23899467	23899668	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_T0000734;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01258_ch_T0000734:0;Name=LOC107987357;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23899669	23901203	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_T0000734;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG01258_ch_T0000734:0;Name=LOC107987357;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23901204	23901264	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_T0000734;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01258_ch_T0000734:1;Name=LOC107987357;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	23901265	23901381	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_T0000734;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG01258_ch_T0000734:1;Name=LOC107987357;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	23901382	23901464	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG01258_ch_T0000734;gene_id=HG01258_ch_G0000273;Parent=HG01258_ch_T0000734;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG01258_ch_T0000734:2;Name=LOC107987357;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24129650	24140888	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG01258_ch_G0000274;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG01258_ch_G0000274;Name=LOC107987348
HG01258_chrY	CAT	transcript	24129650	24140888	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_G0000274;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG01258_ch_T0000735;Name=LOC107987348
HG01258_chrY	CAT	exon	24129650	24130105	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000735;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000735:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24130106	24136075	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000735;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01258_ch_T0000735:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24136076	24138240	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000735;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000735:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24138241	24138881	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000735;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01258_ch_T0000735:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24138882	24140888	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG01258_ch_T0000735;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000735;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000735:2;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24129650	24140888	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_G0000274;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG01258_ch_T0000736;Name=LOC107987348
HG01258_chrY	CAT	exon	24129650	24130105	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000736;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000736:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24130106	24135607	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000736;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01258_ch_T0000736:0;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24135608	24138240	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000736;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000736:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24138241	24138881	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000736;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG01258_ch_T0000736:1;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24138882	24140888	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG01258_ch_T0000736;gene_id=HG01258_ch_G0000274;Parent=HG01258_ch_T0000736;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG01258_ch_T0000736:2;Name=LOC107987348;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24195029	24196160	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;gene_id=HG01258_ch_G0000275;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG01258_ch_G0000275;Name=TTTY17A
HG01258_chrY	CAT	transcript	24195029	24196160	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG01258_ch_T0000737;gene_id=HG01258_ch_G0000275;Parent=HG01258_ch_G0000275;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG01258_ch_T0000737;Name=TTTY17A
HG01258_chrY	CAT	exon	24195029	24195088	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG01258_ch_T0000737;gene_id=HG01258_ch_G0000275;Parent=HG01258_ch_T0000737;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG01258_ch_T0000737:0;Name=TTTY17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24195089	24196054	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG01258_ch_T0000737;gene_id=HG01258_ch_G0000275;Parent=HG01258_ch_T0000737;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG01258_ch_T0000737:0;Name=TTTY17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24196055	24196160	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG01258_ch_T0000737;gene_id=HG01258_ch_G0000275;Parent=HG01258_ch_T0000737;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG01258_ch_T0000737:1;Name=TTTY17A;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24279906	24316723	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;gene_id=HG01258_ch_G0000276;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG01258_ch_G0000276;Name=TTTY4C
HG01258_chrY	CAT	transcript	24279906	24316723	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_G0000276;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG01258_ch_T0000738;Name=TTTY4C
HG01258_chrY	CAT	exon	24279906	24280066	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01258_ch_T0000738:0;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24280067	24307084	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01258_ch_T0000738:0;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24307085	24307160	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01258_ch_T0000738:1;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24307161	24308964	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01258_ch_T0000738:1;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24308965	24309072	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01258_ch_T0000738:2;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24309073	24315722	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG01258_ch_T0000738:2;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24315723	24316723	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG01258_ch_T0000738;gene_id=HG01258_ch_G0000276;Parent=HG01258_ch_T0000738;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG01258_ch_T0000738:3;Name=TTTY4C;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24327702	24348905	.	+	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;gene_id=HG01258_ch_G0000277;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000277;Name=BPY2C
HG01258_chrY	CAT	transcript	24327702	24348905	100	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_G0000277;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG01258_ch_T0000739;Name=BPY2C
HG01258_chrY	CAT	exon	24327702	24327732	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:0;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24327733	24328007	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:0;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24328008	24328130	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:1;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24328131	24331195	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:1;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24331196	24331332	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:2;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24331333	24335741	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:2;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24335742	24335860	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:3;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24335783	24335860	.	+	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01258_ch_T0000739:0;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24335783	24335785	.	+	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG01258_ch_T0000739;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24335861	24337919	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:3;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24337920	24338037	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:4;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24337920	24338037	.	+	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01258_ch_T0000739:1;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24338038	24340891	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:4;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24340892	24340997	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:5;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24340892	24340997	.	+	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01258_ch_T0000739:2;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24340998	24341689	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:5;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24341690	24341814	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:6;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24341690	24341708	.	+	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG01258_ch_T0000739:3;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24341706	24341708	.	+	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG01258_ch_T0000739;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24341815	24348364	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:6;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24348365	24348489	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:7;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24348490	24348583	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG01258_ch_T0000739:7;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24348584	24348905	.	+	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1,hg002_chrY_paternal_520.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000739;gene_id=HG01258_ch_G0000277;Parent=HG01258_ch_T0000739;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG01258_ch_T0000739:8;Name=BPY2C;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24449833	24453174	.	-	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;gene_id=HG01258_ch_G0000278;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG01258_ch_G0000278;Name=LOC105377241
HG01258_chrY	CAT	transcript	24449833	24453174	1000	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_G0000278;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG01258_ch_T0000740;Name=LOC105377241
HG01258_chrY	CAT	exon	24449833	24449933	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000740;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000740:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24449934	24452264	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000740;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01258_ch_T0000740:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24452265	24452329	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000740;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000740:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24452330	24452991	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000740;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01258_ch_T0000740:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24452992	24453174	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.1,hg002_chrY_paternal_525.1;transcript_id=HG01258_ch_T0000740;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000740;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000740:2;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24449833	24453174	1000	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_G0000278;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG01258_ch_T0000741;Name=LOC105377241
HG01258_chrY	CAT	exon	24449833	24449933	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000741;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000741:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24449934	24452291	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000741;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01258_ch_T0000741:0;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24452292	24452329	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000741;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000741:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24452330	24452991	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000741;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG01258_ch_T0000741:1;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24452992	24453174	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;alternative_source_transcripts=hg002_chrY_paternal_525.2,hg002_chrY_paternal_525.2;transcript_id=HG01258_ch_T0000741;gene_id=HG01258_ch_G0000278;Parent=HG01258_ch_T0000741;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG01258_ch_T0000741:2;Name=LOC105377241;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24472798	24532687	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=HG01258_ch_G0000279;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG01258_ch_G0000279;Name=DAZ3
HG01258_chrY	CAT	transcript	24472798	24532687	9920	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_G0000279;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG01258_ch_T0000742;Name=DAZ3
HG01258_chrY	CAT	exon	24472798	24474654	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:0;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24474655	24478617	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:0;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24478618	24478716	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:1;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24478653	24478716	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:0;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24478653	24478655	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG01258_ch_T0000742;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24478717	24483289	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:1;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24483290	24483324	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:2;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24483290	24483324	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:1;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24483325	24484068	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:2;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24484069	24484140	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:3;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24484069	24484140	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:2;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24484141	24508163	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:3;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24508164	24508235	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:4;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24508164	24508235	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:3;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24508236	24510540	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:4;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24510541	24510612	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:5;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24510541	24510612	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:4;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24510613	24512936	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:5;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24512937	24513008	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:6;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24512937	24513008	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:5;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24513009	24515319	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:6;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24515320	24515391	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:7;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24515320	24515391	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:6;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24515392	24517715	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:7;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24517716	24517787	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:8;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24517716	24517787	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:7;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24517788	24520106	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:8;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24520107	24520178	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:9;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24520107	24520178	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:8;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24520179	24522550	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:9;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24522551	24522622	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:10;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24522551	24522622	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:9;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24522623	24532476	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG01258_ch_T0000742:10;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24532477	24532687	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG01258_ch_T0000742:11;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24532477	24532479	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG01258_ch_T0000742:10;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24532477	24532479	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=212.22111111111113;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000742;gene_id=HG01258_ch_G0000279;Parent=HG01258_ch_T0000742;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG01258_ch_T0000742;Name=DAZ3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24553113	24622870	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG01258_ch_G0000280;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=augTM,transMap,transMap_pairwise;ID=HG01258_ch_G0000280;Name=DAZ4
HG01258_chrY	CAT	transcript	24553113	24622870	9930	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_G0000280;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG01258_ch_T0000743;Name=DAZ4
HG01258_chrY	CAT	exon	24553113	24553422	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG01258_ch_T0000743;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24553423	24560022	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24560023	24560169	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24560023	24560169	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24560170	24560443	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24560444	24560535	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24560444	24560535	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24560536	24561095	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561096	24561147	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561096	24561147	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561148	24561583	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561584	24561647	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561584	24561647	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561648	24561736	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561737	24561876	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561737	24561876	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561877	24611527	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24611528	24611599	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24611528	24611599	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24611600	24612343	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24612344	24612378	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24612344	24612378	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24612379	24616951	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24616952	24617050	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24616952	24617015	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000743:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24617013	24617015	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG01258_ch_T0000743;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24617051	24621013	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000743:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24621014	24622870	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=229.30071428571426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000743;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000743;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000743:9;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24553113	24622870	9920	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_G0000280;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG01258_ch_T0000744;Name=DAZ4
HG01258_chrY	CAT	exon	24553113	24553422	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000744:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000744:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG01258_ch_T0000744;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24553423	24611527	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000744:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24611528	24611599	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000744:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24611528	24611599	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000744:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24611600	24612343	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000744:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24612344	24612378	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000744:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24612344	24612378	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000744:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24612379	24616951	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000744:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24616952	24617050	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000744:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24616952	24617015	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000744:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24617013	24617015	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG01258_ch_T0000744;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24617051	24621013	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000744:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24621014	24622870	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=187.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000744;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000744;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000744:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24553212	24622870	9920	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_G0000280;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG01258_ch_T0000745;Name=DAZ4
HG01258_chrY	CAT	exon	24553212	24553422	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24553420	24553422	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG01258_ch_T0000745;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24553423	24560022	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:0;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24560023	24560169	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24560023	24560169	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24560170	24560443	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:1;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24560444	24560535	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24560444	24560535	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24560536	24561095	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:2;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561096	24561147	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561096	24561147	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561148	24561583	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:3;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561584	24561647	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561584	24561647	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561648	24561736	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:4;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24561737	24561876	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24561737	24561876	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24561877	24611527	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:5;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24611528	24611599	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24611528	24611599	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24611600	24612343	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:6;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24612344	24612378	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24612344	24612378	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24612379	24616951	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:7;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24616952	24617050	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24616952	24617015	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG01258_ch_T0000745:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24617013	24617015	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG01258_ch_T0000745;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24617051	24621013	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG01258_ch_T0000745:8;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24621014	24622870	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=190.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000745;gene_id=HG01258_ch_G0000280;Parent=HG01258_ch_T0000745;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG01258_ch_T0000745:9;Name=DAZ4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24642491	24645828	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;gene_id=HG01258_ch_G0000281;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG01258_ch_G0000281;Name=LOC105377239
HG01258_chrY	CAT	transcript	24642491	24645828	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_G0000281;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG01258_ch_T0000746;Name=LOC105377239
HG01258_chrY	CAT	exon	24642491	24642669	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000746;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000746:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24642670	24643331	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000746;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01258_ch_T0000746:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24643332	24643396	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000746;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000746:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24643397	24645727	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000746;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01258_ch_T0000746:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24645728	24645828	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1,hg002_chrY_paternal_528.1;transcript_id=HG01258_ch_T0000746;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000746;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000746:2;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24642491	24645828	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_G0000281;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG01258_ch_T0000747;Name=LOC105377239
HG01258_chrY	CAT	exon	24642491	24642669	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000747;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000747:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24642670	24643331	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000747;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01258_ch_T0000747:0;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24643332	24643369	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000747;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000747:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24643370	24645727	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000747;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG01258_ch_T0000747:1;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24645728	24645828	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2,hg002_chrY_paternal_528.2;transcript_id=HG01258_ch_T0000747;gene_id=HG01258_ch_G0000281;Parent=HG01258_ch_T0000747;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG01258_ch_T0000747:2;Name=LOC105377239;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24746714	24767917	.	-	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;gene_id=HG01258_ch_G0000282;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG01258_ch_G0000282;Name=BPY2
HG01258_chrY	CAT	transcript	24746714	24767917	100	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_G0000282;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG01258_ch_T0000748;Name=BPY2
HG01258_chrY	CAT	exon	24746714	24747035	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:0;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24747036	24747129	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:0;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24747130	24747254	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:1;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24747255	24753804	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:1;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24753805	24753929	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:2;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24753911	24753929	.	-	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01258_ch_T0000748:0;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	24753911	24753913	.	-	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG01258_ch_T0000748;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24753930	24754621	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:2;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24754622	24754727	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:3;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24754622	24754727	.	-	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01258_ch_T0000748:1;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24754728	24757581	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:3;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24757582	24757699	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:4;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24757582	24757699	.	-	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01258_ch_T0000748:2;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24757700	24759758	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:4;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24759759	24759877	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:5;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	24759759	24759836	.	-	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG01258_ch_T0000748:3;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	24759834	24759836	.	-	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG01258_ch_T0000748;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24759878	24764286	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:5;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24764287	24764423	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:6;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24764424	24767488	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:6;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24767489	24767611	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:7;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24767612	24767886	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG01258_ch_T0000748:7;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24767887	24767917	.	-	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1,hg002_chrY_paternal_533.1;transcript_id=HG01258_ch_T0000748;gene_id=HG01258_ch_G0000282;Parent=HG01258_ch_T0000748;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG01258_ch_T0000748:8;Name=BPY2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24778896	24815697	.	-	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;gene_id=HG01258_ch_G0000283;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG01258_ch_G0000283;Name=TTTY4B
HG01258_chrY	CAT	transcript	24778896	24815697	1000	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_G0000283;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG01258_ch_T0000749;Name=TTTY4B
HG01258_chrY	CAT	exon	24778896	24779896	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01258_ch_T0000749:0;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24779897	24786546	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01258_ch_T0000749:0;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24786547	24786654	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01258_ch_T0000749:1;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24786655	24788458	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01258_ch_T0000749:1;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24788459	24788534	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01258_ch_T0000749:2;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24788535	24815536	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG01258_ch_T0000749:2;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24815537	24815697	.	-	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1,hg002_chrY_paternal_534.1;transcript_id=HG01258_ch_T0000749;gene_id=HG01258_ch_G0000283;Parent=HG01258_ch_T0000749;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG01258_ch_T0000749:3;Name=TTTY4B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24899450	24900581	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_537.1,hg002_chrY_paternal_537.1;gene_id=HG01258_ch_G0000284;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG01258_ch_G0000284;Name=TTTY17B
HG01258_chrY	CAT	transcript	24899450	24900581	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1,hg002_chrY_paternal_537.1;transcript_id=HG01258_ch_T0000750;gene_id=HG01258_ch_G0000284;Parent=HG01258_ch_G0000284;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG01258_ch_T0000750;Name=TTTY17B
HG01258_chrY	CAT	exon	24899450	24899555	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1,hg002_chrY_paternal_537.1;transcript_id=HG01258_ch_T0000750;gene_id=HG01258_ch_G0000284;Parent=HG01258_ch_T0000750;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG01258_ch_T0000750:0;Name=TTTY17B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24899556	24900521	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1,hg002_chrY_paternal_537.1;transcript_id=HG01258_ch_T0000750;gene_id=HG01258_ch_G0000284;Parent=HG01258_ch_T0000750;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG01258_ch_T0000750:0;Name=TTTY17B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24900522	24900581	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1,hg002_chrY_paternal_537.1;transcript_id=HG01258_ch_T0000750;gene_id=HG01258_ch_G0000284;Parent=HG01258_ch_T0000750;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG01258_ch_T0000750:1;Name=TTTY17B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	24952852	24965957	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;gene_id=HG01258_ch_G0000285;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG01258_ch_G0000285;Name=LOC107987350
HG01258_chrY	CAT	transcript	24952852	24965957	1000	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_G0000285;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG01258_ch_T0000751;Name=LOC107987350
HG01258_chrY	CAT	exon	24952852	24956725	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000751;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000751:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24956726	24957366	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000751;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000751:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24957367	24959531	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000751;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000751:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24959532	24965501	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000751;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000751:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24965502	24965957	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1,hg002_chrY_paternal_538.1;transcript_id=HG01258_ch_T0000751;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000751;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000751:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	24952852	24965957	1000	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_G0000285;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG01258_ch_T0000752;Name=LOC107987350
HG01258_chrY	CAT	exon	24952852	24956725	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000752;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000752:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24956726	24957366	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000752;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000752:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24957367	24959999	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000752;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000752:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	24960000	24965501	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000752;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000752:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	24965502	24965957	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2,hg002_chrY_paternal_538.2;transcript_id=HG01258_ch_T0000752;gene_id=HG01258_ch_G0000285;Parent=HG01258_ch_T0000752;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000752:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25054722	25056355	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;gene_id=HG01258_ch_G0000286;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG01258_ch_G0000286;Name=LOC101928626
HG01258_chrY	CAT	transcript	25054722	25056355	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_G0000286;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG01258_ch_T0000753;Name=LOC101928626
HG01258_chrY	CAT	exon	25054722	25055165	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_T0000753;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000753:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25055166	25055302	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_T0000753;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG01258_ch_T0000753:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25055303	25055569	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_T0000753;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000753:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25055570	25056264	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_T0000753;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG01258_ch_T0000753:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25056265	25056355	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1,hg002_chrY_paternal_541.1;transcript_id=HG01258_ch_T0000753;gene_id=HG01258_ch_G0000286;Parent=HG01258_ch_T0000753;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000753:2;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25064236	25075225	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;gene_id=HG01258_ch_G0000287;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG01258_ch_G0000287;Name=LOC107987240
HG01258_chrY	CAT	transcript	25064236	25075225	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_G0000287;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG01258_ch_T0000754;Name=LOC107987240
HG01258_chrY	CAT	exon	25064236	25064467	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_T0000754;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000754:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25064468	25074251	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_T0000754;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG01258_ch_T0000754:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25074252	25074358	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_T0000754;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000754:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25074359	25074567	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_T0000754;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG01258_ch_T0000754:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25074568	25075225	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1,hg002_chrY_paternal_542.1;transcript_id=HG01258_ch_T0000754;gene_id=HG01258_ch_G0000287;Parent=HG01258_ch_T0000754;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000754:2;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25094087	25110505	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=HG01258_ch_G0000288;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG01258_ch_G0000288;Name=SEPTIN14P23
HG01258_chrY	CAT	transcript	25094087	25110505	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_G0000288;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG01258_ch_T0000755;Name=SEPTIN14P23
HG01258_chrY	CAT	exon	25094087	25094665	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_T0000755;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000755:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25094666	25102701	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_T0000755;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01258_ch_T0000755:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25102702	25102870	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_T0000755;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000755:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25102871	25110411	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_T0000755;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01258_ch_T0000755:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25110412	25110505	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG01258_ch_T0000755;gene_id=HG01258_ch_G0000288;Parent=HG01258_ch_T0000755;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000755:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25171095	25175959	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;gene_id=HG01258_ch_G0000289;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG01258_ch_G0000289;Name=GOLGA2P3Y
HG01258_chrY	CAT	transcript	25171095	25175959	1000	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_G0000289;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG01258_ch_T0000756;Name=GOLGA2P3Y
HG01258_chrY	CAT	exon	25171095	25171137	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25171138	25171323	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25171324	25171402	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25171403	25172521	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25172522	25172873	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25172874	25173169	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25173170	25173227	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25173228	25174583	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25174584	25174658	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25174659	25175078	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25175079	25175167	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25175168	25175422	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25175423	25175611	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25175612	25175700	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25175701	25175793	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25175794	25175875	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG01258_ch_T0000756:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25175876	25175959	.	+	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1,hg002_chrY_paternal_550.1;transcript_id=HG01258_ch_T0000756;gene_id=HG01258_ch_G0000289;Parent=HG01258_ch_T0000756;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG01258_ch_T0000756:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25177958	25179488	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;gene_id=HG01258_ch_G0000290;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG01258_ch_G0000290;Name=LOC102724034
HG01258_chrY	CAT	transcript	25177958	25179488	1000	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_G0000290;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG01258_ch_T0000757;Name=LOC102724034
HG01258_chrY	CAT	exon	25177958	25178381	.	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_T0000757;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000757:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25178382	25178649	.	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_T0000757;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG01258_ch_T0000757:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25178650	25178774	.	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_T0000757;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000757:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25178775	25179462	.	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_T0000757;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG01258_ch_T0000757:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25179463	25179488	.	-	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1,hg002_chrY_paternal_552.1;transcript_id=HG01258_ch_T0000757;gene_id=HG01258_ch_G0000290;Parent=HG01258_ch_T0000757;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000757:2;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25198695	25202492	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;alternative_source_transcripts=hg002_chrY_paternal_556.1;gene_id=HG01258_ch_G0000291;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap;ID=HG01258_ch_G0000291;Name=CSPG4P1Y
HG01258_chrY	CAT	transcript	25198695	25202492	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG01258_ch_T0000758;gene_id=HG01258_ch_G0000291;Parent=HG01258_ch_G0000291;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG01258_ch_T0000758;Name=CSPG4P1Y
HG01258_chrY	CAT	exon	25198695	25199417	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG01258_ch_T0000758;gene_id=HG01258_ch_G0000291;Parent=HG01258_ch_T0000758;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01258_ch_T0000758:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25199418	25202420	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG01258_ch_T0000758;gene_id=HG01258_ch_G0000291;Parent=HG01258_ch_T0000758;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG01258_ch_T0000758:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25202421	25202492	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG01258_ch_T0000758;gene_id=HG01258_ch_G0000291;Parent=HG01258_ch_T0000758;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01258_ch_T0000758:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25337904	25340694	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;alternative_source_transcripts=hg002_chrY_paternal_565.1;gene_id=HG01258_ch_G0000292;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=augTM,transMap;ID=HG01258_ch_G0000292;Name=CDY1B
HG01258_chrY	CAT	transcript	25337904	25340130	9990	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=299.938;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000759;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_G0000292;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG01258_ch_T0000759;Name=CDY1B
HG01258_chrY	CAT	exon	25337904	25340130	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000759;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000759;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01258_ch_T0000759:0;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	25338235	25339857	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000759;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000759;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01258_ch_T0000759:0;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	25338235	25338237	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000759;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000759;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG01258_ch_T0000759;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	25339855	25339857	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000759;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000759;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG01258_ch_T0000759;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	25337917	25340694	9990	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_G0000292;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG01258_ch_T0000760;Name=CDY1B
HG01258_chrY	CAT	exon	25337917	25339626	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01258_ch_T0000760:0;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	25338235	25339626	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01258_ch_T0000760:0;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	25338235	25338237	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG01258_ch_T0000760;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25339627	25340246	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG01258_ch_T0000760:0;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25340247	25340694	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG01258_ch_T0000760:1;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	25340247	25340267	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG01258_ch_T0000760:1;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	25340265	25340267	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_565.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000760;gene_id=HG01258_ch_G0000292;Parent=HG01258_ch_T0000760;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG01258_ch_T0000760;Name=CDY1B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25444270	25449165	.	+	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;gene_id=HG01258_ch_G0000293;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG01258_ch_G0000293;Name=TTTY3B
HG01258_chrY	CAT	transcript	25444270	25449165	1000	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_G0000293;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG01258_ch_T0000761;Name=TTTY3B
HG01258_chrY	CAT	exon	25444270	25444373	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_T0000761;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01258_ch_T0000761:0;Name=TTTY3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25444374	25446571	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_T0000761;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG01258_ch_T0000761:0;Name=TTTY3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25446572	25446706	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_T0000761;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01258_ch_T0000761:1;Name=TTTY3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25446707	25449060	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_T0000761;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG01258_ch_T0000761:1;Name=TTTY3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25449061	25449165	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1,hg002_chrY_paternal_572.1;transcript_id=HG01258_ch_T0000761;gene_id=HG01258_ch_G0000293;Parent=HG01258_ch_T0000761;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG01258_ch_T0000761:2;Name=TTTY3B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25745106	25748230	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;gene_id=HG01258_ch_G0000294;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG01258_ch_G0000294;Name=LOC107987352
HG01258_chrY	CAT	transcript	25745106	25748230	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_G0000294;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG01258_ch_T0000762;Name=LOC107987352
HG01258_chrY	CAT	exon	25745106	25746434	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_T0000762;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01258_ch_T0000762:0;Name=LOC107987352;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25746435	25747969	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_T0000762;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG01258_ch_T0000762:0;Name=LOC107987352;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25747970	25748030	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_T0000762;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01258_ch_T0000762:1;Name=LOC107987352;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25748031	25748147	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_T0000762;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG01258_ch_T0000762:1;Name=LOC107987352;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25748148	25748230	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_593.1,hg002_chrY_paternal_593.1;transcript_id=HG01258_ch_T0000762;gene_id=HG01258_ch_G0000294;Parent=HG01258_ch_T0000762;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG01258_ch_T0000762:2;Name=LOC107987352;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25909139	25950642	.	-	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;gene_id=HG01258_ch_G0000295;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG01258_ch_G0000295;Name=REREP1Y
HG01258_chrY	CAT	transcript	25909139	25950642	1000	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_G0000295;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG01258_ch_T0000763;Name=REREP1Y
HG01258_chrY	CAT	exon	25909139	25913728	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_T0000763;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01258_ch_T0000763:0;Name=REREP1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25913729	25923346	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_T0000763;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG01258_ch_T0000763:0;Name=REREP1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25923347	25923419	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_T0000763;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01258_ch_T0000763:1;Name=REREP1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	25923420	25950239	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_T0000763;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG01258_ch_T0000763:1;Name=REREP1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	25950240	25950642	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1,hg002_chrY_paternal_596.1;transcript_id=HG01258_ch_T0000763;gene_id=HG01258_ch_G0000295;Parent=HG01258_ch_T0000763;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG01258_ch_T0000763:2;Name=REREP1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	25962646	25962783	.	+	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1,hg002_chrY_paternal_597.1;gene_id=HG01258_ch_G0000296;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG01258_ch_G0000296;Name=LOC124900506
HG01258_chrY	CAT	transcript	25962646	25962783	1000	+	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1,hg002_chrY_paternal_597.1;transcript_id=HG01258_ch_T0000764;gene_id=HG01258_ch_G0000296;Parent=HG01258_ch_G0000296;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG01258_ch_T0000764;Name=LOC124900506
HG01258_chrY	CAT	exon	25962646	25962783	.	+	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1,hg002_chrY_paternal_597.1;transcript_id=HG01258_ch_T0000764;gene_id=HG01258_ch_G0000296;Parent=HG01258_ch_T0000764;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG01258_ch_T0000764:0;Name=LOC124900506;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26071539	26074880	.	-	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;gene_id=HG01258_ch_G0000297;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG01258_ch_G0000297;Name=LOC105377238
HG01258_chrY	CAT	transcript	26071539	26074880	1000	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_G0000297;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG01258_ch_T0000765;Name=LOC105377238
HG01258_chrY	CAT	exon	26071539	26071639	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000765;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000765:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26071640	26073970	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000765;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01258_ch_T0000765:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26073971	26074035	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000765;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000765:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26074036	26074697	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000765;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01258_ch_T0000765:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26074698	26074880	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.1,hg002_chrY_paternal_599.1;transcript_id=HG01258_ch_T0000765;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000765;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000765:2;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26071539	26074880	1000	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_G0000297;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG01258_ch_T0000766;Name=LOC105377238
HG01258_chrY	CAT	exon	26071539	26071639	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000766;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000766:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26071640	26073997	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000766;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01258_ch_T0000766:0;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26073998	26074035	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000766;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000766:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26074036	26074697	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000766;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG01258_ch_T0000766:1;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26074698	26074880	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;alternative_source_transcripts=hg002_chrY_paternal_599.2,hg002_chrY_paternal_599.2;transcript_id=HG01258_ch_T0000766;gene_id=HG01258_ch_G0000297;Parent=HG01258_ch_T0000766;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG01258_ch_T0000766:2;Name=LOC105377238;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26094493	26155777	.	-	.	source_gene_common_name=DAZ1;source_gene=hg002_chrY_paternal_600;alternative_source_transcripts=hg002_chrY_paternal_600.1;gene_id=HG01258_ch_G0000298;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=augTM,transMap,transMap_pairwise;ID=HG01258_ch_G0000298;Name=DAZ1
HG01258_chrY	CAT	transcript	26094493	26155691	9940	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_G0000298;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=HG01258_ch_T0000767;Name=DAZ1
HG01258_chrY	CAT	exon	26094493	26096349	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26096350	26100322	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26100323	26100421	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26100358	26100421	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26100358	26100360	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=stop_codon:HG01258_ch_T0000767;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26100422	26104993	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26104994	26105028	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26104994	26105028	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26105029	26105773	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26105774	26105845	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26105774	26105845	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26105846	26115561	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26115562	26115633	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26115562	26115633	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26115634	26117938	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26117939	26118010	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26117939	26118010	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26118011	26125091	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26125092	26125163	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26125092	26125163	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26125164	26127475	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26127476	26127547	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26127476	26127547	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26127548	26129871	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26129872	26129943	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26129872	26129943	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26129944	26132261	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26132262	26132333	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26132262	26132333	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26132334	26134704	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26134705	26134776	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26134705	26134776	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26134777	26136176	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26136177	26136316	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26136177	26136316	.	-	2	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26136317	26136405	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26136406	26136469	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26136406	26136469	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26136470	26136905	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26136906	26136957	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26136906	26136957	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26136958	26137517	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26137518	26137609	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26137518	26137609	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26137610	26137883	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26137884	26138030	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26137884	26138030	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26138031	26147025	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147026	26147165	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:16;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147026	26147165	.	-	2	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147166	26147254	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:16;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147255	26147318	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:17;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147255	26147318	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:16;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147319	26147754	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:17;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147755	26147806	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:18;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147755	26147806	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:17;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147807	26148366	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:18;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26148367	26148458	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:19;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26148367	26148458	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:18;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26148459	26148732	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:19;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26148733	26148879	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:20;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26148733	26148879	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:19;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26148880	26155480	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000767:20;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26155481	26155691	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000767:21;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26155481	26155483	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000767:20;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26155481	26155483	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=252.30377777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=hg002_chrY_paternal_600.1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000767;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000767;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=start_codon:HG01258_ch_T0000767;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26094493	26155777	10000	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_G0000298;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=HG01258_ch_T0000768;Name=DAZ1
HG01258_chrY	CAT	exon	26094493	26096349	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26096350	26100322	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26100323	26100421	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26100358	26100421	.	-	1	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:0;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26100358	26100360	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=stop_codon:HG01258_ch_T0000768;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26100422	26104993	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26104994	26105028	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26104994	26105028	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:1;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26105029	26105773	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26105774	26105845	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26105774	26105845	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:2;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26105846	26115561	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26115562	26115633	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26115562	26115633	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:3;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26115634	26117938	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26117939	26118010	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26117939	26118010	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:4;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26118011	26125091	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26125092	26125163	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26125092	26125163	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:5;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26125164	26127475	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26127476	26127547	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26127476	26127547	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:6;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26127548	26129871	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26129872	26129943	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26129872	26129943	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:7;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26129944	26132261	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26132262	26132333	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26132262	26132333	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:8;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26132334	26134704	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26134705	26134776	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26134705	26134776	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:9;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26134777	26147025	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147026	26147165	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147026	26147165	.	-	2	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:10;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147166	26147254	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147255	26147318	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147255	26147318	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:11;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147319	26147754	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26147755	26147806	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26147755	26147806	.	-	1	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:12;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26147807	26148366	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26148367	26148458	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26148367	26148458	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:13;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26148459	26148732	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26148733	26148879	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26148733	26148879	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:14;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26148880	26155480	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG01258_ch_T0000768:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26155481	26155777	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG01258_ch_T0000768:16;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26155481	26155483	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG01258_ch_T0000768:15;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26155481	26155483	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG01258_ch_T0000768;gene_id=HG01258_ch_G0000298;Parent=HG01258_ch_T0000768;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=start_codon:HG01258_ch_T0000768;Name=DAZ1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26176141	26231343	.	+	.	source_gene_common_name=DAZ2;source_gene=hg002_chrY_paternal_601;alternative_source_transcripts=hg002_chrY_paternal_601.3;gene_id=HG01258_ch_G0000299;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=augTM,transMap,transMap_pairwise;ID=HG01258_ch_G0000299;Name=DAZ2
HG01258_chrY	CAT	transcript	26176141	26231343	9960	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000769;Name=DAZ2
HG01258_chrY	CAT	exon	26176141	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000769;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183028	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183029	26183175	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183029	26183175	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183176	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26191115	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26191116	26191187	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26191116	26191187	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26191188	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26215222	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26215223	26215294	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26215223	26215294	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26215295	26217606	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26217607	26217678	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26217607	26217678	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26217679	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000769:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000769;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000769:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=289.4768421052632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000769;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000769;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000769:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26176141	26231343	9950	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000770;Name=DAZ2
HG01258_chrY	CAT	exon	26176141	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000770;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183028	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183029	26183175	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183029	26183175	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183176	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000770:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000770;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000770:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=286.6963333333333;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000770;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000770;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000770:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26176217	26231343	9940	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000771;Name=DAZ2
HG01258_chrY	CAT	exon	26176217	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000771;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183028	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183029	26183175	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183029	26183175	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183176	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26191115	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26191116	26191187	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26191116	26191187	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26191188	26193511	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26193512	26193583	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26193512	26193583	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26193584	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26215222	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26215223	26215294	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26215223	26215294	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26215295	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000771:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000771;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000771:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=270.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000771;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000771;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000771:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26176217	26231343	9940	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000772;Name=DAZ2
HG01258_chrY	CAT	exon	26176217	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000772;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26191115	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26191116	26191187	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26191116	26191187	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26191188	26193511	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26193512	26193583	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26193512	26193583	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26193584	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26215222	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26215223	26215294	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26215223	26215294	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26215295	26217606	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26217607	26217678	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26217607	26217678	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26217679	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000772:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000772;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000772:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=269.331;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000772;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000772;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000772:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26176217	26231343	9940	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000773;Name=DAZ2
HG01258_chrY	CAT	exon	26176217	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000773;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183028	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183029	26183175	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183029	26183175	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183176	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26191115	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26191116	26191187	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26191116	26191187	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26191188	26193511	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26193512	26193583	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26193512	26193583	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26193584	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26215222	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26215223	26215294	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26215223	26215294	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26215295	26217606	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26217607	26217678	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26217607	26217678	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26217679	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000773:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000773;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000773:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.7;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.7;transcript_score=271.5482857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000773;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000773;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000773:18;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26176217	26231343	9950	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_G0000299;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG01258_ch_T0000774;Name=DAZ2
HG01258_chrY	CAT	exon	26176217	26176427	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26176425	26176427	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG01258_ch_T0000774;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26176428	26183028	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:0;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183029	26183175	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183029	26183175	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183176	26183449	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:1;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26183450	26183541	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26183450	26183541	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26183542	26184101	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:2;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184102	26184153	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184102	26184153	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184154	26184589	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:3;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184590	26184653	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184590	26184653	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184654	26184742	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:4;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26184743	26184882	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26184743	26184882	.	+	2	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26184883	26186282	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:5;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26186283	26186354	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26186283	26186354	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26186355	26188725	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:6;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26188726	26188797	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26188726	26188797	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26188798	26191115	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:7;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26191116	26191187	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26191116	26191187	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26191188	26203300	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:8;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26203301	26203372	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26203301	26203372	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26203373	26210454	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:9;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26210455	26210526	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26210455	26210526	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26210527	26212838	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:10;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26212839	26212910	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26212839	26212910	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26212911	26215222	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:11;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26215223	26215294	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26215223	26215294	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26215295	26217606	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:12;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26217607	26217678	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26217607	26217678	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26217679	26219990	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:13;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26219991	26220062	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26219991	26220062	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220063	26220807	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:14;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26220808	26220842	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26220808	26220842	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26220843	26225414	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:15;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26225415	26225513	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26225415	26225478	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG01258_ch_T0000774:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26225476	26225478	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG01258_ch_T0000774;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26225514	26229486	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG01258_ch_T0000774:16;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26229487	26231343	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=280.068;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;AdditionalSources=augTM,transMap;transcript_id=HG01258_ch_T0000774;gene_id=HG01258_ch_G0000299;Parent=HG01258_ch_T0000774;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG01258_ch_T0000774:17;Name=DAZ2;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26250954	26254291	.	+	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;gene_id=HG01258_ch_G0000300;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG01258_ch_G0000300;Name=LOC105377242
HG01258_chrY	CAT	transcript	26250954	26254291	1000	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_G0000300;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG01258_ch_T0000775;Name=LOC105377242
HG01258_chrY	CAT	exon	26250954	26251132	.	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000775;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000775:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26251133	26251794	.	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000775;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01258_ch_T0000775:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26251795	26251859	.	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000775;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000775:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26251860	26254190	.	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000775;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01258_ch_T0000775:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26254191	26254291	.	+	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.1,hg002_chrY_paternal_602.1;transcript_id=HG01258_ch_T0000775;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000775;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000775:2;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26250954	26254291	1000	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_G0000300;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG01258_ch_T0000776;Name=LOC105377242
HG01258_chrY	CAT	exon	26250954	26251132	.	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000776;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000776:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26251133	26251794	.	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000776;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01258_ch_T0000776:0;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26251795	26251832	.	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000776;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000776:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26251833	26254190	.	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000776;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG01258_ch_T0000776:1;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26254191	26254291	.	+	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;alternative_source_transcripts=hg002_chrY_paternal_602.2,hg002_chrY_paternal_602.2;transcript_id=HG01258_ch_T0000776;gene_id=HG01258_ch_G0000300;Parent=HG01258_ch_T0000776;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG01258_ch_T0000776:2;Name=LOC105377242;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26355195	26376398	.	-	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;gene_id=HG01258_ch_G0000301;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG01258_ch_G0000301;Name=BPY2B
HG01258_chrY	CAT	transcript	26355195	26376398	100	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_G0000301;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG01258_ch_T0000777;Name=BPY2B
HG01258_chrY	CAT	exon	26355195	26355516	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:0;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26355517	26355610	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:0;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26355611	26355735	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:1;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26355736	26362285	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:1;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26362286	26362410	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:2;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26362392	26362410	.	-	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01258_ch_T0000777:0;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26362392	26362394	.	-	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG01258_ch_T0000777;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26362411	26363102	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:2;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26363103	26363208	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:3;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26363103	26363208	.	-	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01258_ch_T0000777:1;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26363209	26366062	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:3;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26366063	26366180	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:4;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26366063	26366180	.	-	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01258_ch_T0000777:2;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26366181	26368239	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:4;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26368240	26368358	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:5;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26368240	26368317	.	-	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG01258_ch_T0000777:3;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26368315	26368317	.	-	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG01258_ch_T0000777;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26368359	26372767	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:5;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26372768	26372904	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:6;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26372905	26375969	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:6;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26375970	26376092	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:7;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26376093	26376367	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG01258_ch_T0000777:7;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26376368	26376398	.	-	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_607.1,hg002_chrY_paternal_607.1;transcript_id=HG01258_ch_T0000777;gene_id=HG01258_ch_G0000301;Parent=HG01258_ch_T0000777;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG01258_ch_T0000777:8;Name=BPY2B;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26387377	26424180	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;gene_id=HG01258_ch_G0000302;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG01258_ch_G0000302;Name=TTTY4
HG01258_chrY	CAT	transcript	26387377	26424180	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_G0000302;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG01258_ch_T0000778;Name=TTTY4
HG01258_chrY	CAT	exon	26387377	26388377	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01258_ch_T0000778:0;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26388378	26395027	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01258_ch_T0000778:0;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26395028	26395135	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01258_ch_T0000778:1;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26395136	26396939	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01258_ch_T0000778:1;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26396940	26397015	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01258_ch_T0000778:2;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26397016	26424019	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG01258_ch_T0000778:2;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26424020	26424180	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1,hg002_chrY_paternal_608.1;transcript_id=HG01258_ch_T0000778;gene_id=HG01258_ch_G0000302;Parent=HG01258_ch_T0000778;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG01258_ch_T0000778:3;Name=TTTY4;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26507921	26509052	.	-	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;alternative_source_transcripts=hg002_chrY_paternal_611.1,hg002_chrY_paternal_611.1;gene_id=HG01258_ch_G0000303;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG01258_ch_G0000303;Name=TTTY17C
HG01258_chrY	CAT	transcript	26507921	26509052	1000	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_611.1,hg002_chrY_paternal_611.1;transcript_id=HG01258_ch_T0000779;gene_id=HG01258_ch_G0000303;Parent=HG01258_ch_G0000303;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG01258_ch_T0000779;Name=TTTY17C
HG01258_chrY	CAT	exon	26507921	26508026	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_611.1,hg002_chrY_paternal_611.1;transcript_id=HG01258_ch_T0000779;gene_id=HG01258_ch_G0000303;Parent=HG01258_ch_T0000779;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG01258_ch_T0000779:0;Name=TTTY17C;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26508027	26508992	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_611.1,hg002_chrY_paternal_611.1;transcript_id=HG01258_ch_T0000779;gene_id=HG01258_ch_G0000303;Parent=HG01258_ch_T0000779;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG01258_ch_T0000779:0;Name=TTTY17C;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26508993	26509052	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_611.1,hg002_chrY_paternal_611.1;transcript_id=HG01258_ch_T0000779;gene_id=HG01258_ch_G0000303;Parent=HG01258_ch_T0000779;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG01258_ch_T0000779:1;Name=TTTY17C;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26561316	26574421	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;gene_id=HG01258_ch_G0000304;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG01258_ch_G0000304;Name=LOC107987350
HG01258_chrY	CAT	transcript	26561316	26574421	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_G0000304;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG01258_ch_T0000780;Name=LOC107987350
HG01258_chrY	CAT	exon	26561316	26565189	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000780;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000780:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26565190	26565830	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000780;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000780:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26565831	26567995	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000780;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000780:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26567996	26573965	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000780;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000780:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26573966	26574421	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1,hg002_chrY_paternal_612.1;transcript_id=HG01258_ch_T0000780;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000780;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000780:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26561316	26574421	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_G0000304;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG01258_ch_T0000781;Name=LOC107987350
HG01258_chrY	CAT	exon	26561316	26565189	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000781;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000781:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26565190	26565830	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000781;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000781:0;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26565831	26568463	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000781;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000781:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26568464	26573965	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000781;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG01258_ch_T0000781:1;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26573966	26574421	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2,hg002_chrY_paternal_612.2;transcript_id=HG01258_ch_T0000781;gene_id=HG01258_ch_G0000304;Parent=HG01258_ch_T0000781;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG01258_ch_T0000781:2;Name=LOC107987350;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26663202	26664835	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;gene_id=HG01258_ch_G0000305;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG01258_ch_G0000305;Name=LOC101928626
HG01258_chrY	CAT	transcript	26663202	26664835	1000	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_G0000305;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG01258_ch_T0000782;Name=LOC101928626
HG01258_chrY	CAT	exon	26663202	26663645	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_T0000782;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000782:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26663646	26663782	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_T0000782;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG01258_ch_T0000782:0;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26663783	26664049	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_T0000782;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000782:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26664050	26664744	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_T0000782;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG01258_ch_T0000782:1;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26664745	26664835	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1,hg002_chrY_paternal_615.1;transcript_id=HG01258_ch_T0000782;gene_id=HG01258_ch_G0000305;Parent=HG01258_ch_T0000782;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG01258_ch_T0000782:2;Name=LOC101928626;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26672717	26683717	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;gene_id=HG01258_ch_G0000306;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG01258_ch_G0000306;Name=LOC107987240
HG01258_chrY	CAT	transcript	26672717	26683717	1000	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_G0000306;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG01258_ch_T0000783;Name=LOC107987240
HG01258_chrY	CAT	exon	26672717	26672948	.	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_T0000783;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000783:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26672949	26682743	.	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_T0000783;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG01258_ch_T0000783:0;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26682744	26682850	.	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_T0000783;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000783:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26682851	26683059	.	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_T0000783;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG01258_ch_T0000783:1;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26683060	26683717	.	+	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1,hg002_chrY_paternal_616.1;transcript_id=HG01258_ch_T0000783;gene_id=HG01258_ch_G0000306;Parent=HG01258_ch_T0000783;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG01258_ch_T0000783:2;Name=LOC107987240;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26702581	26719000	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;alternative_source_transcripts=hg002_chrY_paternal_617.1;gene_id=HG01258_ch_G0000307;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=transMap;ID=HG01258_ch_G0000307;Name=SEPTIN14P23
HG01258_chrY	CAT	transcript	26702581	26719000	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_G0000307;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG01258_ch_T0000784;Name=SEPTIN14P23
HG01258_chrY	CAT	exon	26702581	26703159	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_T0000784;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000784:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26703160	26711196	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_T0000784;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01258_ch_T0000784:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26711197	26711365	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_T0000784;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000784:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26711366	26718906	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_T0000784;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG01258_ch_T0000784:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26718907	26719000	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG01258_ch_T0000784;gene_id=HG01258_ch_G0000307;Parent=HG01258_ch_T0000784;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG01258_ch_T0000784:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26779597	26784462	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;gene_id=HG01258_ch_G0000308;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG01258_ch_G0000308;Name=GOLGA2P2Y
HG01258_chrY	CAT	transcript	26779597	26784462	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_G0000308;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG01258_ch_T0000785;Name=GOLGA2P2Y
HG01258_chrY	CAT	exon	26779597	26779639	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26779640	26779825	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26779826	26779904	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26779905	26781024	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26781025	26781376	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26781377	26781672	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26781673	26781730	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26781731	26783086	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26783087	26783161	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26783162	26783581	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26783582	26783670	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26783671	26783925	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26783926	26784114	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26784115	26784203	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26784204	26784296	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26784297	26784378	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG01258_ch_T0000785:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26784379	26784462	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1,hg002_chrY_paternal_624.1;transcript_id=HG01258_ch_T0000785;gene_id=HG01258_ch_G0000308;Parent=HG01258_ch_T0000785;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG01258_ch_T0000785:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26786461	26787991	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;gene_id=HG01258_ch_G0000309;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG01258_ch_G0000309;Name=LOC102724034
HG01258_chrY	CAT	transcript	26786461	26787991	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_G0000309;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG01258_ch_T0000786;Name=LOC102724034
HG01258_chrY	CAT	exon	26786461	26786884	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_T0000786;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000786:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26786885	26787152	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_T0000786;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG01258_ch_T0000786:0;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26787153	26787277	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_T0000786;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000786:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26787278	26787965	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_T0000786;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG01258_ch_T0000786:1;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26787966	26787991	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1,hg002_chrY_paternal_626.1;transcript_id=HG01258_ch_T0000786;gene_id=HG01258_ch_G0000309;Parent=HG01258_ch_T0000786;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG01258_ch_T0000786:2;Name=LOC102724034;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26807192	26810989	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG01258_ch_G0000310;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG01258_ch_G0000310;Name=CSPG4P1Y
HG01258_chrY	CAT	transcript	26807192	26810989	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01258_ch_T0000787;gene_id=HG01258_ch_G0000310;Parent=HG01258_ch_G0000310;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG01258_ch_T0000787;Name=CSPG4P1Y
HG01258_chrY	CAT	exon	26807192	26807914	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01258_ch_T0000787;gene_id=HG01258_ch_G0000310;Parent=HG01258_ch_T0000787;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01258_ch_T0000787:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26807915	26810917	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01258_ch_T0000787;gene_id=HG01258_ch_G0000310;Parent=HG01258_ch_T0000787;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG01258_ch_T0000787:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26810918	26810989	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG01258_ch_T0000787;gene_id=HG01258_ch_G0000310;Parent=HG01258_ch_T0000787;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG01258_ch_T0000787:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	26946393	26949180	.	+	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_638.1;gene_id=HG01258_ch_G0000311;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=augTM,transMap;ID=HG01258_ch_G0000311;Name=CDY1
HG01258_chrY	CAT	transcript	26946393	26949180	9990	+	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_G0000311;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG01258_ch_T0000788;Name=CDY1
HG01258_chrY	CAT	exon	26946393	26948112	.	+	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01258_ch_T0000788:0;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26946721	26948112	.	+	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01258_ch_T0000788:0;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26946721	26946723	.	+	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG01258_ch_T0000788;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	26948113	26948732	.	+	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG01258_ch_T0000788:0;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	26948733	26949180	.	+	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01258_ch_T0000788:1;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26948733	26948753	.	+	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01258_ch_T0000788:1;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26948751	26948753	.	+	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000788;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000788;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG01258_ch_T0000788;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	26946395	26948616	9990	+	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=299.938;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000789;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_G0000311;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG01258_ch_T0000789;Name=CDY1
HG01258_chrY	CAT	exon	26946395	26948616	.	+	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000789;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000789;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG01258_ch_T0000789:0;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	26946721	26948343	.	+	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000789;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000789;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG01258_ch_T0000789:0;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	26946721	26946723	.	+	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000789;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000789;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG01258_ch_T0000789;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	26948341	26948343	.	+	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_638.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000789;gene_id=HG01258_ch_G0000311;Parent=HG01258_ch_T0000789;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG01258_ch_T0000789;Name=CDY1;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27052773	27057668	.	+	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;gene_id=HG01258_ch_G0000312;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG01258_ch_G0000312;Name=TTTY3
HG01258_chrY	CAT	transcript	27052773	27057668	1000	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_G0000312;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG01258_ch_T0000790;Name=TTTY3
HG01258_chrY	CAT	exon	27052773	27052876	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_T0000790;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01258_ch_T0000790:0;Name=TTTY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27052877	27055074	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_T0000790;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG01258_ch_T0000790:0;Name=TTTY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27055075	27055209	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_T0000790;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01258_ch_T0000790:1;Name=TTTY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27055210	27057563	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_T0000790;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG01258_ch_T0000790:1;Name=TTTY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27057564	27057668	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1,hg002_chrY_paternal_645.1;transcript_id=HG01258_ch_T0000790;gene_id=HG01258_ch_G0000312;Parent=HG01258_ch_T0000790;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG01258_ch_T0000790:2;Name=TTTY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27353618	27356742	.	-	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;gene_id=HG01258_ch_G0000313;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG01258_ch_G0000313;Name=LOC107987349
HG01258_chrY	CAT	transcript	27353618	27356742	1000	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_G0000313;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG01258_ch_T0000791;Name=LOC107987349
HG01258_chrY	CAT	exon	27353618	27354946	.	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_T0000791;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01258_ch_T0000791:0;Name=LOC107987349;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27354947	27356481	.	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_T0000791;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG01258_ch_T0000791:0;Name=LOC107987349;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27356482	27356542	.	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_T0000791;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01258_ch_T0000791:1;Name=LOC107987349;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27356543	27356659	.	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_T0000791;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG01258_ch_T0000791:1;Name=LOC107987349;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27356660	27356742	.	-	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_665.1,hg002_chrY_paternal_665.1;transcript_id=HG01258_ch_T0000791;gene_id=HG01258_ch_G0000313;Parent=HG01258_ch_T0000791;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG01258_ch_T0000791:2;Name=LOC107987349;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27518178	27559681	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;gene_id=HG01258_ch_G0000314;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG01258_ch_G0000314;Name=REREP2Y
HG01258_chrY	CAT	transcript	27518178	27559681	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_G0000314;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG01258_ch_T0000792;Name=REREP2Y
HG01258_chrY	CAT	exon	27518178	27522767	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_T0000792;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01258_ch_T0000792:0;Name=REREP2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27522768	27532385	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_T0000792;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG01258_ch_T0000792:0;Name=REREP2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27532386	27532458	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_T0000792;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01258_ch_T0000792:1;Name=REREP2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27532459	27559278	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_T0000792;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG01258_ch_T0000792:1;Name=REREP2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27559279	27559681	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1,hg002_chrY_paternal_668.1;transcript_id=HG01258_ch_T0000792;gene_id=HG01258_ch_G0000314;Parent=HG01258_ch_T0000792;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG01258_ch_T0000792:2;Name=REREP2Y;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27571685	27571822	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1,hg002_chrY_paternal_669.1;gene_id=HG01258_ch_G0000315;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG01258_ch_G0000315;Name=LOC124900507
HG01258_chrY	CAT	transcript	27571685	27571822	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1,hg002_chrY_paternal_669.1;transcript_id=HG01258_ch_T0000793;gene_id=HG01258_ch_G0000315;Parent=HG01258_ch_G0000315;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG01258_ch_T0000793;Name=LOC124900507
HG01258_chrY	CAT	exon	27571685	27571822	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1,hg002_chrY_paternal_669.1;transcript_id=HG01258_ch_T0000793;gene_id=HG01258_ch_G0000315;Parent=HG01258_ch_T0000793;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG01258_ch_T0000793:0;Name=LOC124900507;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27725454	27733448	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;gene_id=HG01258_ch_G0000316;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG01258_ch_G0000316;Name=LOC105377244
HG01258_chrY	CAT	transcript	27725454	27733448	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_G0000316;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG01258_ch_T0000794;Name=LOC105377244
HG01258_chrY	CAT	exon	27725454	27730056	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_T0000794;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01258_ch_T0000794:0;Name=LOC105377244;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27730057	27730922	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_T0000794;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG01258_ch_T0000794:0;Name=LOC105377244;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27730923	27731089	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_T0000794;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01258_ch_T0000794:1;Name=LOC105377244;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27731090	27733217	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_T0000794;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG01258_ch_T0000794:1;Name=LOC105377244;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27733218	27733448	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1,hg002_chrY_paternal_673.1;transcript_id=HG01258_ch_T0000794;gene_id=HG01258_ch_G0000316;Parent=HG01258_ch_T0000794;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG01258_ch_T0000794:2;Name=LOC105377244;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	27748969	27765150	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;gene_id=HG01258_ch_G0000317;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG01258_ch_G0000317;Name=LOC102723869
HG01258_chrY	CAT	transcript	27748969	27765150	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_G0000317;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG01258_ch_T0000795;Name=LOC102723869
HG01258_chrY	CAT	exon	27748969	27749236	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01258_ch_T0000795:0;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27749237	27761280	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01258_ch_T0000795:0;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27761281	27761309	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01258_ch_T0000795:1;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27761310	27761403	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01258_ch_T0000795:1;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27761404	27761476	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01258_ch_T0000795:2;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	27761477	27765119	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG01258_ch_T0000795:2;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	27765120	27765150	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1,hg002_chrY_paternal_675.1;transcript_id=HG01258_ch_T0000795;gene_id=HG01258_ch_G0000317;Parent=HG01258_ch_T0000795;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG01258_ch_T0000795:3;Name=LOC102723869;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	50836766	50851467	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG01258_ch_G0000318;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000318;Name=SPRY3
HG01258_chrY	CAT	transcript	50836766	50851467	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_G0000318;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG01258_ch_T0000796;Name=SPRY3
HG01258_chrY	CAT	exon	50836766	50837106	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG01258_ch_T0000796:0;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50837107	50842740	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG01258_ch_T0000796:0;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50842741	50851467	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG01258_ch_T0000796:1;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50842847	50843713	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG01258_ch_T0000796:0;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50842847	50842849	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG01258_ch_T0000796;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	50843711	50843713	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000796;gene_id=HG01258_ch_G0000318;Parent=HG01258_ch_T0000796;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG01258_ch_T0000796;Name=SPRY3;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	50953087	51015521	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG01258_ch_G0000319;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000319;Name=VAMP7
HG01258_chrY	CAT	transcript	50953087	51015521	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01258_ch_T0000797;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961290	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50961210	50961290	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50961210	50961212	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01258_ch_T0000797;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961291	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50969858	50969995	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50972245	50972335	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	50991568	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50991569	50991636	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50991569	50991636	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50991637	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51011454	51011546	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000797:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000797:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51013635	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000797:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51013701	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000797;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000797;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01258_ch_T0000797;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01258_ch_T0000798;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961355	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50961210	50961355	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50961210	50961212	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01258_ch_T0000798;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961356	50967368	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50967369	50967426	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50967369	50967426	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50967427	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50969858	50969995	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50972245	50972335	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51011454	51011546	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000798:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000798:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51013635	51013891	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000798:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51013889	51013891	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000798;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000798;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01258_ch_T0000798;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01258_ch_T0000799;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961355	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50961210	50961355	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50961210	50961212	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01258_ch_T0000799;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961356	50967368	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50967369	50967426	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50967369	50967426	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50967427	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50969858	50969995	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50972245	50972335	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	50991568	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50991569	50991636	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50991569	50991636	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50991637	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51011454	51011546	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000799:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000799:7;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51013635	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000799:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51013701	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000799;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000799;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01258_ch_T0000799;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01258_ch_T0000800;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961376	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50961372	50961376	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50961372	50961374	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01258_ch_T0000800;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961377	50967368	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50967369	50967426	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50967369	50967426	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50967427	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50969858	50969995	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50972245	50972335	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51011454	51011546	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000800:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000800:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51013635	51013891	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000800:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51013889	51013891	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000800;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000800;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01258_ch_T0000800;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG01258_ch_T0000801;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961376	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50961372	50961376	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	50961372	50961374	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG01258_ch_T0000801;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961377	50967368	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50967369	50967426	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50967369	50967426	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50967427	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50969858	50969995	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50972245	50972335	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	50991568	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50991569	50991636	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	50991569	50991636	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50991637	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51011454	51011546	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG01258_ch_T0000801:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG01258_ch_T0000801:7;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51013635	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG01258_ch_T0000801:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51013701	51013703	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000801;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000801;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG01258_ch_T0000801;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG01258_ch_T0000802;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961355	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961356	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	50991568	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50991569	50991636	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50991637	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000802:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000802;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000802;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000802:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	50953087	51015521	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_G0000319;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG01258_ch_T0000803;Name=VAMP7
HG01258_chrY	CAT	exon	50953087	50953190	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50953191	50961200	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:0;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50961201	50961290	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50961291	50967368	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:1;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50967369	50967426	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50967427	50969857	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:2;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50969858	50969995	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50969996	50972244	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:3;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50972245	50972335	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50972336	50991568	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:4;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	50991569	50991636	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	50991637	51011453	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:5;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51011454	51011546	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51011547	51013634	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG01258_ch_T0000803:6;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51013635	51015521	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000803;gene_id=HG01258_ch_G0000319;Parent=HG01258_ch_T0000803;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG01258_ch_T0000803:7;Name=VAMP7;rna_support=False;reference_support=False
HG01258_chrY	CAT	gene	51069304	51082568	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=HG01258_ch_G0000320;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=HG01258_ch_G0000320;Name=IL9R
HG01258_chrY	CAT	transcript	51069304	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000804;Name=IL9R
HG01258_chrY	CAT	exon	51069304	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000804;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074661	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074662	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074662	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077036	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077037	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077037	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000804:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000804:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51081603	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000804:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51081601	51081603	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000804;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000804;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000804;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069361	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000805;Name=IL9R
HG01258_chrY	CAT	exon	51069361	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000805;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51079654	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079655	51079887	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079655	51079887	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079888	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000805:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000805:10;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51081603	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000805:10;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51081601	51081603	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000805;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000805;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000805;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069361	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000806;Name=IL9R
HG01258_chrY	CAT	exon	51069361	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000806;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000806:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000806:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51081603	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000806:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51081601	51081603	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000806;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000806;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000806;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069361	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000807;Name=IL9R
HG01258_chrY	CAT	exon	51069361	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000807;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077036	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077037	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077037	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51079654	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079655	51079887	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079655	51079887	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079888	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000807:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000807:10;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51081603	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000807:10;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51081601	51081603	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000807;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000807;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000807;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069361	51083100	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000808;Name=IL9R
HG01258_chrY	CAT	exon	51069361	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000808;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074661	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074662	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074662	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51079654	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000808:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079655	51083100	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000808:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079655	51079891	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000808:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51079889	51079891	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000808;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000808;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000808;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069367	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000809;Name=IL9R
HG01258_chrY	CAT	exon	51069367	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000809;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077036	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077037	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077037	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000809:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000809:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000809:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000809;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000809;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000809;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069369	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000810;Name=IL9R
HG01258_chrY	CAT	exon	51069369	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000810;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000810:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000810:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000810:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000810;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000810;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000810;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069369	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000811;Name=IL9R
HG01258_chrY	CAT	exon	51069369	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000811;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074661	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074662	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074662	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000811:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000811:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000811:9;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000811;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000811;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000811;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069371	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000812;Name=IL9R
HG01258_chrY	CAT	exon	51069371	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073081	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073082	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074625	51074775	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51074625	51074627	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000812;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000812:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000812:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000812:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000812;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000812;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000812;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069374	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000813;Name=IL9R
HG01258_chrY	CAT	exon	51069374	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069512	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069512	51069514	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000813;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000813:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000813:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000813:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000813:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000813:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000813:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000813:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000813;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000813;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000813;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069448	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000814;Name=IL9R
HG01258_chrY	CAT	exon	51069448	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069512	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069512	51069514	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000814;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51074661	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074662	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074662	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075432	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075433	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075433	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076175	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076176	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076176	51076321	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000814:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000814:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000814:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000814;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000814;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000814;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51069448	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000815;Name=IL9R
HG01258_chrY	CAT	exon	51069448	51069539	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51069496	51069539	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51069496	51069498	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000815;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51069540	51073159	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51073160	51073260	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51073160	51073260	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51073261	51074637	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51074638	51074775	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51074638	51074775	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51074776	51075204	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075205	51075316	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075205	51075316	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075317	51075439	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:3;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51075440	51075611	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51075440	51075611	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51075612	51076204	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:4;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51076205	51076321	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51076205	51076321	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51076322	51077033	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:5;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077034	51077235	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077034	51077235	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077236	51077838	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:6;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51077839	51077944	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077839	51077944	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077945	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000815:7;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000815:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51081603	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000815:8;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51081601	51081603	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000815;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000815;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000815;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	transcript	51077561	51082568	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_G0000320;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG01258_ch_T0000816;Name=IL9R
HG01258_chrY	CAT	exon	51077561	51077773	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000816:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51077589	51077773	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000816:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	start_codon	51077589	51077591	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG01258_ch_T0000816;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51077774	51079279	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000816:0;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51079280	51079364	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000816:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51079280	51079364	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000816:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	intron	51079365	51081566	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG01258_ch_T0000816:1;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	exon	51081567	51082568	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG01258_ch_T0000816:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	CDS	51081567	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG01258_ch_T0000816:2;Name=IL9R;rna_support=False;reference_support=False
HG01258_chrY	CAT	stop_codon	51082158	51082160	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG01258_ch_T0000816;gene_id=HG01258_ch_G0000320;Parent=HG01258_ch_T0000816;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG01258_ch_T0000816;Name=IL9R;rna_support=False;reference_support=False